Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000759-TA|BGIBMGA000759-PA|undefined
(76 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g73650.3 68414.m08526 expressed protein 28 0.86
At1g73650.2 68414.m08528 expressed protein 28 0.86
At1g73650.1 68414.m08527 expressed protein 28 0.86
At5g20050.1 68418.m02387 protein kinase family protein contains ... 27 1.1
At1g50840.1 68414.m05717 polI-like DNA polymerase, putative simi... 26 2.6
At1g18180.1 68414.m02260 expressed protein 26 2.6
At3g45040.1 68416.m04852 phosphatidate cytidylyltransferase fami... 25 4.6
At3g20540.1 68416.m02600 DNA-directed DNA polymerase family prot... 25 4.6
At4g30360.1 68417.m04314 cyclic nucleotide-regulated ion channel... 25 6.1
At4g01130.1 68417.m00151 acetylesterase, putative similar to lan... 25 6.1
At2g04600.1 68415.m00468 hypothetical protein 25 6.1
At5g24155.1 68418.m02841 squalene monooxygenase, putative / squa... 25 8.0
At5g22030.2 68418.m02564 ubiquitin-specific protease 8, putative... 25 8.0
At5g22030.1 68418.m02563 ubiquitin-specific protease 8, putative... 25 8.0
>At1g73650.3 68414.m08526 expressed protein
Length = 302
Score = 27.9 bits (59), Expect = 0.86
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 34 WRYWAAAIVISSPLFYKIHKMSNSPENVSKWAEI 67
W W +I + + NSPEN KW ++
Sbjct: 142 WTMWVFGFLIEAAADQQKLSFKNSPENRGKWCDV 175
>At1g73650.2 68414.m08528 expressed protein
Length = 291
Score = 27.9 bits (59), Expect = 0.86
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 34 WRYWAAAIVISSPLFYKIHKMSNSPENVSKWAEI 67
W W +I + + NSPEN KW ++
Sbjct: 142 WTMWVFGFLIEAAADQQKLSFKNSPENRGKWCDV 175
>At1g73650.1 68414.m08527 expressed protein
Length = 290
Score = 27.9 bits (59), Expect = 0.86
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 34 WRYWAAAIVISSPLFYKIHKMSNSPENVSKWAEI 67
W W +I + + NSPEN KW ++
Sbjct: 142 WTMWVFGFLIEAAADQQKLSFKNSPENRGKWCDV 175
>At5g20050.1 68418.m02387 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 452
Score = 27.5 bits (58), Expect = 1.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 6 GRPMKFPYTFSAKIAQFPYKFYLQNL 31
GR ++ Y+F K+A P KF L++L
Sbjct: 73 GRELRIEYSFLRKVAGVPTKFKLEDL 98
>At1g50840.1 68414.m05717 polI-like DNA polymerase, putative similar
to PolI-like DNA polymerase [Oryza sativa] GI:19912795
contains Pfam profiles PF01612: 3'-5' exonuclease,
PF00476: DNA polymerase I family A
Length = 1050
Score = 26.2 bits (55), Expect = 2.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 56 NSPENVSKWAEIRRKEAAE 74
N + V KW E+R+KEA E
Sbjct: 913 NDRQEVRKWQEMRKKEAIE 931
>At1g18180.1 68414.m02260 expressed protein
Length = 292
Score = 26.2 bits (55), Expect = 2.6
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 34 WRYWAAAIVISSPLFYKIHKMSNSPENVSKWAEI 67
W W A +I + + PEN KW ++
Sbjct: 142 WTMWVAGFLIEATADQQKLSFKKCPENKGKWCDV 175
>At3g45040.1 68416.m04852 phosphatidate cytidylyltransferase family
protein weak similarity to SP|P20048 Dolichol kinase (EC
2.7.1.108) {Saccharomyces cerevisiae}; contains Pfam
profile: PF01148 phosphatidate cytidylyltransferase
Length = 569
Score = 25.4 bits (53), Expect = 4.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 19 IAQFPYKFYLQNLWLWRYWAAAIVISSPLFYKIHKMS 55
+ F + L+ L L YW IV+S FY I + S
Sbjct: 329 VLTFVFSEPLKRLSLCIYWILLIVVSVSRFYNISRSS 365
>At3g20540.1 68416.m02600 DNA-directed DNA polymerase family protein
similar to PolI-like DNA polymerase [Oryza sativa]
GI:19912795; contains Pfam profiles PF01612: 3'-5'
exonuclease, PF00476: DNA polymerase I family A
Length = 1034
Score = 25.4 bits (53), Expect = 4.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 56 NSPENVSKWAEIRRKEAAE 74
N + V KW E+R+KEA +
Sbjct: 897 NDRQEVRKWQELRKKEAIQ 915
>At4g30360.1 68417.m04314 cyclic nucleotide-regulated ion channel,
putative (CNGC17) similar to cyclic nucleotide and
calmodulin-regulated ion channel cngc5 GI:4581205 from
[Arabidopsis thaliana]
Length = 720
Score = 25.0 bits (52), Expect = 6.1
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 17 AKIAQFPYKFYLQNLWLWRYWAAAIVISSPLFYKIHKMSNS 57
+K Q ++FY + WR WAA + ++ YK M N+
Sbjct: 602 SKKLQHTFRFYSHH---WRTWAACFIQAAWRRYKRRVMENN 639
>At4g01130.1 68417.m00151 acetylesterase, putative similar to
lanatoside 15'-O-acetylesterase [Digitalis lanata]
GI:3688284; contains InterPro Entry IPR001087 Lipolytic
enzyme, G-D-S-L family
Length = 382
Score = 25.0 bits (52), Expect = 6.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 53 KMSNSPENVSKWAEIRRKEAAEHH 76
K + P N W I EAA HH
Sbjct: 336 KACHDPHNYVSWDGIHATEAANHH 359
>At2g04600.1 68415.m00468 hypothetical protein
Length = 316
Score = 25.0 bits (52), Expect = 6.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 34 WRYWAAAIVISSPLFYKIHKMSNSPENV 61
+R W I I S FY +K SP V
Sbjct: 105 FRTWTQGIYIKSKSFYVYYKPKKSPNQV 132
Score = 25.0 bits (52), Expect = 6.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 34 WRYWAAAIVISSPLFYKIHKMSNSPENV 61
+R W I I S FY +K SP V
Sbjct: 259 FRTWTQGIYIKSKSFYVYYKPKKSPNQV 286
>At5g24155.1 68418.m02841 squalene monooxygenase, putative /
squalene epoxidase, putative similar to SP|O65404 (SE
1,1), SP|O65402 (SE 1,2)
Length = 121
Score = 24.6 bits (51), Expect = 8.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 40 AIVISSPLFYKIHKMSNSPENVSKWAEIRRKEAAE 74
A V++ +FY ++ +PE AE RR AA+
Sbjct: 15 AFVLTWTVFYVTNRKKKAPELADAAAEERRDSAAD 49
>At5g22030.2 68418.m02564 ubiquitin-specific protease 8, putative
(UBP8) similar to ubiquitin-specific protease 8 partial
sequence GI:11993469 [Arabidopsis thaliana]
Length = 622
Score = 24.6 bits (51), Expect = 8.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 4 APGRPMKFPYTFSAKIAQFPYKF 26
APG P TF AK+A+F +F
Sbjct: 91 APGASTVAPRTFKAKLARFAPQF 113
>At5g22030.1 68418.m02563 ubiquitin-specific protease 8, putative
(UBP8) similar to ubiquitin-specific protease 8 partial
sequence GI:11993469 [Arabidopsis thaliana]
Length = 622
Score = 24.6 bits (51), Expect = 8.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 4 APGRPMKFPYTFSAKIAQFPYKF 26
APG P TF AK+A+F +F
Sbjct: 91 APGASTVAPRTFKAKLARFAPQF 113
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.132 0.445
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,946,807
Number of Sequences: 28952
Number of extensions: 61784
Number of successful extensions: 186
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 172
Number of HSP's gapped (non-prelim): 15
length of query: 76
length of database: 12,070,560
effective HSP length: 56
effective length of query: 20
effective length of database: 10,449,248
effective search space: 208984960
effective search space used: 208984960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 51 (24.6 bits)
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