Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000760-TA|BGIBMGA000760-PA|IPR002345|Lipocalin,
IPR006592|RNA polymerase I subunit A, N-terminal, IPR007080|RNA
polymerase Rpb1, domain 1, IPR000722|RNA polymerase, alpha subunit,
IPR007066|RNA polymerase Rpb1, domain 3, IPR007083|RNA polymerase
Rpb1, domain 4, IPR007081|RNA polymerase Rpb1, domain 5
(1191 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-2217|AAF48509.2| 1304|Drosophila melanogaster CG17209-P... 841 0.0
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 594 e-169
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 592 e-169
BT030273-1|ABN49412.1| 395|Drosophila melanogaster IP18441p pro... 569 e-161
AE013599-1910|AAF58234.1| 1642|Drosophila melanogaster CG10122-P... 361 4e-99
Y09103-1|CAA70321.1| 1644|Drosophila melanogaster largest subuni... 350 8e-96
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 323 1e-87
M11798-1|AAA28863.1| 471|Drosophila melanogaster protein ( Dros... 263 1e-69
AY121632-1|AAM51959.1| 542|Drosophila melanogaster GM01935p pro... 80 2e-14
BT001379-1|AAN71134.1| 550|Drosophila melanogaster GH02702p pro... 34 1.0
AE014298-1672|AAN09295.1| 550|Drosophila melanogaster CG2446-PE... 34 1.0
AE014298-1671|AAN09294.1| 550|Drosophila melanogaster CG2446-PD... 34 1.0
AE014298-1670|AAG22344.1| 550|Drosophila melanogaster CG2446-PC... 34 1.0
AE014298-1669|AAF48080.1| 550|Drosophila melanogaster CG2446-PB... 34 1.0
AE014298-1668|AAF48081.1| 550|Drosophila melanogaster CG2446-PA... 34 1.0
>AE014298-2217|AAF48509.2| 1304|Drosophila melanogaster CG17209-PA
protein.
Length = 1304
Score = 841 bits (2081), Expect = 0.0
Identities = 404/627 (64%), Positives = 484/627 (77%), Gaps = 21/627 (3%)
Query: 1 MPKEQYRETYVGRKISHVTFNVDSPSLIQQSAHIEVITKNLFLQDGQRVPAPHGVLDRRM 60
MPKEQ+R + + +KISHV F + IQQ A + +I+KNL+ QR P P+GVLDRRM
Sbjct: 1 MPKEQFRASALNKKISHVQFGISGADEIQQEALVRIISKNLY--QAQRQPVPYGVLDRRM 58
Query: 61 GTNQKDANCETCGLGLAECVGHFGYIQLTLPVFHVGYFRAIITILQTICKECAKVMLPES 120
G + KDA CETCG GL EC+GHFGY+ L LPVFH+G+FR+ I ILQ ICK CA VML
Sbjct: 59 GISTKDAMCETCGQGLNECIGHFGYLDLALPVFHIGHFRSTINILQMICKVCAHVMLKPE 118
Query: 121 LKKSYRRKFINPEMSYLLKKNLKAVVHKKAKTFSKCPSCEAINGMVKKSSIGILKIVHEK 180
++ Y +K NP SYL KK L + KAK +KCP C + NG VKK G+LKI+H+
Sbjct: 119 DRQLYEKKLHNPNFSYLGKKALHVQMLAKAKKVTKCPHCGSPNGGVKKGP-GLLKILHDP 177
Query: 181 YRAKKPTDPIVKKVLMDFHEAKESNKEVAAMI-NSGLVKEMSPLEVLNLFRRIPDEDIPL 239
Y+ +K D + + + + ++N+++ + + N +E++PL VL+LF +IP D+ L
Sbjct: 178 YKGRK-MDSLFTSNMNEMLRSTQTNRDLNSTLGNYSTAEELTPLMVLDLFEQIPQRDVAL 236
Query: 240 LGMNVKLSRPEDLILTRLPVPPLCIRPSVVSDIKAGTNEDDLTMKQSEILLINDVIARHL 299
LGM + P+ LI+TR+ VPP CIRPSV+S++KAGT EDDLTMKQSEILLINDVI RH+
Sbjct: 237 LGMCSHDAHPKHLIVTRVFVPPACIRPSVLSEVKAGTTEDDLTMKQSEILLINDVIQRHM 296
Query: 300 ASAGKCELIQEDWDYLQLHAALYINSEMSGIPLAMQPKKPGRGLVQRLKGKQGRFRGNLS 359
A+ GK ELI EDWD+LQLH ALY +SE+SGIP+ M PKK RG+VQRLKGKQGRFR NLS
Sbjct: 297 ATGGKIELIHEDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLS 356
Query: 360 GKRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVCNGPDVHPG 419
GKRVDFS RTVISPDPNL I +VGVPV VAKILTYPERV PAN++ +R LV NGP +HPG
Sbjct: 357 GKRVDFSGRTVISPDPNLMINQVGVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPG 416
Query: 420 ANYVQQRGLKTKKYLKYGNREKIAQELKCGDVVERHLVDGDVVLFNRQPSLHKLSIMCHR 479
ANYVQQRG KKYL YGNREK+AQELKCGDVVERHL DGD+VLFNRQPSLHK+SIMCHR
Sbjct: 417 ANYVQQRGSSFKKYLAYGNREKVAQELKCGDVVERHLRDGDIVLFNRQPSLHKMSIMCHR 476
Query: 480 AKVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGSHNTAVTVIIRVS 539
AKVQPQRTFRFNEC CTPYNADFDGDEMN+HLPQTEEARAEALILMG
Sbjct: 477 AKVQPQRTFRFNECACTPYNADFDGDEMNLHLPQTEEARAEALILMG------------- 523
Query: 540 LEQNKSNLVTPRNGELLIAATQDFITGGYLITQRDTFFTKSEAQQLAACLLAGPDATMRI 599
N+SNLVTP+NGE+LIAATQDFITGGYL+TQ++ F TK EA QLAAC LA D+TM I
Sbjct: 524 ---NQSNLVTPKNGEILIAATQDFITGGYLLTQKEVFLTKEEAMQLAACFLANEDSTMHI 580
Query: 600 DMPPPAIIKPRKLWTGKQIFSLIMRPN 626
+PPPA++KPR+LWTGKQ+FSL+MRPN
Sbjct: 581 KLPPPALLKPRRLWTGKQMFSLLMRPN 607
Score = 547 bits (1349), Expect = e-155
Identities = 268/407 (65%), Positives = 317/407 (77%)
Query: 710 NRGFSFGIIDVTPGKKLIEAKNKLLESGYSKCDGYILEMEKGTLQCQPGCTMEETLEAVM 769
NRGFSFGI DVTP KKL++ K LL +GY+KC+ YI ++ GTLQCQPGCT EETLE+VM
Sbjct: 612 NRGFSFGISDVTPSKKLLQHKELLLNNGYAKCNEYIELLKAGTLQCQPGCTPEETLESVM 671
Query: 770 LSELSSIRELAAKACFRELHPTNAPLIMAQSGSKGSNINISQMIACVGQQALNGKRVPNG 829
L ELS+IRE AAK CF ELHPTN+ LIMA SGSKGSNINISQMIACVGQQA++GKRVPNG
Sbjct: 672 LRELSAIREQAAKTCFAELHPTNSALIMALSGSKGSNINISQMIACVGQQAISGKRVPNG 731
Query: 830 FEDRSLPHFERHSKIPAARGFVENSFYTGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQ 889
FE+R+LPHFERHS IPAARGFV+NSFY+GLTPTEFFFHTM GREGLVDTAVKTAETGYLQ
Sbjct: 732 FENRALPHFERHSAIPAARGFVQNSFYSGLTPTEFFFHTMAGREGLVDTAVKTAETGYLQ 791
Query: 890 RRLVKSLEDLVLQYDMTVRNATGEVVQFRYGSDGLDPTYMEGKDRPVDLARVLADVRAKC 949
RRLVK LEDLV+ YD TVRNA E+V YG DGLDP ME +++PVDL ++RA+
Sbjct: 792 RRLVKCLEDLVVHYDGTVRNAVNEMVDTIYGGDGLDPVSMETRNKPVDLVHQYDNLRAQH 851
Query: 950 QDKNAEPLDGDGIVLAAEETLALDDFKTSTDEFKNELLSFLKATAGRVRALRARYAGCGR 1009
PL+ + + A E L +F + D+FK ++ + + + R+ L+ RY C
Sbjct: 852 PQGKDRPLNAEEMSEALETLLRTPEFAEARDDFKLDVRNHINTVSKRIGQLQKRYEKCID 911
Query: 1010 AALQLERLTLTQLVRFLRVCHHKYQRGVIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGV 1069
Q+E LT QL++F+R + +Y R V EPGTAVGA+AAQSIGEPGTQMTLKTFHFAGV
Sbjct: 912 LCHQIECLTTEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGV 971
Query: 1070 ASMNITQGVPRVKEIINASRNISTPIITAELMQPYDQEFARRVKGRI 1116
ASMNITQGVPR+ EIINA++ ISTPIITAEL + EFAR+VK RI
Sbjct: 972 ASMNITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARI 1018
Score = 49.6 bits (113), Expect = 3e-05
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 1116 ICTSKLKVKPAEVTAVSAWAIKVTGEPSKSCGWLNMSLQQLGRQLPAVVVKGLPQVSRAV 1175
I S+++VKP +V V++ + V + +N L +L L VVV GLP ++RAV
Sbjct: 1066 ILKSRMRVKPTQVEVVASQSRIVVRVEATRTSTINAELARLALSLQNVVVAGLPNINRAV 1125
Query: 1176 IACDDSSEKP 1185
IA DD+ + P
Sbjct: 1126 IAVDDARQPP 1135
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 594 bits (1467), Expect = e-169
Identities = 351/932 (37%), Positives = 519/932 (55%), Gaps = 53/932 (5%)
Query: 13 RKISHVTFNVDSPSLIQQSAHIEVITKNLFLQDGQRVPAPHGVLDRRMGTNQKDANCETC 72
R++ V F + SP I++ + E + +G R P G++D R G + + C+TC
Sbjct: 12 RQVKRVQFGILSPDEIRRMSVTEGGVQFAETMEGGR-PKLGGLMDPRQGVIDRTSRCQTC 70
Query: 73 GLGLAECVGHFGYIQLTLPVFHVGYFRAIITILQTICKECAKVMLPESLKKSYRRKFINP 132
+ EC GHFG+I L PVFH+G+ I IL+ +C C+K+++ NP
Sbjct: 71 AGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPH----------NP 120
Query: 133 EMSYLLKKNLKAVVHKKAKTFSKCPSCEAINGMVKKSSIGILKIVHEKYRAKKPT----- 187
++ ++ K+ + A + C G + + K + KKP
Sbjct: 121 KIKEIVMKSRGQPRKRLAYVYDLCKGKTICEG---GEDMDLTKENQQPDPNKKPGHGGCG 177
Query: 188 --DPIVKKVLMDFH-EAKESNKEVAAMINSGLVKEMSPLEVLNLFRRIPDEDIPLLGMNV 244
P +++ +D E K N++ +V +S V + + I DE+ +LGM+
Sbjct: 178 HYQPSIRRTGLDLTAEWKHQNEDSQ---EKKIV--VSAERVWEILKHITDEECFILGMDP 232
Query: 245 KLSRPEDLILTRLPVPPLCIRPSVVSDIKAGTNEDDLTMKQSEILLINDVIARHLASAGK 304
K +RP+ +I+T LPVPPL +RP+VV A N+DDLT K S+I+ N+ + ++ AS
Sbjct: 233 KYARPDWMIVTVLPVPPLAVRPAVVM-FGAAKNQDDLTHKLSDIIKANNELRKNEASGAA 291
Query: 305 CELIQEDWDYLQLHAALYINSEMSGIPLAMQPK-KPGRGLVQRLKGKQGRFRGNLSGKRV 363
+IQE+ LQ H A ++++M G+P AMQ KP + + RLKGK+GR RGNL GKRV
Sbjct: 292 AHVIQENIKMLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRV 351
Query: 364 DFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVCNGPDVHPGANYV 423
DFS+RTVI+PDPNL+I +VGVP +A+ LT+PE V P N+ ++ LV G +PGA Y+
Sbjct: 352 DFSARTVITPDPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYI 411
Query: 424 QQRGLKTKKYLKYGNREKIAQELKCGDVVERHLVDGDVVLFNRQPSLHKLSIMCHRAKVQ 483
R + L++ + L+CG VERHL D D+V+FNRQP+LHK+S+M HR KV
Sbjct: 412 V-RDNGERIDLRFHPKSSDLH-LQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVL 469
Query: 484 PQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGSHNTAVTVIIRVSLEQN 543
P TFR N +PYNADFDGDEMN+H+PQ+ E RAE N +T
Sbjct: 470 PWSTFRMNLSCTSPYNADFDGDEMNLHVPQSMETRAEV------ENIHIT---------- 513
Query: 544 KSNLVTPRNGELLIAATQDFITGGYLITQRDTFFTKSEAQQLAACLLAGPDATMRIDMPP 603
++TP+ + ++ QD +T +T+RD F T+ + L L T MP
Sbjct: 514 PRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFL-----PTWDAKMPQ 568
Query: 604 PAIIKPRKLWTGKQIFSLIMRPNRRCEVKANLETKGKNYTGNKDLCVQDSYVIIRNSELV 663
P I+KPR LWTGKQIFSLI+ N + ++ K + D+ V++ + EL+
Sbjct: 569 PCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDEEDEGPYKWISPGDTKVMVEHGELI 628
Query: 664 CGSMDKSTLGSGTKSSIFYILLRDWGEEYAVRGMWRLARMASYYMMNRGFSFGIIDVTPG 723
G + K +LG+ S+ +I + G + A R + + + +++ G S GI D
Sbjct: 629 MGILCKKSLGTSA-GSLLHICFLELGHDIAGRFYGNIQTVINNWLLFEGHSIGIGDTIAD 687
Query: 724 KKLIEAKNKLLESGYSKCDGYILEMEKGTLQCQPGCTMEETLEAVMLSELSSIRELAAKA 783
+ + ++ I + L+ PG T+ +T E + L+ R+ +
Sbjct: 688 PQTYNEIQQAIKKAKDDVINVIQKAHNMELEPTPGNTLRQTFENKVNRILNDARDKTGGS 747
Query: 784 CFRELHPTNAPLIMAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSK 843
+ L N M SGSKGSNINISQ+IACVGQQ + GKR+P GF R+LPHF +
Sbjct: 748 AKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQQNVEGKRIPYGFRKRTLPHFIKDDY 807
Query: 844 IPAARGFVENSFYTGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLQY 903
P +RGFVENS+ GLTP+EF+FH MGGREGL+DTAVKTAETGY+QRRL+K++E +++ Y
Sbjct: 808 GPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNY 867
Query: 904 DMTVRNATGEVVQFRYGSDGLDPTYMEGKDRP 935
D TVRN+ G+++Q RYG DGL +E ++ P
Sbjct: 868 DGTVRNSVGQLIQLRYGEDGLCGELVEFQNMP 899
Score = 91.5 bits (217), Expect = 6e-18
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1032 KYQRGVIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASRNI 1091
++Q+ PG VGALAAQS+GEP TQMTL TFHFAGV+S N+T GVPR+KEIIN S+
Sbjct: 1067 RFQQAQANPGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKP 1126
Query: 1092 STPIITAELMQPYDQEFARRVKGRIC 1117
P +T L ++ A + K +C
Sbjct: 1127 KAPSLTVFLTGGAARD-AEKAKNVLC 1151
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 592 bits (1462), Expect = e-169
Identities = 350/932 (37%), Positives = 518/932 (55%), Gaps = 53/932 (5%)
Query: 13 RKISHVTFNVDSPSLIQQSAHIEVITKNLFLQDGQRVPAPHGVLDRRMGTNQKDANCETC 72
R++ V F + SP I++ + E + +G R P G++D R G + + C+TC
Sbjct: 12 RQVKRVQFGILSPDEIRRMSVTEGGVQFAETMEGGR-PKLGGLMDPRQGVIDRTSRCQTC 70
Query: 73 GLGLAECVGHFGYIQLTLPVFHVGYFRAIITILQTICKECAKVMLPESLKKSYRRKFINP 132
+ EC GHFG+I L PVFH+G+ I IL+ +C C+K+++ NP
Sbjct: 71 AGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPH----------NP 120
Query: 133 EMSYLLKKNLKAVVHKKAKTFSKCPSCEAINGMVKKSSIGILKIVHEKYRAKKPT----- 187
++ ++ K+ + A + C G + + K + KKP
Sbjct: 121 KIKEIVMKSRGQPRKRLAYVYDLCKGKTICEG---GEDMDLTKENQQPDPNKKPGHGGCG 177
Query: 188 --DPIVKKVLMDFH-EAKESNKEVAAMINSGLVKEMSPLEVLNLFRRIPDEDIPLLGMNV 244
P +++ +D E K N++ +V +S V + + I DE+ +LGM+
Sbjct: 178 HYQPSIRRTGLDLTAEWKHQNEDSQ---EKKIV--VSAERVWEILKHITDEECFILGMDP 232
Query: 245 KLSRPEDLILTRLPVPPLCIRPSVVSDIKAGTNEDDLTMKQSEILLINDVIARHLASAGK 304
K +RP+ +I+T LPVPPL +RP+VV A N+DDLT K S+I+ N+ + ++ AS
Sbjct: 233 KYARPDWMIVTVLPVPPLAVRPAVVM-FGAAKNQDDLTHKLSDIIKANNELRKNEASGAA 291
Query: 305 CELIQEDWDYLQLHAALYINSEMSGIPLAMQPK-KPGRGLVQRLKGKQGRFRGNLSGKRV 363
+IQE+ LQ H A ++++M G+P AMQ KP + + RLKGK+GR RGNL GKRV
Sbjct: 292 AHVIQENIKMLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRV 351
Query: 364 DFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVCNGPDVHPGANYV 423
DFS+RTVI+PDPNL+I +VGVP +A+ LT+PE V P N+ ++ LV G +PGA Y+
Sbjct: 352 DFSARTVITPDPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYI 411
Query: 424 QQRGLKTKKYLKYGNREKIAQELKCGDVVERHLVDGDVVLFNRQPSLHKLSIMCHRAKVQ 483
R + L++ + L+CG VERHL D D+V+FNRQP+LHK+S+M HR KV
Sbjct: 412 V-RDNGERIDLRFHPKSSDLH-LQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVL 469
Query: 484 PQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGSHNTAVTVIIRVSLEQN 543
P TFR N +PYNADFDGDEMN+H+PQ+ E RAE N +T
Sbjct: 470 PWSTFRMNLSCTSPYNADFDGDEMNLHVPQSMETRAEV------ENIHIT---------- 513
Query: 544 KSNLVTPRNGELLIAATQDFITGGYLITQRDTFFTKSEAQQLAACLLAGPDATMRIDMPP 603
++TP+ + ++ QD +T +T+RD F T+ + L L T MP
Sbjct: 514 PRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFL-----PTWDAKMPQ 568
Query: 604 PAIIKPRKLWTGKQIFSLIMRPNRRCEVKANLETKGKNYTGNKDLCVQDSYVIIRNSELV 663
P I+KPR LWTGKQIFSLI+ N + ++ K + D+ V++ + EL+
Sbjct: 569 PCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDEEDEGPYKWISPGDTKVMVEHGELI 628
Query: 664 CGSMDKSTLGSGTKSSIFYILLRDWGEEYAVRGMWRLARMASYYMMNRGFSFGIIDVTPG 723
G + K +LG+ S+ +I + G + A R + + + +++ G S GI D
Sbjct: 629 MGILCKKSLGTSA-GSLLHICFLELGHDIAGRFYGNIQTVINNWLLFEGHSIGIGDTIAD 687
Query: 724 KKLIEAKNKLLESGYSKCDGYILEMEKGTLQCQPGCTMEETLEAVMLSELSSIRELAAKA 783
+ + ++ I + L+ PG T+ +T E + L+ + +
Sbjct: 688 PQTYNEIQQAIKKAKDDVINVIQKAHNMELEPTPGNTLRQTFENKVNRILNDAHDKTGGS 747
Query: 784 CFRELHPTNAPLIMAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSK 843
+ L N M SGSKGSNINISQ+IACVGQQ + GKR+P GF R+LPHF +
Sbjct: 748 AKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQQNVEGKRIPYGFRKRTLPHFIKDDY 807
Query: 844 IPAARGFVENSFYTGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLQY 903
P +RGFVENS+ GLTP+EF+FH MGGREGL+DTAVKTAETGY+QRRL+K++E +++ Y
Sbjct: 808 GPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNY 867
Query: 904 DMTVRNATGEVVQFRYGSDGLDPTYMEGKDRP 935
D TVRN+ G+++Q RYG DGL +E ++ P
Sbjct: 868 DGTVRNSVGQLIQLRYGEDGLCGELVEFQNMP 899
Score = 91.5 bits (217), Expect = 6e-18
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1032 KYQRGVIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASRNI 1091
++Q+ PG VGALAAQS+GEP TQMTL TFHFAGV+S N+T GVPR+KEIIN S+
Sbjct: 1067 RFQQAQANPGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKP 1126
Query: 1092 STPIITAELMQPYDQEFARRVKGRIC 1117
P +T L ++ A + K +C
Sbjct: 1127 KAPSLTVFLTGGAARD-AEKAKNVLC 1151
>BT030273-1|ABN49412.1| 395|Drosophila melanogaster IP18441p
protein.
Length = 395
Score = 569 bits (1404), Expect = e-161
Identities = 266/392 (67%), Positives = 317/392 (80%)
Query: 584 QLAACLLAGPDATMRIDMPPPAIIKPRKLWTGKQIFSLIMRPNRRCEVKANLETKGKNYT 643
QLAAC LA D+TM I +PPPA++KPR+LWTGKQ+FSL+MRPN +V+ N+ KG+NYT
Sbjct: 2 QLAACFLANEDSTMHIKLPPPALLKPRRLWTGKQMFSLLMRPNDDSQVRLNMVNKGRNYT 61
Query: 644 GNKDLCVQDSYVIIRNSELVCGSMDKSTLGSGTKSSIFYILLRDWGEEYAVRGMWRLARM 703
NKDLC DS++ IRNSEL+CG MDK+T+GSGTK IFY+LLRD+GE +A + MWRLAR+
Sbjct: 62 RNKDLCSNDSWIHIRNSELMCGVMDKATMGSGTKQCIFYLLLRDFGESHATKAMWRLARI 121
Query: 704 ASYYMMNRGFSFGIIDVTPGKKLIEAKNKLLESGYSKCDGYILEMEKGTLQCQPGCTMEE 763
ASY++ NRGFSFGI DVTP KKL++ K LL +GY+KC+ YI ++ GTLQCQPGCT EE
Sbjct: 122 ASYFLQNRGFSFGISDVTPSKKLLQHKELLLNNGYAKCNEYIELLKAGTLQCQPGCTPEE 181
Query: 764 TLEAVMLSELSSIRELAAKACFRELHPTNAPLIMAQSGSKGSNINISQMIACVGQQALNG 823
TLE+VML ELS+IRE AAK CF ELHPTN+ LIMA SGSKGSNINISQMIACVGQQA++G
Sbjct: 182 TLESVMLRELSAIREQAAKTCFAELHPTNSALIMALSGSKGSNINISQMIACVGQQAISG 241
Query: 824 KRVPNGFEDRSLPHFERHSKIPAARGFVENSFYTGLTPTEFFFHTMGGREGLVDTAVKTA 883
KRVPNGFE+R+LPHFERHS IPAARGFV+NSFY+GLTPTEFFFHTM GREGLVDTAVKTA
Sbjct: 242 KRVPNGFENRALPHFERHSAIPAARGFVQNSFYSGLTPTEFFFHTMAGREGLVDTAVKTA 301
Query: 884 ETGYLQRRLVKSLEDLVLQYDMTVRNATGEVVQFRYGSDGLDPTYMEGKDRPVDLARVLA 943
ETGYLQRRLVK LEDLV+ YD TVRNA E+V YG DGLDP ME +++PVDL
Sbjct: 302 ETGYLQRRLVKCLEDLVVHYDGTVRNAVNEMVDTIYGGDGLDPVSMETRNKPVDLVHQYD 361
Query: 944 DVRAKCQDKNAEPLDGDGIVLAAEETLALDDF 975
++RA+ PL+ + + A E L +F
Sbjct: 362 NLRAQHPQGKDRPLNAEEMSEALETLLRTPEF 393
>AE013599-1910|AAF58234.1| 1642|Drosophila melanogaster CG10122-PA
protein.
Length = 1642
Score = 361 bits (887), Expect = 4e-99
Identities = 262/751 (34%), Positives = 396/751 (52%), Gaps = 83/751 (11%)
Query: 237 IPLLGM-NVKLSR----PEDLI-LTRLPVPPLCIRP-SVVSDIKAGTNEDDLTMKQSEIL 289
+P+LG+ N L++ P DL + LPV P RP ++V D+ G + D+ + E
Sbjct: 274 VPVLGLSNTDLTQGDRSPVDLFFMDTLPVTPPRARPLNMVGDMLKGNPQTDIYINIIENN 333
Query: 290 LINDVIARHLASAGKCELIQEDWDYLQL------HAALY---INSEMSGIPLA----MQP 336
+ +V+ +++ G+ +L +E Q H LY + +MS L +
Sbjct: 334 HVLNVVLKYM-KGGQEKLTEEAKAAYQTLKGETAHEKLYTAWLALQMSVDVLLDVNMSRE 392
Query: 337 KKPGRGLVQRLKGKQGRFRGNLSGKRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPE 396
K G GL Q ++ K G R ++ GKRV++++RTVI+PDPN+ + E+G+P AK L+YP
Sbjct: 393 MKSGEGLKQIIEKKSGLIRSHMMGKRVNYAARTVITPDPNINVDEIGIPDIFAKKLSYPV 452
Query: 397 RVFPANLQWLRRLVCNGPDVHPGANYVQQRGLKTKKYLKYGN---REKIAQEL----KCG 449
V N+ LR++V NGPDVHPGANY+Q + T Y+ N RE +A+ L K G
Sbjct: 453 PVTEWNVTELRKMVMNGPDVHPGANYIQDKNGFT-TYIPADNASKRESLAKLLLSNPKDG 511
Query: 450 -DVVERHLVDGDVVLFNRQPSLHKLSIMCHRAKV-QPQRTFRFNECVCTPYNADFDGDEM 507
+V RH+++GDV+L NRQPSLHK SIM H+A++ ++TFR + C YNADFDGDEM
Sbjct: 512 IKIVHRHVLNGDVLLLNRQPSLHKPSIMGHKARILHGEKTFRLHYSNCKAYNADFDGDEM 571
Query: 508 NMHLPQTEEARAEALILMGSHNTAVTVIIRVSLEQNKSNLVTPRNGELLIAATQDFITGG 567
N H PQ+E ARAEA L+ N A SN + P++G L QD + G
Sbjct: 572 NAHYPQSEVARAEAYNLV---NVA-------------SNYLVPKDGTPLGGLIQDHVISG 615
Query: 568 YLITQRDTFFTKSEAQQLAACLLAGPDATMRIDMPPPAIIKPRKLWTGKQIFS-----LI 622
++ R FF + + QQL L+ I + PP I+KP LW+GKQI S +I
Sbjct: 616 VKLSIRGRFFNREDYQQLVFQGLS--QLKKDIKLLPPTILKPAVLWSGKQILSTIIINII 673
Query: 623 MRPNRRCEVKANLETKGKNYTGNK---DLC--------VQDSYVIIRNSELVCGSMDKST 671
R + + + GKN+ ++ +C + +S V IRN EL+ G +DK
Sbjct: 674 PEGYERINLDSFAKIAGKNWNVSRPRPPICGTNPEGNDLSESQVQIRNGELLVGVLDKQQ 733
Query: 672 LGSGTKSSIFYILLRDWGEEYAVRGMWRLARMASYYMMNRGFSFGIIDVTPGKKLIEAKN 731
G+ T + + + +G + + + ++ ++++ GF+ G+ D+ +
Sbjct: 734 YGA-TTYGLIHCMYELYGGDVSTLLLTAFTKVFTFFLQLEGFTLGVKDILVTDVADRKRR 792
Query: 732 KLLESGYSKCDGYI---LEME-----KGTLQCQPGCTMEETLEAVML-----SELSSIRE 778
K++ + + + LE+E ++ ++++ V+L S L
Sbjct: 793 KIIRECRNVGNSAVAAALELEDEPPHDELVEKMEAAYVKDSKFRVLLDRKYKSLLDGYTN 852
Query: 779 LAAKACF-REL---HPTNAPLIMAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRS 834
C R L P+N +M SG+KGS +N Q+ +GQ L GKR P +S
Sbjct: 853 DINSTCLPRGLITKFPSNNLQLMVLSGAKGSMVNTMQISCLLGQIELEGKRPPLMISGKS 912
Query: 835 LPHFERHSKIPAARGFVENSFYTGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVK 894
LP F P + GF++ F TG+ P +FFFH M GREGL+DTAVKT+ +GYLQR L+K
Sbjct: 913 LPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVKTSRSGYLQRCLIK 972
Query: 895 SLEDLVLQYDMTVRNATGEVVQFRYGSDGLD 925
LE L + YD+TVR++ VVQF YG DGLD
Sbjct: 973 HLEGLSVHYDLTVRDSDNSVVQFLYGEDGLD 1003
Score = 80.2 bits (189), Expect = 2e-14
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 1035 RGVIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIIN-ASRNIST 1093
+ + PG VG +AAQSIGEP TQMTL TFHFAG MN+T G+PR++EI+ AS NI T
Sbjct: 1169 KSLAAPGEPVGLIAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMLASSNIKT 1228
Query: 1094 PIITAELMQPYDQEFARRVK 1113
P + + +P Q A +++
Sbjct: 1229 PSMDIPI-KPGQQHQAEKLR 1247
Score = 51.2 bits (117), Expect = 8e-06
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 16 SHVTFNVDSPSLIQQSAHIEVITKNLFLQDGQRVPAPHGVLDRRMGTNQKDAN-CETCGL 74
S + F V + I++ + ++VIT F G +P G+ D RMG+ + + C TC L
Sbjct: 14 SDLEFAVFTDQEIRKLSVVKVITGITFDALGHAIPG--GLYDIRMGSYGRCMDPCGTC-L 70
Query: 75 GLAECVGHFGYIQLTLPVFHVGYFRAIITILQTICKECAKVMLPE 119
L +C GH G+I+L PV++ + + + +L C C K+ + +
Sbjct: 71 KLQDCPGHMGHIELGTPVYNPFFIKFVQRLLCIFCLHCYKLQMKD 115
>Y09103-1|CAA70321.1| 1644|Drosophila melanogaster largest subunit of
RNA polymeraseI (A) protein.
Length = 1644
Score = 350 bits (860), Expect = 8e-96
Identities = 260/752 (34%), Positives = 395/752 (52%), Gaps = 84/752 (11%)
Query: 237 IPLLGM-NVKLSR----PEDLI-LTRLPVPPLCIRP-SVVSDIKAGTNEDDLTMKQSEIL 289
+P+LG+ N L++ P DL + LPV P RP ++V D+ G + D+ + E
Sbjct: 274 VPVLGLSNTDLTQGDRSPVDLFFMDTLPVTPPRARPLNMVGDMLKGNPQTDIYINIIENN 333
Query: 290 LINDVIARHLASAGKCELIQEDWDYLQL------HAALY---INSEMSGIPLA----MQP 336
+ +V+ +++ G+ +L +E Q H LY + +MS L +
Sbjct: 334 HVLNVVLKYM-KGGQEKLTEEAKAAYQTLKGETAHEKLYTAWLALQMSVDVLLDVNMSRE 392
Query: 337 KKPGRGLVQRLKGKQGRFRGNLSGKRVDFSSRTVISPD-PNLQIQEVGVPVHVAKILTYP 395
K G GL Q ++ K G R ++ GKRV++++RTVI+P PN+ + E+G+P AK L+YP
Sbjct: 393 MKSGEGLKQIIEKKCGLIRSHMMGKRVNYAARTVITPAYPNINVDEIGIPDIFAKKLSYP 452
Query: 396 ERVFPANLQWLRRLVCNGPDVHPGANYVQQRGLKTKKYLKYGN---REKIAQEL----KC 448
V N+ +R++V NGPDVHPGANY+Q + T Y+ N RE +A+ L K
Sbjct: 453 VPVTEWNVTDVRKMVMNGPDVHPGANYIQDKNGFT-TYIPADNASKRESLAKLLLSNPKD 511
Query: 449 G-DVVERHLVDGDVVLFNRQPSLHKLSIMCHRAKV-QPQRTFRFNECVCTPYNADFDGDE 506
G +V RH+++GDV+L NRQPSLHK SIM H+A++ ++TFR + C YNADFDGDE
Sbjct: 512 GIKIVHRHVLNGDVLLLNRQPSLHKPSIMGHKARILHGEKTFRLHYSNCKAYNADFDGDE 571
Query: 507 MNMHLPQTEEARAEALILMGSHNTAVTVIIRVSLEQNKSNLVTPRNGELLIAATQDFITG 566
MN H PQ+E ARAEA L+ N A SN + P++G L QD +
Sbjct: 572 MNAHYPQSEVARAEAYNLV---NVA-------------SNYLVPKDGTPLGGLIQDHVIS 615
Query: 567 GYLITQRDTFFTKSEAQQLAACLLAGPDATMRIDMPPPAIIKPRKLWTGKQIFS-----L 621
G ++ R FF + + QQL L+ I + PP I+KP LW+GKQI S +
Sbjct: 616 GVKLSIRGRFFNREDYQQLVFQGLS--QLKKDIKLLPPTILKPAVLWSGKQILSTIIINI 673
Query: 622 IMRPNRRCEVKANLETKGKNYTGNK---DLC--------VQDSYVIIRNSELVCGSMDKS 670
I R + + + GKN+ ++ +C + +S V IRN EL+ G +DK
Sbjct: 674 IPEGYERINLDSFAKIAGKNWNVSRPRPPICGTNPEGNDLSESQVQIRNGELLVGVLDKQ 733
Query: 671 TLGSGTKSSIFYILLRDWGEEYAVRGMWRLARMASYYMMNRGFSFGIIDVTPGKKLIEAK 730
G+ T + + + +G + + + ++ ++++ GF+ G+ D+ +
Sbjct: 734 QYGA-TTYGLIHCMYELYGGDVSTLLVTAFTKVFTFFLQLEGFTLGVKDILVTDVADRKR 792
Query: 731 NKLLESGYSKCDGYI---LEME-----KGTLQCQPGCTMEETLEAVML-----SELSSIR 777
K++ + + + LE+E ++ ++++ V+L S L
Sbjct: 793 RKIIRECRNVGNSAVAAALELEDEPPHDELVEKMEAAYVKDSKFRVLLDRKYKSLLDGYT 852
Query: 778 ELAAKACF-REL---HPTNAPLIMAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDR 833
C R L P+N +M SG+KGS +N Q+ +GQ L GKR P +
Sbjct: 853 NDINSTCLPRGLITKFPSNNLQLMVLSGAKGSMVNTMQISCLLGQIELEGKRPPLMISGK 912
Query: 834 SLPHFERHSKIPAARGFVENSFYTGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLV 893
SLP F P + GF++ F TG+ P +FFFH M GREGL+DTAVKT+ +GYLQR L+
Sbjct: 913 SLPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVKTSRSGYLQRCLI 972
Query: 894 KSLEDLVLQYDMTVRNATGEVVQFRYGSDGLD 925
K LE L + YD+TVR++ VVQF YG DGLD
Sbjct: 973 KHLEGLSVHYDLTVRDSDNSVVQFLYGEDGLD 1004
Score = 80.2 bits (189), Expect = 2e-14
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 1035 RGVIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIIN-ASRNIST 1093
+ + PG VG +AAQSIGEP TQMTL TFHFAG MN+T G+PR++EI+ AS NI T
Sbjct: 1170 KSLAAPGEPVGLIAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMLASSNIKT 1229
Query: 1094 PIITAELMQPYDQEFARRVK 1113
P + + +P Q A +++
Sbjct: 1230 PSMDIPI-KPGQQHQAEKLR 1248
Score = 51.2 bits (117), Expect = 8e-06
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 16 SHVTFNVDSPSLIQQSAHIEVITKNLFLQDGQRVPAPHGVLDRRMGTNQKDAN-CETCGL 74
S + F V + I++ + ++VIT F G +P G+ D RMG+ + + C TC L
Sbjct: 14 SDLEFAVFTDQEIRKLSVVKVITGITFDALGHAIPG--GLYDIRMGSYGRCMDPCGTC-L 70
Query: 75 GLAECVGHFGYIQLTLPVFHVGYFRAIITILQTICKECAKVMLPE 119
L +C GH G+I+L PV++ + + + +L C C K+ + +
Sbjct: 71 KLQDCPGHMGHIELGTPVYNPFFIKFVQRLLCIFCLHCYKLQMKD 115
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p
protein.
Length = 1429
Score = 323 bits (793), Expect = 1e-87
Identities = 181/463 (39%), Positives = 260/463 (56%), Gaps = 22/463 (4%)
Query: 473 LSIMCHRAKVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGSHNTAV 532
+S+M HR KV P TFR N +PYNADFDGDEMN+H+PQ+ E RAE N +
Sbjct: 1 MSMMGHRVKVLPWSTFRMNLSCTSPYNADFDGDEMNLHVPQSMETRAEV------ENIHI 54
Query: 533 TVIIRVSLEQNKSNLVTPRNGELLIAATQDFITGGYLITQRDTFFTKSEAQQLAACLLAG 592
T ++TP+ + ++ QD +T +T+RD F T+ + L L
Sbjct: 55 T----------PRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFL--- 101
Query: 593 PDATMRIDMPPPAIIKPRKLWTGKQIFSLIMRPNRRCEVKANLETKGKNYTGNKDLCVQD 652
T MP P I+KPR LWTGKQIFSLI+ N + ++ K + D
Sbjct: 102 --PTWDAKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTHPDEEDEGPYKWISPGD 159
Query: 653 SYVIIRNSELVCGSMDKSTLGSGTKSSIFYILLRDWGEEYAVRGMWRLARMASYYMMNRG 712
+ V++ + EL+ G + K +LG+ S+ +I + G + A R + + + +++ G
Sbjct: 160 TKVMVEHGELIMGILCKKSLGTSA-GSLLHICFLELGHDIAGRFYGNIQTVINNWLLFEG 218
Query: 713 FSFGIIDVTPGKKLIEAKNKLLESGYSKCDGYILEMEKGTLQCQPGCTMEETLEAVMLSE 772
S GI D + + ++ I + L+ PG T+ +T E +
Sbjct: 219 HSIGIGDTIADPQTYNEIQQAIKKAKDDVINVIQKAHNMELEPTPGNTLRQTFENKVNRI 278
Query: 773 LSSIRELAAKACFRELHPTNAPLIMAQSGSKGSNINISQMIACVGQQALNGKRVPNGFED 832
L+ R+ + + L N M SGSKGSNINISQ+IACVGQQ + GKR+P GF
Sbjct: 279 LNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQQNVEGKRIPYGFRK 338
Query: 833 RSLPHFERHSKIPAARGFVENSFYTGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRL 892
R+LPHF + P +RGFVENS+ GLTP+EF+FH MGGREGL+DTAVKTAETGY+QRRL
Sbjct: 339 RTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKTAETGYIQRRL 398
Query: 893 VKSLEDLVLQYDMTVRNATGEVVQFRYGSDGLDPTYMEGKDRP 935
+K++E +++ YD TVRN+ G+++Q RYG DGL +E ++ P
Sbjct: 399 IKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGELVEFQNMP 441
Score = 91.5 bits (217), Expect = 6e-18
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1032 KYQRGVIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASRNI 1091
++Q+ PG VGALAAQS+GEP TQMTL TFHFAGV+S N+T GVPR+KEIIN S+
Sbjct: 609 RFQQAQANPGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKP 668
Query: 1092 STPIITAELMQPYDQEFARRVKGRIC 1117
P +T L ++ A + K +C
Sbjct: 669 KAPSLTVFLTGGAARD-AEKAKNVLC 693
>M11798-1|AAA28863.1| 471|Drosophila melanogaster protein (
Drosophila melanogasterRNA polymerase II large subunit
gene, 5' end. ).
Length = 471
Score = 263 bits (644), Expect = 1e-69
Identities = 165/472 (34%), Positives = 257/472 (54%), Gaps = 30/472 (6%)
Query: 13 RKISHVTFNVDSPSLIQQSAHIEVITKNLFLQDGQRVPAPHGVLDRRMGTNQKDANCETC 72
R++ V F + SP I++ + E + +G R P G++D R G + + C+TC
Sbjct: 12 RQVKRVQFGILSPDEIRRMSVTEGGVQFAETMEGGR-PKLGGLMDPRQGVIDRTSRCQTC 70
Query: 73 GLGLAECVGHFGYIQLTLPVFHVGYFRAIITILQTICKECAKVMLPESLKKSYRRKFINP 132
+ EC GHFG+I L PVFH+G+ I IL+ +C C+K+++ NP
Sbjct: 71 AGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPH----------NP 120
Query: 133 EMSYLLKKNLKAVVHKKAKTFSKCPSCEAINGMVKKSSIGILKIVHEKYRAKKPT----- 187
++ ++ K+ + A + C G + + K + KKP
Sbjct: 121 KIKEIVMKSRGQPRKRLAYVYDLCKGKTICEG---GEDMDLTKENQQPDPNKKPGHGGCG 177
Query: 188 --DPIVKKVLMDFH-EAKESNKEVAAMINSGLVKEMSPLEVLNLFRRIPDEDIPLLGMNV 244
P +++ +D E K N++ +V +S V + + I DE+ +LGM+
Sbjct: 178 HYQPSIRRTGLDLTAEWKHQNEDSQ---EKKIV--VSAERVWEILKHITDEECFILGMDP 232
Query: 245 KLSRPEDLILTRLPVPPLCIRPSVVSDIKAGTNEDDLTMKQSEILLINDVIARHLASAGK 304
K +RP+ +I+T LPVPPL +RP+VV A N+DDLT K S+I+ N+ + ++ AS
Sbjct: 233 KYARPDWMIVTVLPVPPLAVRPAVVM-FGAAKNQDDLTHKLSDIIKANNELRKNEASGAA 291
Query: 305 CELIQEDWDYLQLHAALYINSEMSGIPLAMQPKKPGRGLVQRLKGKQGRFRGNLSGKRVD 364
+IQE+ LQ H A ++++M G+P + KP + + RLKGK+GR RGNL GKRVD
Sbjct: 292 AHVIQENIKMLQFHVATLVDNDMPGMPGYAKVGKPLKAIKARLKGKEGRIRGNLMGKRVD 351
Query: 365 FSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVCNGPDVHPGANYVQ 424
FS+RTVI+PDPNL+I +VGVP +A+ LT+PE V P N+ ++ LV G +PGA Y+
Sbjct: 352 FSARTVITPDPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYI- 410
Query: 425 QRGLKTKKYLKYGNREKIAQELKCGDVVERHLVDGDVVLFNRQPSLHKLSIM 476
R + L++ + + L+CG VERHL D D+V+ NRQP +S+M
Sbjct: 411 VRDNGERIDLRF-HPKSSDLHLQCGYKVERHLRDDDLVIGNRQPRCTTMSMM 461
>AY121632-1|AAM51959.1| 542|Drosophila melanogaster GM01935p protein.
Length = 542
Score = 80.2 bits (189), Expect = 2e-14
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 1035 RGVIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIIN-ASRNIST 1093
+ + PG VG +AAQSIGEP TQMTL TFHFAG MN+T G+PR++EI+ AS NI T
Sbjct: 69 KSLAAPGEPVGLIAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMLASSNIKT 128
Query: 1094 PIITAELMQPYDQEFARRVK 1113
P + + +P Q A +++
Sbjct: 129 PSMDIPI-KPGQQHQAEKLR 147
>BT001379-1|AAN71134.1| 550|Drosophila melanogaster GH02702p
protein.
Length = 550
Score = 34.3 bits (75), Expect = 1.0
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 117 LPESLK-KSYRRKFINPEMSYLLKKNL-KAVVHKKAKTFSKCPSCE-AINGMVKKSSIG 172
L +S+K K R KF P++SYL+K N +AV+ + K F K P+ E AI + +G
Sbjct: 73 LVQSMKWKQSRGKFY-PQLSYLVKVNTPRAVIQETKKAFRKLPNLEQAITALSNLKGVG 130
>AE014298-1672|AAN09295.1| 550|Drosophila melanogaster CG2446-PE,
isoform E protein.
Length = 550
Score = 34.3 bits (75), Expect = 1.0
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 117 LPESLK-KSYRRKFINPEMSYLLKKNL-KAVVHKKAKTFSKCPSCE-AINGMVKKSSIG 172
L +S+K K R KF P++SYL+K N +AV+ + K F K P+ E AI + +G
Sbjct: 73 LVQSMKWKQSRGKFY-PQLSYLVKVNTPRAVIQETKKAFRKLPNLEQAITALSNLKGVG 130
>AE014298-1671|AAN09294.1| 550|Drosophila melanogaster CG2446-PD,
isoform D protein.
Length = 550
Score = 34.3 bits (75), Expect = 1.0
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 117 LPESLK-KSYRRKFINPEMSYLLKKNL-KAVVHKKAKTFSKCPSCE-AINGMVKKSSIG 172
L +S+K K R KF P++SYL+K N +AV+ + K F K P+ E AI + +G
Sbjct: 73 LVQSMKWKQSRGKFY-PQLSYLVKVNTPRAVIQETKKAFRKLPNLEQAITALSNLKGVG 130
>AE014298-1670|AAG22344.1| 550|Drosophila melanogaster CG2446-PC,
isoform C protein.
Length = 550
Score = 34.3 bits (75), Expect = 1.0
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 117 LPESLK-KSYRRKFINPEMSYLLKKNL-KAVVHKKAKTFSKCPSCE-AINGMVKKSSIG 172
L +S+K K R KF P++SYL+K N +AV+ + K F K P+ E AI + +G
Sbjct: 73 LVQSMKWKQSRGKFY-PQLSYLVKVNTPRAVIQETKKAFRKLPNLEQAITALSNLKGVG 130
>AE014298-1669|AAF48080.1| 550|Drosophila melanogaster CG2446-PB,
isoform B protein.
Length = 550
Score = 34.3 bits (75), Expect = 1.0
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 117 LPESLK-KSYRRKFINPEMSYLLKKNL-KAVVHKKAKTFSKCPSCE-AINGMVKKSSIG 172
L +S+K K R KF P++SYL+K N +AV+ + K F K P+ E AI + +G
Sbjct: 73 LVQSMKWKQSRGKFY-PQLSYLVKVNTPRAVIQETKKAFRKLPNLEQAITALSNLKGVG 130
>AE014298-1668|AAF48081.1| 550|Drosophila melanogaster CG2446-PA,
isoform A protein.
Length = 550
Score = 34.3 bits (75), Expect = 1.0
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 117 LPESLK-KSYRRKFINPEMSYLLKKNL-KAVVHKKAKTFSKCPSCE-AINGMVKKSSIG 172
L +S+K K R KF P++SYL+K N +AV+ + K F K P+ E AI + +G
Sbjct: 73 LVQSMKWKQSRGKFY-PQLSYLVKVNTPRAVIQETKKAFRKLPNLEQAITALSNLKGVG 130
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.320 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,748,341
Number of Sequences: 52641
Number of extensions: 2486997
Number of successful extensions: 5264
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 5206
Number of HSP's gapped (non-prelim): 32
length of query: 1191
length of database: 24,830,863
effective HSP length: 93
effective length of query: 1098
effective length of database: 19,935,250
effective search space: 21888904500
effective search space used: 21888904500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 67 (31.1 bits)
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