GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000759-TA|BGIBMGA000759-PA|undefined
         (76 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3593|AAM68248.1|   82|Drosophila melanogaster CG30415-P...   108   8e-25
AE013599-3592|AAM68247.1|   82|Drosophila melanogaster CG30415-P...   108   8e-25
AY071298-1|AAL48920.1|  687|Drosophila melanogaster RE32772p pro...    26   5.5  
AY060329-1|AAL25368.1|  654|Drosophila melanogaster GH21837p pro...    26   5.5  
AJ224676-1|CAA12058.1|  687|Drosophila melanogaster rho type GEF...    26   5.5  
AE014134-3232|AAF53887.2|  687|Drosophila melanogaster CG10043-P...    26   5.5  
AE014134-3231|AAF53886.1|  687|Drosophila melanogaster CG10043-P...    26   5.5  
AE013599-922|AAF58902.2|  654|Drosophila melanogaster CG1698-PA ...    26   5.5  
AE013599-534|AAF59173.2|  403|Drosophila melanogaster CG17853-PA...    26   5.5  

>AE013599-3593|AAM68248.1|   82|Drosophila melanogaster
          CG30415-PB, isoform B protein.
          Length = 82

 Score =  108 bits (260), Expect = 8e-25
 Identities = 45/71 (63%), Positives = 55/71 (77%)

Query: 6  GRPMKFPYTFSAKIAQFPYKFYLQNLWLWRYWAAAIVISSPLFYKIHKMSNSPENVSKWA 65
          GRPM++PYTFSAKIAQFP K Y++N W+WRY+  A V   P+FYKI K++NSPEN   WA
Sbjct: 12 GRPMRYPYTFSAKIAQFPIKHYIKNQWIWRYYFIAAVACVPVFYKISKLANSPENKKAWA 71

Query: 66 EIRRKEAAEHH 76
          E + KE AEHH
Sbjct: 72 ESQAKEHAEHH 82


>AE013599-3592|AAM68247.1|   82|Drosophila melanogaster
          CG30415-PA, isoform A protein.
          Length = 82

 Score =  108 bits (260), Expect = 8e-25
 Identities = 45/71 (63%), Positives = 55/71 (77%)

Query: 6  GRPMKFPYTFSAKIAQFPYKFYLQNLWLWRYWAAAIVISSPLFYKIHKMSNSPENVSKWA 65
          GRPM++PYTFSAKIAQFP K Y++N W+WRY+  A V   P+FYKI K++NSPEN   WA
Sbjct: 12 GRPMRYPYTFSAKIAQFPIKHYIKNQWIWRYYFIAAVACVPVFYKISKLANSPENKKAWA 71

Query: 66 EIRRKEAAEHH 76
          E + KE AEHH
Sbjct: 72 ESQAKEHAEHH 82


>AY071298-1|AAL48920.1|  687|Drosophila melanogaster RE32772p
           protein.
          Length = 687

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 40  AIVISSPLFYKIHKMSNSPENVSKWAEI 67
           A  ISSPL  +I  +   P   +KW E+
Sbjct: 342 AFEISSPLIDRIVAVCQGPNEANKWVEL 369


>AY060329-1|AAL25368.1|  654|Drosophila melanogaster GH21837p
           protein.
          Length = 654

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 27  YLQNLWLWRYWAAAIVISSPLFYKIHKMSNSPENVSKWAEIRR 69
           Y   ++++ +  +A  +   LF+ I  +   P ++  WA IR+
Sbjct: 565 YQSGVYVFGWCLSAFGVGQVLFWAIPAVRKQPSHLGLWARIRK 607


>AJ224676-1|CAA12058.1|  687|Drosophila melanogaster rho type GEF
           protein.
          Length = 687

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 40  AIVISSPLFYKIHKMSNSPENVSKWAEI 67
           A  ISSPL  +I  +   P   +KW E+
Sbjct: 342 AFEISSPLIDRIVAVCQGPNEANKWVEL 369


>AE014134-3232|AAF53887.2|  687|Drosophila melanogaster CG10043-PB,
           isoform B protein.
          Length = 687

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 40  AIVISSPLFYKIHKMSNSPENVSKWAEI 67
           A  ISSPL  +I  +   P   +KW E+
Sbjct: 342 AFEISSPLIDRIVAVCQGPNEANKWVEL 369


>AE014134-3231|AAF53886.1|  687|Drosophila melanogaster CG10043-PA,
           isoform A protein.
          Length = 687

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 40  AIVISSPLFYKIHKMSNSPENVSKWAEI 67
           A  ISSPL  +I  +   P   +KW E+
Sbjct: 342 AFEISSPLIDRIVAVCQGPNEANKWVEL 369


>AE013599-922|AAF58902.2|  654|Drosophila melanogaster CG1698-PA
           protein.
          Length = 654

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 27  YLQNLWLWRYWAAAIVISSPLFYKIHKMSNSPENVSKWAEIRR 69
           Y   ++++ +  +A  +   LF+ I  +   P ++  WA IR+
Sbjct: 565 YQSGVYVFGWCLSAFGVGQVLFWAIPAVRKQPSHLGLWARIRK 607


>AE013599-534|AAF59173.2|  403|Drosophila melanogaster CG17853-PA
           protein.
          Length = 403

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 8   PMKFPYTFSAKIAQFPYKFYLQNLWL-WRYWAAAIVISSPLFY 49
           P+ FP  +   +A+FP +  LQ+L L    W  A+   + + Y
Sbjct: 61  PVSFPINYVIHLAEFPPELLLQSLQLCLNTWCFALKFFTLIVY 103


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.132    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,909,320
Number of Sequences: 52641
Number of extensions: 121090
Number of successful extensions: 273
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 264
Number of HSP's gapped (non-prelim): 9
length of query: 76
length of database: 24,830,863
effective HSP length: 56
effective length of query: 20
effective length of database: 21,882,967
effective search space: 437659340
effective search space used: 437659340
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 53 (25.4 bits)