Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000758-TA|BGIBMGA000758-PA|IPR009050|Globin-like,
IPR002052|N-6 Adenine-specific DNA methylase
(215 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3B9.01 |||Hsp70 nucleotide exchange factor |Schizosaccharomy... 28 0.91
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 26 3.7
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 26 4.8
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 25 6.4
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 25 6.4
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 25 6.4
SPACUNK4.11c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 6.4
SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase... 25 8.5
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 8.5
>SPBC3B9.01 |||Hsp70 nucleotide exchange factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 287
Score = 28.3 bits (60), Expect = 0.91
Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 147 LSEECITKTSETIKLLSKDKI-ILCTGTIMKDIVK 180
+ E+C+TK+ T+ L K+K+ + T ++K +V+
Sbjct: 231 VDEDCVTKSLHTLYLFQKNKVSVANTNELLKSLVQ 265
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 26.2 bits (55), Expect = 3.7
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 26 SKRQEILVKLEADKKLTE-NILFDENWQLSQFWYDEKTVHSLVKVIDKVLDDRG 78
S+R+E+ +K KL + NI+FD N S E +L+++ID V ++RG
Sbjct: 217 SEREELFIK-----KLEQCNIIFDFNDPSSDLASKEIKREALLQMIDYVSENRG 265
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 25.8 bits (54), Expect = 4.8
Identities = 8/28 (28%), Positives = 20/28 (71%)
Query: 52 QLSQFWYDEKTVHSLVKVIDKVLDDRGK 79
++++ YD+ + ++ +ID+ L+D+GK
Sbjct: 44 EIAELTYDQNEMLEVMDIIDRRLNDKGK 71
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 6 DVPTLSAETFAALQEFYAEQSKRQEILVKLEADKKL 41
D PT SA F L E E K + K+E +++L
Sbjct: 1233 DEPTSSARFFNNLNEIILEYKKASTVNQKMEKEEEL 1268
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 94 RQIGDRGTVTLLEYDRRFEVHGPDYIFYDYNNPKEVPPDVHHSYDLVVADP 144
R +G +Y R F+ PD + YN+P + V+ V+ +P
Sbjct: 181 RSLGSLSITANPKYKRGFQPLLPDVVQAVYNDPASIEQFVNDKTAAVIVEP 231
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 25.4 bits (53), Expect = 6.4
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
Query: 22 YAEQSKRQEILVKLEADKKLTENILFDENWQLSQFWYDEKTVHSLVKVIDKVLDDRGKVA 81
+ E E+ + + K T +L D N Q++Y+ + + KVLD +
Sbjct: 224 FLETRAEYELYLSKMEEAKSTIYLLLDRNPDNHQYYYNLQRAYGYEDASGKVLDSAEWLN 283
Query: 82 LIS----------CPTLFVPLKRQIGDRGTVTLLEYDRRFEVHGPDYIFYD 122
L S CPT +PL++ GD + Y R+ G +F D
Sbjct: 284 LYSQLAKRYPKSECPTR-LPLEKLEGDEFLTHVDLYLRKKLKRGIPSVFVD 333
>SPACUNK4.11c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 188
Score = 25.4 bits (53), Expect = 6.4
Identities = 8/19 (42%), Positives = 17/19 (89%)
Query: 36 EADKKLTENILFDENWQLS 54
+A+++L++NI+ DE+W L+
Sbjct: 21 QAEEELSKNIVTDEHWSLA 39
>SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 444
Score = 25.0 bits (52), Expect = 8.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 59 DEKTVHSLVKVIDKVLDDRGKVALI------------SCPTLFVPLKRQIGDRGTVTLLE 106
D+K SL K KV+DD LI + TL P+ R+ D TVT++
Sbjct: 379 DDKQSWSLFKKTSKVIDDNAATHLIRHSLGGSDQRISALLTLTYPISRRYRDDITVTVIF 438
Query: 107 YDRR 110
+D +
Sbjct: 439 FDEK 442
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/52 (25%), Positives = 30/52 (57%)
Query: 134 HHSYDLVVADPPFLSEECITKTSETIKLLSKDKIILCTGTIMKDIVKELLDL 185
H ++D+ V D + +++ + + L+ + +L TGT +++ +KEL+ L
Sbjct: 672 HQNFDVCVYDEGHYLKNRMSERYKHLMNLNANFRLLLTGTPLQNNLKELVSL 723
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.137 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,063,449
Number of Sequences: 5004
Number of extensions: 46247
Number of successful extensions: 121
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 115
Number of HSP's gapped (non-prelim): 9
length of query: 215
length of database: 2,362,478
effective HSP length: 70
effective length of query: 145
effective length of database: 2,012,198
effective search space: 291768710
effective search space used: 291768710
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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