Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000760-TA|BGIBMGA000760-PA|IPR002345|Lipocalin,
IPR006592|RNA polymerase I subunit A, N-terminal, IPR007080|RNA
polymerase Rpb1, domain 1, IPR000722|RNA polymerase, alpha subunit,
IPR007066|RNA polymerase Rpb1, domain 3, IPR007083|RNA polymerase
Rpb1, domain 4, IPR007081|RNA polymerase Rpb1, domain 5
(1191 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0348 + 24568834-24568904,24569019-24569148,24569310-245694... 789 0.0
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 619 e-177
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 610 e-174
06_03_0742 + 24027506-24027721,24028835-24029004,24029893-240300... 193 8e-49
02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,290... 159 1e-38
09_06_0230 + 21717225-21717301,21717888-21717972,21718045-217181... 136 1e-31
11_01_0048 - 361999-362220,362321-362412,362499-362561,362606-36... 120 7e-27
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435... 108 3e-23
04_04_0859 + 28805836-28805842,28806405-28806492,28807474-288075... 92 3e-18
12_01_0050 - 421227-421243,421508-421569,421574-421725,422310-42... 58 3e-08
04_01_0413 - 5485173-5485217,5485271-5485387,5485484-5485567,548... 34 0.79
11_01_0390 + 2944302-2944400,2945026-2945265,2945809-2946007,294... 31 4.2
11_06_0338 + 22479804-22480651,22480764-22482954 31 5.6
07_03_0615 + 19983003-19983238,19983297-19983558,19983651-199839... 31 5.6
05_04_0033 - 17369134-17369321,17369522-17370355,17370429-17373042 31 5.6
04_03_0589 - 17604361-17604800,17604887-17604949,17605025-176052... 31 5.6
06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850 30 9.7
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917... 30 9.7
03_03_0140 + 14771293-14771821,14772343-14772455,14772723-147728... 30 9.7
>04_04_0348 + 24568834-24568904,24569019-24569148,24569310-24569459,
24569546-24569650,24569808-24570029,24570162-24570274,
24570371-24570470,24571125-24571325,24571401-24571549,
24571624-24571765,24571851-24571991,24572098-24572286,
24572622-24572835,24573198-24573291,24573671-24573905,
24574242-24574433,24574919-24575017,24575443-24575532,
24575709-24575912,24575994-24576269,24576974-24577096,
24577453-24577608,24577686-24577802,24577878-24577957,
24578173-24578377,24578485-24578687,24578882-24578933
Length = 1350
Score = 789 bits (1950), Expect = 0.0
Identities = 493/1228 (40%), Positives = 689/1228 (56%), Gaps = 110/1228 (8%)
Query: 3 KEQYRETYVGRKISHVTFNVDSPSLIQQSAHIEVITKNLFLQDGQRVPAPHGVLDRRMGT 62
KE + E R+I + F++ S + ++QSA ++V ++ + + P P+G+LD RMG
Sbjct: 12 KEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIY--NHEMKPVPNGLLDTRMGA 69
Query: 63 NQKDANCETCGLGLAECVGHFGYIQLTLPVFHVGYFRAIITILQTICKECAKVMLPESLK 122
K C TC AEC GHFGY++L LPVF+VG+F I+ +L+ ICK C++V+L E +
Sbjct: 70 ANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSRVLLMEKDR 129
Query: 123 KSYRRKFINPEMSYLLKKNLKAVVHKKAKTFSKCPSCEAINGMVKKSSIGILKIVHEKYR 182
+ +K NP+ L K A++ K F C S G+ KK G++ I+H+
Sbjct: 130 LEFLKKMRNPKADPLQKS---AIMKKNISHF--CVSLVGSTGVAKKGRAGLI-ILHD--- 180
Query: 183 AKKPTDPIVKKVLMDFHEAKESNKEVAAMINSGLVKEMSPLEVLNLFRRIPDEDIPLLGM 242
K D ++ L D K+ ++A V+ + P VL+LF+R+ DED LL +
Sbjct: 181 CSKTLDGSTEE-LRDALSHKKEKLSISA------VRMLDPAIVLSLFKRMTDEDCELLNL 233
Query: 243 NVKLSRPEDLILTRLPVPPLCIRPSVVSDIKAGTNEDDLTMKQSEILLINDVIARHLASA 302
RPE LI+T + VPP+ IRPSV +NED +T+ I N ++ +L +
Sbjct: 234 G---DRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTG 290
Query: 303 GKCELIQEDWDYLQLHAALYINSEMSGIPLAMQPKKPGRGLVQRLKGKQGRFRGNLSGKR 362
G+ + W +LQL YINS+ +P + RGLVQRLKGK GRFRGNLSGKR
Sbjct: 291 GQFMKCFDCWQHLQLQVVEYINSDAPSLPESQH-----RGLVQRLKGKTGRFRGNLSGKR 345
Query: 363 VDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVCNGPDVHPGANY 422
+++ RTVISPDPNL+I EV +P+ +A++LTYPERV N++ LR+ + NGP HPGAN+
Sbjct: 346 TEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANF 405
Query: 423 VQQRGLKTKKYLKYGNREKIAQELKCGDVVERHLVDGDVVLFNRQPSLHKLSIMCHRAKV 482
+ Q TK +LKY +R A++LK G VVERHL DGD+VLFNRQPSLH++SIM HRA++
Sbjct: 406 IIQPD-GTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARI 464
Query: 483 QPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGSHNTAVTVIIRVSLEQ 542
P RT RFNE VC PYNADFDGDEMN+H+PQTEEAR EAL+LMG N
Sbjct: 465 MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQN------------- 511
Query: 543 NKSNLVTPRNGELLIAATQDFITGGYLITQRDTFFTKSEAQQLAACLLAGPDATMRIDMP 602
NL TP+NGE+L+A+TQDF+T +L+T++D F+ +S L C G DA ID+P
Sbjct: 512 ---NLCTPKNGEILVASTQDFLTSSFLVTRKDNFYDRSSFSLL--CSYLG-DAMENIDLP 565
Query: 603 PPAIIKPRKLWTGKQIFSLIMRPNRRCEVKANLETKGKNYTGNKD-------LCVQDSYV 655
PA+IKP +LWTGKQ+FS+++RPN +V NL K K Y K +C D +V
Sbjct: 566 TPALIKPIELWTGKQLFSVLVRPNACTKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFV 625
Query: 656 IIRNSELVCGSMDKSTLGSGTKSSIFYILLRDWGEEYAVRGMWRLARMASYYMMNRGFSF 715
RNSEL+ G + K+TLG+G K +F L+RD+ A M RLA+ ++ ++ N GFS
Sbjct: 626 YFRNSELLSGQVGKATLGNGNKDGMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSI 685
Query: 716 GIIDVTPGKKLIEAKNKLLESGYSKCDGYILEMEKGTLQCQPGCTMEETLEAVMLSELSS 775
G+ DV PG+ L + K ++ GY C I KG L+ QPGC +TLE + L+
Sbjct: 686 GVDDVQPGEHLNQEKKMKIDGGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNE 745
Query: 776 IRELAAKACFRELHPTNAPLIMAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSL 835
IRE A K C LH N+PLIM+Q GSKGS INISQM+ACVGQQ++ G+R PNGF DR+L
Sbjct: 746 IREEAGKVCMNTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTL 805
Query: 836 PHFERHSKIPAARGFVENSFYTGLTPTEFFFHTMGGREGLVDT-AVKTAETGYLQRRLVK 894
PHF +SK PAA+GFV NSFYTGLT TEFFFHTMGGREGLVDT A+ A ++ +V+
Sbjct: 806 PHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAALVLAVECFISGTVVR 865
Query: 895 SLEDL--VLQYDMTVRNA-TGEVVQ----------------FRYGSDGL----------D 925
++ + Q+ + V+ A TG + + R S G+ D
Sbjct: 866 CMKTFTALCQFYVEVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMD 925
Query: 926 PTYMEGKD-RPVDLARVLADVRAKCQDKNAEPLDGDGIVLAAEETLALDDFKTS---TDE 981
P MEGKD +P++L ++ V A C + L I+ + L+ D + +++
Sbjct: 926 PAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGCSEK 985
Query: 982 FKNELLSFLKATAGRVRALRARYAGCGRAALQLERLTLTQLVRFLRVCHHKYQRGVIEPG 1041
FK L FL+ R++ L++ R AL L+ + + G+
Sbjct: 986 FKQLLTYFLE---DRIKLLKST-----RRALLLDEDHVGERHSSFEESIAANISGISVKQ 1037
Query: 1042 TAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQG------VPRVKEIINASRNISTPI 1095
AA+ I P +T + V S I +G + V E I S P
Sbjct: 1038 LQEIINAAKKISTP--IITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPN 1095
Query: 1096 ITAEL-MQPYDQEF----ARRVKGRICT-SKLKVKPAEVTAVSAWAIKVTGEPSKSCGWL 1149
+ +L MQ + A V+ I K+K+K V + +++ L
Sbjct: 1096 LVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLL 1155
Query: 1150 NMSLQQLGRQLPAVVVKGLPQVSRAVIA 1177
L L LP V+VKG+P V RAVI+
Sbjct: 1156 -YELHHLKSMLPKVIVKGIPTVERAVIS 1182
>08_01_0364 -
3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 619 bits (1530), Expect = e-177
Identities = 365/928 (39%), Positives = 536/928 (57%), Gaps = 51/928 (5%)
Query: 14 KISHVTFNVDSPSLIQQSAHIEVITKNLFLQDGQRVPAPHGVLDRRMGTNQKDANCETCG 73
K+ V F + SP I+Q + +++ ++ G+ P P G+ D R+GT + CETC
Sbjct: 14 KVQLVQFGILSPDEIRQMSVVQIEHAET-MERGK--PKPGGLSDPRLGTIDQKIKCETCM 70
Query: 74 LGLAECVGHFGYIQLTLPVFHVGYFRAIITILQTICKECAKVMLPES-LKKSYRRKFINP 132
G+AEC GHFG+++L P+FH+G+ + +++I++ +C C+K++ E K K NP
Sbjct: 71 AGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTKFKQALKIRNP 130
Query: 133 EMSYLLKKNLKAVVHKKAKTFSKCPSCEAINGMVKKSSIGILKIVHEKYRAKKPTDPIV- 191
K LK + + K+ C + ++ ++ + +K A++P +
Sbjct: 131 ------KNRLKRI-YDACKSKKVCAGGDDLDVQEQQDTDEPVK-KRGGCGAQQPNITVDG 182
Query: 192 KKVLMDFHEAKESNKEVAAMINSGLVKEMSPLE-VLNLFRRIPDEDIPLLGMNVKLSRPE 250
K++ +F K+ N + + K++ E VLN+ +RI DED LLG+N K +RP+
Sbjct: 183 MKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPD 242
Query: 251 DLILTRLPVPPLCIRPSVVSDIKAGTNEDDLTMKQSEILLINDVIARHLASAGKCELIQE 310
+IL LP+PP +RPSV+ D + +EDDLT + + I+ N+ + R + +I E
Sbjct: 243 WMILQVLPIPPPPVRPSVMMDTSS-RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITE 301
Query: 311 DWDYLQLHAALYINSEMSGIPLAMQPK-KPGRGLVQRLKGKQGRFRGNLSGKRVDFSSRT 369
LQ H A Y ++E+ G P A Q +P + + RLK K+GR RGNL GKRVDFS+RT
Sbjct: 302 FAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSART 361
Query: 370 VISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVCNGPDVHPG---ANYV-QQ 425
VI+PDPN+ I E+GVP +A LTYPE V P N++ L+ LV GP PG A Y+ ++
Sbjct: 362 VITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRE 421
Query: 426 RGLKTKKYLKYGNREKIAQELKCGDVVERHLVDGDVVLFNRQPSLHKLSIMCHRAKVQPQ 485
G + L+Y + Q L+ G VERHL DGD VLFNRQPSLHK+SIM HR K+ P
Sbjct: 422 DGQRLD--LRYVKKSS-DQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478
Query: 486 RTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGSHNTAVTVIIRVSLEQNKS 545
TFR N V +PYNADFDGDEMNMH+PQ+ E RAE L LM
Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM----------------MVPK 522
Query: 546 NLVTPRNGELLIAATQDFITGGYLITQRDTFFTKSEAQQLAACLLAGPDATMRIDMPPPA 605
+V+P++ ++ QD + G IT+RDT K + L+ D ++ P PA
Sbjct: 523 CIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNI---LMWWEDFDGKV--PAPA 577
Query: 606 IIKPRKLWTGKQIFSLIM-RPNRRCEVKANLETKGKNYTGNKDLCVQDSYVIIRNSELVC 664
I+KPR +WTGKQ+F+LI+ +P A + TG + D+ V I EL+
Sbjct: 578 ILKPRPIWTGKQVFNLIIPKPINLIRFSA---WHSEAETG--FITPGDTMVRIEKGELLS 632
Query: 665 GSMDKSTLGSGTKSSIFYILLRDWGEEYAVRGMWRLARMASYYMMNRGFSFGIIDVTPGK 724
G++ K TLG+ T S+ +++ + G + A + + + +Y+++ GFS GI D
Sbjct: 633 GTLCKKTLGTST-GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADA 691
Query: 725 KLIEAKNKLLESGYSKCDGYILEMEKGTLQCQPGCTMEETLEAVMLSELSSIRELAAKAC 784
+ N+ + I++ L+ +PG TM E+ E + L+ R+ A +
Sbjct: 692 ATMVKINETISKAKDDVKELIMQAHDKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSA 751
Query: 785 FRELHPTNAPLIMAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKI 844
+ L +N M +GSKGS INISQM ACVGQQ + GKR+P GF DR+LPHF +
Sbjct: 752 QKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYG 811
Query: 845 PAARGFVENSFYTGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLQYD 904
P +RGFVENS+ GLTP EFFFH MGGREGL+DTAVKT+ETGY+QRRLVK++ED++++YD
Sbjct: 812 PESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIIVKYD 871
Query: 905 MTVRNATGEVVQFRYGSDGLDPTYMEGK 932
TVRN+ G+V+QF YG DG+D ++E +
Sbjct: 872 GTVRNSLGDVIQFLYGEDGMDAVWIESQ 899
Score = 89.0 bits (211), Expect = 2e-17
Identities = 46/116 (39%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 1000 LRARYAGCGRAALQLERLTLTQLVRFLRVCHHKYQRGVIEPGTAVGALAAQSIGEPGTQM 1059
LR+ +A + L+ RLT + ++ + ++ PG +G +AAQSIGEP TQM
Sbjct: 1041 LRSTFAS--KRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQM 1098
Query: 1060 TLKTFHFAGVASMNITQGVPRVKEIINASRNISTPIITAELMQPYD--QEFARRVK 1113
TL TFH+AGV++ N+T GVPR++EIIN ++ I TP ++ L + +E A+ V+
Sbjct: 1099 TLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKKKELAKNVQ 1154
>05_01_0367 -
2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 610 bits (1507), Expect = e-174
Identities = 351/891 (39%), Positives = 519/891 (58%), Gaps = 46/891 (5%)
Query: 50 PAPHGVLDRRMGTNQKDANCETCGLGLAECVGHFGYIQLTLPVFHVGYFRAIITILQTIC 109
P P G+ D RMGT + CETC G+AEC GHFG+++L P+FH+G+ + +++I++ +C
Sbjct: 85 PKPGGLSDPRMGTIDRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVC 144
Query: 110 KECAKVMLPES-LKKSYRRKFINPEMSYLLKKNLKAVVHKKAKTFSKCPSCEAINGMVKK 168
C+K++ E +K K NP K LK + + K C + ++ ++
Sbjct: 145 FNCSKILADEDDIKFKQALKIRNP------KNKLKRI-YDACKNRKICAGGDNLDVQEQQ 197
Query: 169 SSIGILKIVHEKYRAKKPTDPIV-KKVLMDFHEAKESNKEVAAMINSGLVKEMSPLE-VL 226
+ +K A++P + K++ ++ K+ N + + K++ E VL
Sbjct: 198 GTDDPVK-KRGGCGAQQPNITVDGMKMVAEYKAPKKKNDDQEQLPEPVDRKQILSAERVL 256
Query: 227 NLFRRIPDEDIPLLGMNVKLSRPEDLILTRLPVPPLCIRPSVVSDIKAGTNEDDLTMKQS 286
N+ + I DED LLG+N K +RP+ +IL LP+PP +RPSV+ D + +EDDLT + +
Sbjct: 257 NVLKHISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTSS-RSEDDLTHQLA 315
Query: 287 EILLINDVIARHLASAGKCELIQEDWDYLQLHAALYINSEMSGIPLAMQPK-KPGRGLVQ 345
I+ N+ + R + +I E LQ H A Y ++E+ G P A Q +P + +
Sbjct: 316 MIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICS 375
Query: 346 RLKGKQGRFRGNLSGKRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQW 405
RLK K+GR RGNL GKRVDFS+RTVI+PDPN+ I E+GVP +A LTYPE V P N++
Sbjct: 376 RLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIER 435
Query: 406 LRRLVCNGPDVHPG---ANYV-QQRGLKTKKYLKYGNREKIAQELKCGDVVERHLVDGDV 461
L+ LV GP PG A Y+ ++ G + L+Y + Q L+ G VERHL DGD
Sbjct: 436 LKELVEYGPHPPPGKTGAKYIIREDGQRLD--LRYVKKSS-DQHLELGYKVERHLNDGDF 492
Query: 462 VLFNRQPSLHKLSIMCHRAKVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEA 521
VLFNRQPSLHK+SIM HR K+ P TFR N V +PYNADFDGDEMNMH+PQ+ E RAE
Sbjct: 493 VLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV 552
Query: 522 LILMGSHNTAVTVIIRVSLEQNKSNLVTPRNGELLIAATQDFITGGYLITQRDTFFTKSE 581
L LM +V+P++ ++ QD + G IT+RDT K
Sbjct: 553 LELM----------------MVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDV 596
Query: 582 AQQLAACLLAGPDATMRIDMPPPAIIKPRKLWTGKQIFSLIMRPNRRCEVKANLETKGKN 641
+ L+ D ++ P PAI+KPR +WTGKQ+F+LI+ P ++ + +
Sbjct: 597 FMNI---LMWWEDFDGKV--PAPAILKPRPIWTGKQVFNLII-PK---QINLIRFSGWHS 647
Query: 642 YTGNKDLCVQDSYVIIRNSELVCGSMDKSTLGSGTKSSIFYILLRDWGEEYAVRGMWRLA 701
+ + D+ V I EL+ G++ K TLG+ T S+ +++ + G + A + +
Sbjct: 648 EAETRFITPGDTMVRIEKGELLSGTLCKKTLGTST-GSLIHVIWEEVGPDAARKFLGHTQ 706
Query: 702 RMASYYMMNRGFSFGIIDVTPGKKLIEAKNKLLESGYSKCDGYILEMEKGTLQCQPGCTM 761
+ +Y+++ GFS GI D +E N+ + + I + L+ + G T
Sbjct: 707 WLVNYWLLQNGFSIGIGDTIADAATMENINETISKAKNDVKKLIKQFRDNQLEAEAGRTT 766
Query: 762 EETLEAVMLSELSSIRELAAKACFRELHPTNAPLIMAQSGSKGSNINISQMIACVGQQAL 821
E+ E + L+ R++A + + L +N MA +GSKG+ INISQM ACVGQQ +
Sbjct: 767 MESFENRVNEVLNKARDVAGSSAEKSLSESNNLKAMATAGSKGTFINISQMTACVGQQNV 826
Query: 822 NGKRVPNGFEDRSLPHFERHSKIPAARGFVENSFYTGLTPTEFFFHTMGGREGLVDTAVK 881
GKR+P GF +R+LPHF ++ P +RGFVENS+ GLTP EFFFH MGGREGL+DTAVK
Sbjct: 827 EGKRIPFGFTNRTLPHFTKNDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 886
Query: 882 TAETGYLQRRLVKSLEDLVLQYDMTVRNATGEVVQFRYGSDGLDPTYMEGK 932
T+ETGY+QRRLVK++ED++++YD TVRN+ G+V+QF YG DG+D ++E +
Sbjct: 887 TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAIWIESQ 937
Score = 92.3 bits (219), Expect = 2e-18
Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 4/116 (3%)
Query: 1000 LRARYAGCGRAALQLERLTLTQLVRFLRVCHHKYQRGVIEPGTAVGALAAQSIGEPGTQM 1059
LR+ +A + L+ RLT + ++ + ++ PG +G +AAQSIGEP TQM
Sbjct: 1079 LRSTFAS--KRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQM 1136
Query: 1060 TLKTFHFAGVASMNITQGVPRVKEIINASRNISTPIITAELMQPYD--QEFARRVK 1113
TL TFH+AGV++ N+T GVPR++EIIN ++NI TP ++ L + +E A+ V+
Sbjct: 1137 TLNTFHYAGVSAKNVTLGVPRLREIINVAKNIKTPSLSVHLKPEVNKKKELAKNVQ 1192
>06_03_0742 + 24027506-24027721,24028835-24029004,24029893-24030052,
24030162-24030455,24031490-24031717,24031827-24032006,
24032079-24032238,24032591-24032617,24033426-24033613,
24034269-24034532,24035123-24035218,24035311-24035399,
24035473-24035620,24035842-24036051,24036141-24036440,
24037906-24038248,24038747-24038952,24039071-24039273,
24040021-24040117,24040148-24040222,24040328-24040602,
24041116-24041256,24041469-24042339,24042481-24042520,
24042605-24043050
Length = 1808
Score = 193 bits (470), Expect = 8e-49
Identities = 137/366 (37%), Positives = 195/366 (53%), Gaps = 50/366 (13%)
Query: 746 LEMEKGTLQCQPGCTMEETLEAVMLSELSSIRELAAKACF----RELHPTNAPLIMAQSG 801
L+ME + + G + L+ M SEL+++ K F R+ P N +M Q+G
Sbjct: 1029 LQMEVEKIIRRNGESATVILDRNMSSELNTLTSKVNKKVFPYGLRKPFPGNCLSLMTQTG 1088
Query: 802 SKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKIPAARGFVENSFYTGLTP 861
+KG +N++Q+ + +GQQ L GKRVP ++LP F A GF+ + F TGL P
Sbjct: 1089 AKGGLVNMTQISSLLGQQELEGKRVPRMISGKTLPCFPPWDTSSRAGGFIGDRFLTGLRP 1148
Query: 862 TEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLQYDMTVRNATGEVVQFRYGS 921
E++FH M GREGLVDTAVKT+ +GYLQR L+KSLE L + YD T F YG
Sbjct: 1149 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKSLESLKVSYDHT----------FCYGE 1198
Query: 922 DGLD---PTYMEGKDRPV-DLARVLADVRAKCQDKNAEPLDGDGIVLAAEETLALDDFKT 977
DG+D ++++ K R + D R L DK+ L+ +G + E L
Sbjct: 1199 DGVDVLKTSFLDDKFRELSDNRRALLGKLDSHNDKHL-LLNPNGYISELPEKLI------ 1251
Query: 978 STDEFKNELLSFLKATAGRVRALRARYAGCGRAALQLERLTLTQLVRFLRVCHHKYQRGV 1037
+ FLK+ R + RY + +L++ L+V KY +
Sbjct: 1252 ------ENAMEFLKSK----RNEKGRY-----------DIKEKELMKLLKV---KYISSL 1287
Query: 1038 IEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEII-NASRNISTPII 1096
++PG AVG +AAQSIGEP TQMTL TFH AG MN+T G+PR+KE++ AS ISTP +
Sbjct: 1288 VDPGEAVGVVAAQSIGEPSTQMTLNTFHLAGRGEMNVTLGIPRLKELLMTASAKISTPFM 1347
Query: 1097 TAELMQ 1102
L++
Sbjct: 1348 KCPLLE 1353
Score = 109 bits (262), Expect = 1e-23
Identities = 86/280 (30%), Positives = 141/280 (50%), Gaps = 45/280 (16%)
Query: 467 QPSLHKLSIMCHRAKVQP-QRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILM 525
+P+LHK S+M H +V P ++T R + C+ YNADFDGDEMN+H PQ E +RAEA+ ++
Sbjct: 661 EPTLHKPSMMAHVVRVLPGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIV 720
Query: 526 GSHNTAVTVIIRVSLEQNKSNLVTPRNGELLIAATQDFITGGYLITQRDTFFTKSEAQQL 585
+ NK + PR+G+ + QD I G L+T+ DTF ++ E QL
Sbjct: 721 ---------------DANKQ-YIGPRSGDAVRGLIQDHIIGAVLLTKLDTFLSREEYNQL 764
Query: 586 A-ACLLA--------GPDATMRID-----MPPPAIIKPRKLWTGKQIFSLIM------RP 625
+L+ G ++ +D PPAI KP+ LWTGKQ+ + I+ RP
Sbjct: 765 VYGSVLSSTRRSGQFGKKISIIMDDDALEPVPPAIWKPKPLWTGKQVITTILNHVTKGRP 824
Query: 626 NRRCEVKANLE-----TKGKNYTGNKDLCVQDSYVIIRNSELVCGSMDKSTLGSGTKSSI 680
E K +E + +N K + + + + ++EL+ G +DK+ G+ I
Sbjct: 825 PFTVEKKGRIEKEYLIPEERNGDKVKTINPSEQVLYVHDNELIKGMIDKAQFGN---YGI 881
Query: 681 FYILLRDWGEEYAVRGMWRLARMASYYMMNRGFSFGIIDV 720
+ + +G E A + +R+ + + GF+ G+ D+
Sbjct: 882 VHTVHELYGPETAGVLLSSFSRLFTMVLQLHGFTCGVDDL 921
Score = 109 bits (261), Expect = 2e-23
Identities = 84/251 (33%), Positives = 123/251 (49%), Gaps = 27/251 (10%)
Query: 240 LGMNVKLSRPEDLILTRLPVPPLCIRPSVVSDIKAGTNEDDLTMKQSEILLINDVIARHL 299
L ++ K E L L V P RPS+ S + G E + S++ N + + +
Sbjct: 383 LSVSEKRRGYEMFFLKNLLVAPNRFRPSISSSL--GIMEHPQNVLLSKVQESNLALQQSI 440
Query: 300 ASAGKCELIQEDWDYLQLHAALYINSEMSGIPLAMQPKKPGR------GLVQRLKGKQGR 353
A++ E+++ W LQ + + +S G+ M P K + G+ Q L+ K+G
Sbjct: 441 AASNHMEVLRR-WMDLQRNVNVLYDSS-KGLYAFMHPLKEAKNEKNANGIRQLLEKKEGI 498
Query: 354 FRGNLSGKRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVCNG 413
R + GKRV+++ R+VISPDP L + E+G+P A LTYPE+V P N + L+ + NG
Sbjct: 499 LRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPVFATRLTYPEKVTPWNARKLQEAINNG 558
Query: 414 PDVHPGANYVQQRGLKTKKYLKYGNREKIAQEL--------------KC---GDVVERHL 456
D+HPGA + + K R IA+ L KC VV RHL
Sbjct: 559 ADIHPGATHYRDNNNMYKLQAAPPKRRAIAKMLPASRGSISQPGKDPKCEFESKVVYRHL 618
Query: 457 VDGDVVLFNRQ 467
DGDVVL NRQ
Sbjct: 619 QDGDVVLVNRQ 629
Score = 62.1 bits (144), Expect = 3e-09
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 45 DGQRVPAPHGVLDRRMGTNQKDANCETCGLGLAECVGHFGYIQLTLPVFHVGYFRAIITI 104
D + P P G+LD MG C++CG C GHFG+I+L P+F+ F ++ +
Sbjct: 106 DAKNCPVPGGLLDPAMGPTNDTDTCKSCGQQSIRCPGHFGHIELAKPLFNPLLFMSLKNL 165
Query: 105 LQTICKECAKVMLPESLKKSY 125
LQ C C K L + Y
Sbjct: 166 LQVTCFHCHKFRLNKEQADRY 186
>02_01_0399 -
2905026-2905406,2905522-2905630,2905809-2907475,
2907650-2907790,2907870-2908043,2908577-2908851,
2909592-2909755,2910409-2910536,2910628-2910734,
2911747-2911880,2912266-2912441,2912530-2914257,
2915084-2915239,2915328-2915486,2915581-2915751,
2915931-2916047,2916417-2916473,2916565-2916680,
2916790-2916916,2917862-2917945
Length = 2056
Score = 159 bits (386), Expect = 1e-38
Identities = 194/740 (26%), Positives = 314/740 (42%), Gaps = 90/740 (12%)
Query: 218 KEMSPLEVLNLFRRIPDEDIPLLGMNVKLSRPEDLILTRLPVPPLCIRPSVVSDIKAGTN 277
+ + P E LN+ ++IP+E L +++ ++ LPVPP C+ +D ++ +
Sbjct: 218 RTLLPEEALNILKKIPEETKRKLAARGYIAQ-SGYVMKYLPVPPNCLYIPEFTDGQSIMS 276
Query: 278 EDDLTMKQSEILLINDVIARHLASAGKCELIQEDWDYLQLHAALYINSEMSGIPLAMQPK 337
D ++L + I + A + E + + LQL A YI+ + G Q
Sbjct: 277 YDISISLLKKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIH--LRGTTRGPQDN 334
Query: 338 KPGRGLV---QRLKGKQG--RFRGNLSGKRVDFSSRTVISPDPNLQIQEVGVPVHVAKIL 392
+ L KQ + R K FSSR+V++ DP + + +G+P VAK +
Sbjct: 335 TKRFAISTDPSALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRI 394
Query: 393 TYPERVFPANLQWLRRLVCNGPDVHPGANYVQQRGLKTKKYLKYGNREKIAQELKCGDVV 452
T+ E+V NL L+ +V G + R + + G++ LK G +
Sbjct: 395 TFEEQVTDINLNRLQEIVDKGL-------CLTYRDGQATYAITVGSKGHTT--LKVGQTI 445
Query: 453 ERHLVDGDVVLFNRQPSLHKLSIMCHRAKVQPQRTFRFNECVCTPYNADFDGDEMNMHLP 512
R +VDGDVV NR PS HK S+ R V T + N +C P+ ADFDGD ++++ P
Sbjct: 446 SRRIVDGDVVFLNRPPSTHKHSLQAFRVYVHEDHTVKINPLICAPFAADFDGDCVHIYYP 505
Query: 513 QTEEARAEALILMGSHNTAVTVIIRVSLEQNKSNLVTPRNGELLIAATQDFITGGYLITQ 572
Q+ A+AEAL L S+E+ L + +G++ + D + ++
Sbjct: 506 QSLAAKAEALELF-------------SVEK---QLTSSHSGKVNLQLVSDSLLALKHMSS 549
Query: 573 RDTFFTKSEAQQLAACLLAGPDATMRIDMPPPAIIKPRKLWTGKQIFSLIMRPNRRCEVK 632
R T +K A QLA + +P PA+IK + WT QI V+
Sbjct: 550 R-TMLSKEAANQLAMLVTC--------SLPDPAVIKSKPYWTISQI------------VQ 588
Query: 633 ANLETKGKNYTGNKDLCVQDSYVIIRNSELVCGSMDKSTLGSGTKSSIFYILLRDWGEEY 692
L K L Q ++R+S ++ +DK ++ + + S + Y L G
Sbjct: 589 GALP---------KALTSQGDKHVVRDSTIIKLDLDKESVQT-SFSDLVYSTLSVKGPGE 638
Query: 693 AVRGMWRLARMASYYMMNRGFSFGIIDVTPGKKLIEAKNKLLESGYSKCDGYILEMEKGT 752
A++ + L + ++ GFS + D K L+E K +E ILE
Sbjct: 639 ALQFLNVLQPLLMELILLDGFSVSLQDFNVPKVLLEEAQKNIEK-----QSLILE----- 688
Query: 753 LQCQPGCTMEETLEAVMLSELSSIRELAAKACFRELHPTNAPLIMAQSGSKGSNINISQM 812
Q + +E + + L I++ + + H LI +S S S + Q
Sbjct: 689 ---QSRFAENQVVEMRVDNNLKDIKQQISDFVVKRSH--LGLLIDPKSDSSVS--KVVQQ 741
Query: 813 IACVGQQAL-NGKRVPNGF-EDRSLPHFERHSKI-----PAARGFVENSFYTGLTPTEFF 865
+ VG Q GK ED +H + P A G V +S++ GL P E
Sbjct: 742 LGFVGLQLYREGKFYSRRLVEDCYYTFVNKHPAVREEHSPEAYGLVRSSYFHGLNPYEEL 801
Query: 866 FHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLQYDMTVRNATGE-VVQFRY-GSDG 923
H + RE +V ++ E G L + L+ L D+V+ YD TVRN + ++Q Y D
Sbjct: 802 VHAISTREAIVRSSRGLTEPGTLFKNLMALLRDVVICYDGTVRNVCSKSIIQLNYTEDDA 861
Query: 924 LDPTYMEGKDRPVDLARVLA 943
LD G PV + A
Sbjct: 862 LDFPSAIGPGEPVGVLAATA 881
Score = 50.4 bits (115), Expect = 8e-06
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 60 MGTNQKDANCETCGLGL-AECVGHFGYIQLTLPVFHVGYFRAIITILQTICKECAKV 115
+G + CE+CG +C GHFGYI+L +P++H + + IL +C +C +V
Sbjct: 49 LGLPLETGKCESCGASENGKCEGHFGYIELPVPIYHPCHVTELRQILNVVCLKCLRV 105
>09_06_0230 +
21717225-21717301,21717888-21717972,21718045-21718165,
21718244-21718368,21718940-21718984,21719082-21719345,
21720067-21720111,21720182-21720212,21721644-21721693,
21722433-21724310,21724406-21724564,21724821-21724939,
21726917-21727059,21727670-21727735,21728184-21728317,
21728454-21728591,21728927-21729186,21729295-21729406,
21730727-21730909
Length = 1344
Score = 136 bits (328), Expect = 1e-31
Identities = 155/604 (25%), Positives = 258/604 (42%), Gaps = 75/604 (12%)
Query: 361 KRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVCNGPDVHPGA 420
KR D + R+++ DP + + E+G+P +A L E+V N + + L CN +
Sbjct: 310 KRSDNAFRSIMVGDPKINLNEIGIPTDLALNLVVSEQVSFYNFETIN-LKCNLHLLTKEV 368
Query: 421 NYVQQRGLKTKKYLKYGNREKIAQELKCGDVVERHLVDGDVVLFNRQPSLHKLSIMCHRA 480
V++ G +++ N+ L+ GD+ R L DGD+VL NR PS+H+ S++ A
Sbjct: 369 LLVRRNGKLI--FVRKANK------LEIGDIAYRLLQDGDLVLVNRPPSVHQHSLIALSA 420
Query: 481 KVQP-QRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGSHNTAVTVIIRVS 539
K+ P Q N C P+ DFDGD ++ ++PQT ++R E L G VS
Sbjct: 421 KLLPIQSAVAINPLCCDPFKGDFDGDCLHGYVPQTLQSRVE---LDG----------LVS 467
Query: 540 LEQNKSNLVTPRNGELLIAATQDFITGGYLITQRDTFFTKSEAQQL-AACLLAGPDATMR 598
L ++ ++G L++ T D + + +T D F K+E QQL C P
Sbjct: 468 L---SGQMLNAQDGRSLVSLTHDSLAAAHQLTSADVFLQKAEFQQLQLLCSSISP----- 519
Query: 599 IDMPPPAIIKPR----KLWTGKQIFSLIMRPNRRCEVKANLETKGKNYTGNKDLCVQDSY 654
P P+++K LWTGKQ+F +++ L K C S+
Sbjct: 520 --TPEPSVVKSANFQGSLWTGKQLFGMLLPSGMNISFDQKLHIKDSEVL----TCSSGSF 573
Query: 655 VIIRNSELVCGSMDKSTLGSGTKSSIFYILLRDWGEEY-AVRGMWRLARMASYYMMNRGF 713
+ N+ V M K G+K+ F +D E+ ++G+ ++ +Y+ + +
Sbjct: 574 WLQNNTSSVFSVMFKE---YGSKALEFLSSTQDVLCEFLTMKGL--SVSLSDFYLFSDHY 628
Query: 714 SFGIID------VTPGKKLIEAKNKLLES-GYSKCDGYILEMEKGTLQCQPGCT-MEETL 765
S + + ++ + K LL + Y Q T + +
Sbjct: 629 SRKKLSEEIHLALDEAEEAFQIKQILLNTVSIPNLKHYDGPDNLSNSHGQSDFTQVSLPI 688
Query: 766 EAVMLSELSSIRELAAKACFRELHPTNAPLIMAQSGSKGSNINISQMIACVGQQALNGK- 824
++ S+ K + + N+ + M SGSKGS + Q ACVG Q
Sbjct: 689 IKSSITGFKSVFNDLLKMVLQHVSKDNSMMAMINSGSKGSVLKFVQQTACVGLQLPASTF 748
Query: 825 --RVP--------NGFEDRSLPHFERHSKIPAARGF---VENSFYTGLTPTEFFFHTMGG 871
R+P N + + S+ A + + NSF GL P E H + G
Sbjct: 749 PFRIPSELSCVSWNRQKSLNCEITNNTSECMAGQNMYAVIRNSFLDGLNPLECLLHAISG 808
Query: 872 REGLVDTAVKTAETGYLQRRLVKSLEDLVLQYDMTVRNATG-EVVQFRYG-SDGLDPTY- 928
R G L R+L+ L D + YD TVR++ G ++VQF Y +DG++ +
Sbjct: 809 RANFFSENADV--PGTLTRKLMYHLRDTYVAYDGTVRSSYGRQIVQFSYDTADGMNNDHD 866
Query: 929 MEGK 932
+EG+
Sbjct: 867 LEGE 870
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 55 VLDRRMGTNQKDANCETCGL-GLAECVGHFGYIQLTLPVFHVGYFRAIITILQTICKECA 113
V + ++G C TCG + +C GHFG I+L V + + ++ +L IC C
Sbjct: 68 VTNAKLGLPNGAPQCATCGSQSVRDCDGHFGVIKLAATVHNPCFIEEVVQLLNQICPGCL 127
Query: 114 KVMLPESLKKS 124
+ KK+
Sbjct: 128 TLKQNGDTKKT 138
>11_01_0048 -
361999-362220,362321-362412,362499-362561,362606-362717,
363285-364090,368545-368806
Length = 518
Score = 120 bits (289), Expect = 7e-27
Identities = 77/168 (45%), Positives = 93/168 (55%), Gaps = 32/168 (19%)
Query: 347 LKGKQGRFRGNLSGKRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWL 406
LK K+ RGNL GKRVDFS+ +P +A LTYPE V P N Q
Sbjct: 373 LKAKERSSRGNLMGKRVDFSA----------------LPWSIALNLTYPETVTPYNFQGA 416
Query: 407 RRLVCNGPDVHPGANYVQQRGLKTKKYLKYGNREKIAQELKCGDVVERHLVDGDVVLFNR 466
+ ++ G YV++R T +YL+ G VERHL DGD VLFNR
Sbjct: 417 KYIIW-GDAQRLDLCYVKKR---TDQYLELGYN------------VERHLDDGDFVLFNR 460
Query: 467 QPSLHKLSIMCHRAKVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQT 514
QPSLHK+ IM HR K+ P TF N +PYNADFDGDEMNMH+PQ+
Sbjct: 461 QPSLHKMYIMGHRIKIMPYSTFHLNLSATSPYNADFDGDEMNMHVPQS 508
>01_07_0290 -
42542201-42542359,42542443-42542551,42542729-42543516,
42543601-42543744,42543840-42544013,42544056-42544369,
42544467-42544636,42544916-42545043,42545125-42545185,
42545473-42545642,42545783-42547387,42547479-42547631,
42547747-42547905,42548066-42548236,42548357-42548404,
42548509-42548624,42548885-42549029,42549122-42549220
Length = 1570
Score = 108 bits (259), Expect = 3e-23
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 14/306 (4%)
Query: 218 KEMSPLEVLNLFRRIPDEDIPLLGMNVKLSRPED-LILTRLPVPPLCIRPSVVSDIKAGT 276
+ + P EV N+ ++IP+E L + + P+D IL+ L VPP C+R S V D +
Sbjct: 187 RPLLPEEVQNIIKKIPEETRRWLSVRGYI--PQDGFILSYLCVPPNCLRVSNVLDGNTFS 244
Query: 277 NEDDLT-MKQSEILLINDVIARHLASAGKCELIQEDWDYLQLHAALYINSEMSGIPLAMQ 335
T + + + I + + S+ + + D LQ+ A YIN + G
Sbjct: 245 CSGTSTNLLRKALRKIQQIRGSRIGSSNI--QVDQVADDLQVDVANYIN--LGGTTKG-H 299
Query: 336 PKKPGRGLVQRLKGKQGRFRGNLSGKRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYP 395
++ KQ + + K FSSR VI+ DP + + VGVP VAK ++
Sbjct: 300 GDDTFTSQPTAMQWKQ-KMKTLFISKSSSFSSRGVITGDPYIGLNVVGVPEEVAKRMSVE 358
Query: 396 ERVFPANLQWLRRLVCNGPDVHPGANYVQQRGLKTKKYLKYGNREKIAQELKCGDVVERH 455
E+V N+ L+ ++ G + Y + N K LK G++V R
Sbjct: 359 EKVTDHNIAQLQDMMNKGLCL----TYTDANSITYSLDAGKDNPNKKHTILKVGEIVNRR 414
Query: 456 LVDGDVVLFNRQPSLHKLSIMCHRAKVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTE 515
+ DGD+V NR PS K S+ +V T + N +C P ADFDGD + + P++
Sbjct: 415 VFDGDIVFLNRPPSTDKHSVEAFYVQVHNDHTIKINPLICDPLGADFDGDCVQIFYPRSL 474
Query: 516 EARAEA 521
ARAEA
Sbjct: 475 SARAEA 480
Score = 50.4 bits (115), Expect = 8e-06
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 60 MGTNQKDANCETCGLG-LAECVGHFGYIQLTLPVFHVGYFRAIITILQTICKECAKV 115
+G + +C++CG + EC GHF +I+L +P+FH + + IL IC C K+
Sbjct: 60 LGLPLQVGSCQSCGSNAIEECEGHFRFIELPMPIFHPSHVTELSQILNLICLRCLKI 116
Score = 44.8 bits (101), Expect = 4e-04
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 849 GFVENSFYTGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLQYDMTVR 908
G V +S Y GL P E H++ RE ++ + E G L + ++ L D+ YD ++R
Sbjct: 717 GTVRSSIYHGLNPYEALLHSICEREKIMRASKGLVEPGSLFKNMMSRLRDVTACYDGSIR 776
Query: 909 NATGEVVQFRYGS 921
++G +V ++GS
Sbjct: 777 TSSGNLV-LQFGS 788
>04_04_0859 +
28805836-28805842,28806405-28806492,28807474-28807558,
28807638-28807763,28807819-28807968,28808497-28808541,
28808612-28808875,28809843-28809887,28810395-28810430,
28812048-28812816,28813063-28813925,28814024-28814182,
28814440-28814558,28815356-28815417,28816677-28816805,
28817395-28817460,28817757-28817890,28818025-28818162,
28818630-28818889,28818996-28819107,28819590-28819675,
28820655-28820735,28822841-28822928,28823222-28823260,
28823847-28823964,28824063-28824130,28824884-28824981,
28825238-28825397,28825691-28825816,28825876-28825945,
28826046-28826449
Length = 1664
Score = 91.9 bits (218), Expect = 3e-18
Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 36/265 (13%)
Query: 361 KRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVCNGPDVHPGA 420
KR D + R+++ DP + + E+G+P+ +A L E+V N + + L CN +
Sbjct: 311 KRSDNAFRSIMVGDPKINLNEIGIPMGLALNLVVSEQVSSYNFETI-NLKCNLHLLTKEV 369
Query: 421 NYVQQRGLKTKKYLKYGNREKIAQELKCGDVVERHLVDGDVVLFNRQPSLHKLSIMCHRA 480
V++ G L + + A +L+ GD+ R L DGD+VL N PS+H+ S++ A
Sbjct: 370 LLVRRNG-----NLIFVRK---ANQLEIGDIAYRLLQDGDLVLVNSPPSVHQHSLIALSA 421
Query: 481 K-VQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGSHNTAVTVIIRVS 539
K + Q N C P+ DFDGD ++ ++PQ ++R E L+G
Sbjct: 422 KLLSTQSAVSINPLCCDPFKGDFDGDCLHGYIPQCLQSRIELEELVGL------------ 469
Query: 540 LEQNKSNLVTPRNGELLIAATQDFITGGYLITQRDTFFTKSEAQQLAACLLAGPDATMRI 599
L+ ++G L++ T D + + +T D F K+E QQL L + T
Sbjct: 470 ----SGQLLNQQDGRSLVSLTHDSLAAAHQLTNADVFLEKAEFQQL-QMLSSSISLT--- 521
Query: 600 DMPPPAIIKPRK----LWTGKQIFS 620
P P++ K LWT +FS
Sbjct: 522 --PMPSVFKSTNSQGPLWTDLYLFS 544
Score = 57.6 bits (133), Expect = 6e-08
Identities = 49/149 (32%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Query: 792 NAPLIMAQSGSKGSNINISQMIACVGQQALNGK---RVPNGFEDRSLP-HFERHSKIPAA 847
N+ + M SGSKGS + Q ACVG Q K R+P+ S H R+ +I
Sbjct: 634 NSMMTMINSGSKGSVLKFVQQTACVGLQLPASKFPFRIPSQLSCVSWNRHKSRNCEITDG 693
Query: 848 RG----------FVENSFYTGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLE 897
V NSF GL P E H + GR G L R+L+ L
Sbjct: 694 TSECVGGQDMYAVVRNSFLDGLNPLECLLHAISGRANFFSENADV--PGTLTRKLMYHLR 751
Query: 898 DLVLQYDMTVRNATG-EVVQFRYG-SDGL 924
D + YD TVR++ G ++V+F Y +DG+
Sbjct: 752 DTYVAYDGTVRSSYGQQIVRFSYDTADGM 780
Score = 31.5 bits (68), Expect = 4.2
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Query: 55 VLDRRMGTNQKDANCETCGL-GLAEC----------VGHFGYIQLTLPVFHVGYFRAIIT 103
V + ++G C TCG + +C +GHFG I+L V + + ++
Sbjct: 74 VTNAKLGLPNGAPQCATCGSRSIRDCDGKKKLTGKLLGHFGVIKLAATVHNSYFIEEVVQ 133
Query: 104 ILQTICKECAKVMLPESLKKS 124
+L IC C + KK+
Sbjct: 134 LLNQICPGCLTLKQNGDTKKA 154
>12_01_0050 -
421227-421243,421508-421569,421574-421725,422310-423115,
424059-424359
Length = 445
Score = 58.4 bits (135), Expect = 3e-08
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 347 LKGKQGRFRGNLSGKRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQ 404
LK K+G RGNL GKRVDFS+RTVI+PD N+ + + LTYPE V P N +
Sbjct: 386 LKAKKGSIRGNLMGKRVDFSARTVITPDSNI---TMNCAMEYCFDLTYPETVTPYNFE 440
>04_01_0413 -
5485173-5485217,5485271-5485387,5485484-5485567,
5485741-5486052
Length = 185
Score = 33.9 bits (74), Expect = 0.79
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 887 YLQRRLVKSLEDLVLQYD-MTVRNATGEVVQFRYGSDGLDPTYMEGKDRPVDLARVLADV 945
+L+ LV ED VL+Y+ VR E V GS G DP + K++ ++ V+ V
Sbjct: 49 FLENLLVYENEDFVLEYEGKVVRYGGDEAVSAGGGSRGEDPVMEKEKEKEKEVDVVMKKV 108
Query: 946 --RAKCQDKN--AEPL-DGDGI 962
+ K +KN A PL G G+
Sbjct: 109 VDKEKMDEKNEAAAPLVKGKGV 130
>11_01_0390 +
2944302-2944400,2945026-2945265,2945809-2946007,
2946423-2946605,2947307-2947380,2947777-2947857,
2948501-2948512
Length = 295
Score = 31.5 bits (68), Expect = 4.2
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 904 DMTVRNATGEVVQFRYGSDGLDPTYMEGKDRPVDLARV 941
++ +R G+V Q S G+ P Y+ ++ PVD +R+
Sbjct: 181 NLIIRKRGGQVAQKHLSSSGVHPDYLFERNTPVDFSRI 218
>11_06_0338 + 22479804-22480651,22480764-22482954
Length = 1012
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 965 AAEETLALDDFKTSTDEFKNELLSFLKATAGRVRALR-ARYAGCGRA--ALQLERLTLTQ 1021
A E AL+D D NE+L +L AT +R + A AG G+ A++L R Q
Sbjct: 153 AQVEAGALNDHLVGIDSMANEMLRWLMATDKGLRVMAIAGPAGIGKTTLAMELHRRLRCQ 212
Query: 1022 LVRFLRVCH 1030
+ CH
Sbjct: 213 TQEYYFQCH 221
>07_03_0615 +
19983003-19983238,19983297-19983558,19983651-19983906,
19983982-19984044,19984131-19984570
Length = 418
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/78 (29%), Positives = 33/78 (42%)
Query: 353 RFRGNLSGKRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVCN 412
R R + VD +R V+ +Q G+PV V + LT R+ + LR L C
Sbjct: 157 RHRDQDFARAVDDINRVVVDGSTTIQRLGAGIPVPVEEHLTTYTRMVESMRSILRVLTCR 216
Query: 413 GPDVHPGANYVQQRGLKT 430
DV VQ+ + T
Sbjct: 217 ADDVARADAAVQRPPVPT 234
>05_04_0033 - 17369134-17369321,17369522-17370355,17370429-17373042
Length = 1211
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 386 VHVAKILTYPERVFPANLQWLRRLVCNGPDVHPGANYVQQRGLKTKK----YLKYGNREK 441
V V I+ + V LQ LR L+C P V G+N +Q L KK YL + N K
Sbjct: 553 VRVESIIQHKPSV--CKLQHLRTLICIDPLVDVGSNIFEQVVLNLKKLQVLYLSFYNTRK 610
Query: 442 IAQEL 446
+ + +
Sbjct: 611 LPESI 615
>04_03_0589 -
17604361-17604800,17604887-17604949,17605025-17605280,
17605373-17605634,17605739-17605885,17606118-17606236,
17606373-17606531,17606911-17606947,17607023-17607174
Length = 544
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/78 (29%), Positives = 33/78 (42%)
Query: 353 RFRGNLSGKRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVCN 412
R R + VD +R V+ +Q G+PV V + LT R+ + LR L C
Sbjct: 283 RHRDQDFARAVDDINRVVVDGSTTIQRLGAGIPVPVEEHLTTYTRMVESMRSILRVLTCR 342
Query: 413 GPDVHPGANYVQQRGLKT 430
DV VQ+ + T
Sbjct: 343 ADDVARADAAVQRPPVPT 360
>06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850
Length = 1173
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 119 ESLKKSYRRKFINPEMSYLLKKNLKAVVHKKAKTFSK 155
ESL K RRKF+ EMSY L++ + KK + F+K
Sbjct: 201 ESLSKDSRRKFLWEEMSY-LERWWRDAPRKKQEAFTK 236
>03_05_0697 + 26888791-26888861,26890468-26890579,26891561-26891757,
26892215-26892266,26893530-26893795,26894007-26894229,
26895154-26895327,26895408-26895485,26895566-26895817,
26896138-26898204,26899477-26901322,26901474-26901574,
26902179-26902535,26902681-26902799,26903558-26903559,
26903630-26903662,26903709-26903841,26904285-26904537,
26905688-26905912,26906401-26906466,26907373-26907471,
26908528-26908545,26908546-26908893,26909878-26910354
Length = 2522
Score = 30.3 bits (65), Expect = 9.7
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 221 SPLEVLNLFRRIPDEDIPLLGMNVKLSRPEDLI--LTRLPVPPLCIRPSVVSDIKAGTNE 278
SP L F R P IP + LS + L+ R+ P CIR + +++ A E
Sbjct: 1461 SPPHKLRSFSRWPRYKIPRAARSGNLSLDKVLVEFFFRVDATPCCIRHATLTEDDATLTE 1520
Query: 279 DD----LTMKQSEI 288
DD LT K S +
Sbjct: 1521 DDPANGLTFKMSRL 1534
>03_03_0140 +
14771293-14771821,14772343-14772455,14772723-14772830,
14772931-14772973,14773454-14773593,14774216-14774446
Length = 387
Score = 30.3 bits (65), Expect = 9.7
Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 913 EVVQFRYGSDG--LDPTYMEGKDRPVD-LARVLADVRAKCQDKNAEPLDGDGIVLAAEET 969
E+++ + +G +DP +G R + ++R + ++K +++ A+ DGD +++
Sbjct: 259 EILRSKDSKNGTLVDPCAPKGYSRIKEVISRPSSASKSKLENQFADSGDGDFTFFGLKQS 318
Query: 970 LALDDFKTSTDEFKNELLSFLK 991
+L DF + ++F N+ LS L+
Sbjct: 319 SSLSDFVLAGEQFCNKDLSTLR 340
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,384,800
Number of Sequences: 37544
Number of extensions: 1468024
Number of successful extensions: 3064
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2980
Number of HSP's gapped (non-prelim): 60
length of query: 1191
length of database: 14,793,348
effective HSP length: 90
effective length of query: 1101
effective length of database: 11,414,388
effective search space: 12567241188
effective search space used: 12567241188
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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