Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000757-TA|BGIBMGA000757-PA|IPR003029|RNA binding S1,
IPR013026|Tetratricopeptide region, IPR003107|RNA-processing protein,
HAT helix
(1005 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 198 3e-51
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 41 0.001
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 37 0.016
SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificit... 36 0.037
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 36 0.037
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 35 0.049
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 33 0.15
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 33 0.26
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 32 0.35
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 32 0.46
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 32 0.46
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 32 0.46
SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4 |Schiz... 32 0.46
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 31 0.61
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 31 0.80
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 31 1.1
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 31 1.1
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 30 1.4
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 30 1.4
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 1.4
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 30 1.9
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 1.9
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 2.4
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 29 2.4
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 29 4.3
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 28 5.7
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 28 5.7
SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein 2|S... 28 5.7
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 28 7.5
SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual 28 7.5
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 28 7.5
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 27 9.9
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 27 9.9
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 27 9.9
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 198 bits (483), Expect = 3e-51
Identities = 99/267 (37%), Positives = 159/267 (59%)
Query: 737 DAQPRSADHFQRALLANPSASQLWIAYMAFHLQATEIEKARAVARKALSTICFREEDEKL 796
D P +A F+R LL++P++S LWI+YMA+HL E+++AR V ++ALSTI +REEDEKL
Sbjct: 1420 DEIPSTAADFERQLLSSPNSSLLWISYMAYHLNLNELQEAREVGKRALSTINYREEDEKL 1479
Query: 797 NVWLALINLENRFGTKESQQKTLEEALQMNDTFKVHSKLLDIYVDTGKQQELSALVDLML 856
NVW+AL+NLE +GT++S ++ +EA D V+ KL I + GK + LML
Sbjct: 1480 NVWMALLNLEVAYGTEDSLKEVFKEACAYCDALIVYEKLCGILIKGGKVDLADEYMQLML 1539
Query: 857 RKYKKDPKTYTLCGTACYKLNLKEKARYVMQKALNVLEKKEHVQVLVQFXXXXXXXXXXX 916
+ +K+ P + T + EKA +++++L L K EHV ++ +F
Sbjct: 1540 KNFKQVPSVWIQYATFLLNNDKAEKAHGLLERSLQSLPKSEHVGIIEKFAILEFKNGDPE 1599
Query: 917 XXXXXXXXXXXVYPQRVDVCAVYVDMLVKENDIERVRQVMERITSHQLPARKMKVLYKKW 976
YP+R+D+ V +DM +K++D VR++ +R+ + L +K K +KKW
Sbjct: 1600 RGRTIFEGLLSSYPKRLDLWNVLIDMEMKQDDPSIVRRLFQRLLALNLSTKKAKFAFKKW 1659
Query: 977 IEVEEKIGDEGKAEIIRQRAIEYVEKA 1003
+ E+ IGD+ AE +++RAIEYV ++
Sbjct: 1660 LAYEKNIGDDEGAEQVKRRAIEYVSES 1686
Score = 136 bits (329), Expect = 1e-32
Identities = 107/363 (29%), Positives = 183/363 (50%), Gaps = 29/363 (7%)
Query: 33 LQHKPDSQ-LLPGNALHFTVDSAVDNGV--KGFVFDDVQACVLRQHLDKGK--AKRPAVG 87
L+ P Q +LPG+ ++ V ++GV K DV + + KG+ + +
Sbjct: 294 LEVMPSVQAILPGDYINVLVTDIKESGVIAKYMGVVDVTSDIYHSSPVKGEDLEDKFQLA 353
Query: 88 QKVTARVLFVMP--PRNMPYLTLKNI--FETTYPDLEQERKYKDGDIIEEAQVLKITGRS 143
+ V ARVLFV+P P + L ++ F P+ + G I+ A+V ++ S
Sbjct: 354 KSVPARVLFVIPGDPPKIAVSFLPHVLTFNFATPNTPHPDQLDIGFIVNAAKVTYVSS-S 412
Query: 144 VHMKLDHGCTAVMSIKRIDIEEEMTDEEVIAKS-----YPVGSTHRVRVLNYNLSDYFYS 198
+ + D G + I ++D++V S Y V STH R++NY+ D Y
Sbjct: 413 LGVFCDVGVPEISGFAHIS---RLSDKKVAGISPNSGPYKVDSTHEARIINYSYVDNLYI 469
Query: 199 VTDDPSVVNEKYFTMEQLSVGEIVDGHVKTVTDSYILVSLGR-MHGYVGLTHLTDTGVLL 257
++ SV+N+++ +E + VG+ VDG + + I+V++ ++G V TH+ D +
Sbjct: 470 LSFQQSVLNQQFLRIEDIEVGQFVDGTIAKLIPQGIVVTISEGINGLVPSTHMADIALQF 529
Query: 258 DPRQGSNPKLTKKFKVGQQVRARVLSVDPAKPALMLTLKPSLLAADLDVLQRHDQAVIGK 317
R +FKVG V+ RVLS + + ++LTLK SLL DL ++ ++QA G
Sbjct: 530 PER---------RFKVGSSVKCRVLSTNVLRKRVLLTLKKSLLNTDLPLIYDYEQATPGT 580
Query: 318 VYTGVIYAI-RDYILVSFFNNLMAYVPKTMVSIEPIENLTEAFHVGQIVSCTILNVDIEN 376
G + I D +V F+N++ A++P + +S I + E F VGQ +S TI++ D EN
Sbjct: 581 QTVGTLARIFEDGAIVEFYNSVRAFLPVSEMSEAYIRDAREHFKVGQTLSVTIVSCDPEN 640
Query: 377 KKL 379
+K+
Sbjct: 641 RKM 643
Score = 49.2 bits (112), Expect = 3e-06
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 9/176 (5%)
Query: 214 EQLSVGEIVDGHVKTVTDSYILVSLG-RMHGYVGLTHLTDTGVLLDPRQGSNPKLTKKFK 272
E + G ++ G V T+ ++V LG ++ G + L L D G L + N KL K
Sbjct: 661 ENIKAGSVLSGIVLQKTEDSVIVDLGDKVTGVITLGQLCD-GDLNKCSKVMN-KLRASTK 718
Query: 273 VGQQVRARVLSVDPAKPALMLTLKPSLLAADLDVLQRHDQAVI--GKVYTGVIYAIRDY- 329
+ + + VL D +K + L+LK SL+ A + + + G Y G + +
Sbjct: 719 LAEVL---VLRKDTSKKLISLSLKKSLVEAAKENRMPINITDLKEGIKYFGFVRNATTFG 775
Query: 330 ILVSFFNNLMAYVPKTMVSIEPIENLTEAFHVGQIVSCTILNVDIENKKLLGSLIP 385
+ V F + L+A VPK +S E + + + Q V+C L+V++ +K S P
Sbjct: 776 VFVEFCDGLVALVPKAYISEEYVPVPSAVYKPQQSVTCVCLSVELSQEKAFMSFKP 831
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 212 TMEQLSVGEIVDGHVKTVTDSYILVSLGRMHGYVGLTHLTD--TGVLLDPRQGSNPKLTK 269
T ++VG +DG V V D +L+ + VGL H ++ V+L+ ++K
Sbjct: 1229 TFADIAVGSNLDGTVVKVGDYGVLIRIDGTDNIVGLCHKSEIADAVVLN--------ISK 1280
Query: 270 KFKVGQQVRARVLSVDPAKPALMLTLKPSLLAADLDV 306
+ G +VRA VL VD K + L LK S +D D+
Sbjct: 1281 LYSSGDKVRAHVLDVDSEKRRIALGLKSSYFDSDSDI 1317
Score = 37.9 bits (84), Expect = 0.007
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 27/215 (12%)
Query: 194 DYFYSVTDDPSVVNEKYFTMEQLSVGEIVDGHVKTVTDSYILVSLG-RMHGYVGLTHLTD 252
++ S D + V+E G+I V + S + V L +HG V ++ + D
Sbjct: 841 EFMESKYDIDNPVDETIKKTYDYVAGKITWAVVTSAKASQLNVDLAANVHGRVDVSEVFD 900
Query: 253 T-GVLLDPRQGSNPKLTKKFKVGQQVRARVLSVDPA--------------KPALMLTLKP 297
G ++DP K K+F G ++R RVL + + K L L+++P
Sbjct: 901 NFGEIVDPN-----KPLKRFHKGDKIRVRVLGIHDSRNHKFLPISHRVSPKQFLELSVRP 955
Query: 298 SLLAADLDVLQRHDQAVIGKVYTGVIYAI-RDYILVSFFNNLMAYVP--KTMVSIEPIEN 354
S+L + + Q G TG + + ++ + VS ++ +P ++ + +
Sbjct: 956 SILNME-PFSMKEPQFKKGDEVTGFVNNVSKECVWVSLTPSVNGRIPILDLTTDVKELNS 1014
Query: 355 LTEAFHVGQIVSCTILNVDIENKKLLGSLIPTQTF 389
L + F +G+ + C ++N E+ L ++ P Q F
Sbjct: 1015 LQKHFFLGKAIKCYVVNA--EDSITLSAIGPLQGF 1047
Score = 37.5 bits (83), Expect = 0.009
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 14/175 (8%)
Query: 214 EQLSVGEIVDGHVKTVTDS----YILVSLGRMHGYVGLTHLTDTGVLLDPRQGSNPKLTK 269
+QL +G IV+ T S + V + + G+ ++ L+D V G +P +
Sbjct: 393 DQLDIGFIVNAAKVTYVSSSLGVFCDVGVPEISGFAHISRLSDKKVA-----GISPN-SG 446
Query: 270 KFKVGQQVRARVLSVDPAKPALMLTLKPSLLAADLDVLQRHDQAVIGKVYTGVIYA-IRD 328
+KV AR+++ +L+ + S+L R + +G+ G I I
Sbjct: 447 PYKVDSTHEARIINYSYVDNLYILSFQQSVLNQQF---LRIEDIEVGQFVDGTIAKLIPQ 503
Query: 329 YILVSFFNNLMAYVPKTMVSIEPIENLTEAFHVGQIVSCTILNVDIENKKLLGSL 383
I+V+ + VP T ++ ++ F VG V C +L+ ++ K++L +L
Sbjct: 504 GIVVTISEGINGLVPSTHMADIALQFPERRFKVGSSVKCRVLSTNVLRKRVLLTL 558
Score = 33.9 bits (74), Expect = 0.11
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 214 EQLSVGEIVDGHVKTVTDSYILVSL-GRMHGYVGLTHLTDTGVLLDPRQGSNPKLTKKFK 272
E L+ G + G V V ++ ++ L G M G V + D +L K T+
Sbjct: 1048 ENLTPGSRLVGKVTNVNEAGAILQLPGHMSGRVSRIDMFDDYDILP-----ETKFTRNNL 1102
Query: 273 VGQQVRARVLSVDPAKPALMLTLKPSLLAAD-LDVLQRH----DQAVIGKVYTGVIYAIR 327
VG VLSVD + L+ + S + +++ + D IG + G + +
Sbjct: 1103 VG----VCVLSVDVPNRKVALSARNSRTQSQPVEIKDKEINSVDDLKIGDICRGFVCNVA 1158
Query: 328 DY-ILVSFFNNLMAYVPKTMVSIEPIENLTEAFHVGQIVSCTILNVDIENKKLLGSL 383
+ + V+ +NL+A V + I++ FHV Q+V +I+ +D ++K++ SL
Sbjct: 1159 NQGLFVTIGHNLIARVKIGELFDTFIKDWKPHFHVNQLVKGSIVGIDNDSKRIEMSL 1215
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/130 (22%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 740 PRSADHFQRALLANPSASQLWIAYMAFHLQATEIEKARAVARKALSTICFREEDEKLNVW 799
P + +++Q L +P ++W A +L ++ +A + R+AL + +D KL W
Sbjct: 385 PLAIEYYQTILDCDPKQGEIWSALGHCYLMQDDLSRAYSAYRQALYHLK-DPKDPKL--W 441
Query: 800 LALINLENRFGTKESQQKTLEEALQMNDTF-KVHSKLLDIYVDTGKQQELSALVDLMLRK 858
+ L +R+G+ E ++ + L+M+ F KV+ + + +Q + + ++L
Sbjct: 442 YGIGILYDRYGSHEHAEEAFMQCLRMDPNFEKVNEIYFRLGIIYKQQHKFAQSLELFRHI 501
Query: 859 YKKDPKTYTL 868
PK T+
Sbjct: 502 LDNPPKPLTV 511
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/97 (19%), Positives = 37/97 (38%), Gaps = 5/97 (5%)
Query: 393 RKRKAKEKHDSIGEERETED-----EGATQINEEKDKPKNKQTLASGDAPDXXXXXXXDN 447
+++K + +D +GEE + + A +E K + K D N
Sbjct: 951 KRQKTADVNDDVGEEEVKQSVSEQVDSAQLTSEPKSESLPKSPEEKSDDTSNDVTTENTN 1010
Query: 448 RVDGEMNGRTEGKTSEESDAIDTDLSEECEQVLTPED 484
++G+ N + +DA+DT + T E+
Sbjct: 1011 DINGDSNMDNVATVDKSTDAVDTSTATVAATTTTAEE 1047
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 375 ENKKLLGSLIPTQTFRINRKRKAKEKHDSIGEERETEDEGATQINEEKDKPKNKQTLASG 434
E +L S + Q + + ++E+ S E +E+E ++ E + PK K AS
Sbjct: 21 EENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESE-ESEVEVPKKKAVAASE 79
Query: 435 DAPDXXXXXXXDNRVDGEMNGRTEGKTSEESDAIDTDLSEECE 477
D+ + + E + ++ ES++ +++ EE E
Sbjct: 80 DSESDSESSEEEEETESEEDSEVSDESESESES-ESESEEESE 121
>SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificity
factor complex subunit Rna14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 733
Score = 35.5 bits (78), Expect = 0.037
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 939 YVDMLVKENDIERVRQVMERITSHQLPARKMKVLYKKWIEVEEKIGDEGKAEIIRQR-AI 997
Y+ L+ ND R + E+ ++ A + K +Y+KW++ E GD A + QR A+
Sbjct: 515 YLSYLIAINDETNARALFEKAIP-RIAADEAKPIYQKWLDYESNYGDLNAAIALSQRMAV 573
Query: 998 EYVEKA 1003
Y +++
Sbjct: 574 VYPQES 579
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 35.5 bits (78), Expect = 0.037
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 747 QRALLANPSASQLWIAYMAFHLQATEIEKARAVARKALSTICFREEDEKLNVWLALINLE 806
++A+ + P A LW+ Y +I AR + +A F +WLA + +E
Sbjct: 568 EKAVESCPKAEILWLLYAKERKNVNDIAGARNILGRA-----FEYNSNSEEIWLAAVRIE 622
Query: 807 NRFGTKESQQKTLEEALQMNDTFKVHSKLLDIYVDTGKQQELSALVDLMLRKYKKDPKTY 866
E +K L A + T ++ +K + + ++ L++ L+ Y K Y
Sbjct: 623 FVNNENERARKLLARARIESGTERIWTKSISLERILDEKDRALQLLENALKIYPHYDKLY 682
Query: 867 TLCG 870
+ G
Sbjct: 683 MMKG 686
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 746 FQRALLANPSASQLWIAYMAFHLQATEIEKARAVARKAL 784
F RA + NP LW+ + L+A I + RA KAL
Sbjct: 735 FDRAKVKNPKNEFLWLELIKMELRAGNISQVRAALAKAL 773
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 782 KALSTICFREEDEKLNVWLALINLENRFGTKESQQKTLEEALQ 824
+A+ R + +WL + LE +GT ES LE+A++
Sbjct: 530 RAVFAFSLRVYPKSEKLWLRAVELEKLYGTTESVCSILEKAVE 572
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 35.1 bits (77), Expect = 0.049
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 406 EERETEDEGATQINEEKDKPKNKQTLASGDAPDXXXXXXXDNRVDGEMNGRTEGKTSEES 465
EE E DE + +EE + + ++ GD D DG+ G +GK SEE
Sbjct: 178 EEEEEADEMEEEFDEEGEGDEEEEEEDDGDG---------DGEGDGDGEGENDGKGSEEE 228
Query: 466 DAIDTDLSEECEQ 478
+ + D+ EE E+
Sbjct: 229 EEEEIDIEEEEEE 241
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 33.5 bits (73), Expect = 0.15
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 21/222 (9%)
Query: 343 PKTMVSIEPIENLTEAFHVGQIVSCTILNVDIENKKLLGSLIPTQTFRINRKRKAKEKHD 402
PK S+E + T+ VG+ S +I K T+ + + +EK D
Sbjct: 368 PKDSTSVEAEKTETDEPAVGKGASDVSDTAEISEK--------TEAKNADSEANLEEKSD 419
Query: 403 SIGEERETEDEGATQINEEKDKPKNKQTLASGDAPDXXXXXXXDNRVDGEMNGRTEGKTS 462
+GEE+E++DE + + KD + + + D E N + E S
Sbjct: 420 -VGEEKESKDEN-NKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDEKTDS 477
Query: 463 EES-DAIDTDLSEECEQVLTPEDLALLDLSQCRTKKQYKKRIDSILNAVSEIHSGIPLLE 521
+E+ D ++ S+E + + ++ +++ K K+ D + S+
Sbjct: 478 KETEDKVEETESKEAD--VKAKETDSIEVDDKEEKTDSKETADKVEQTDSKD------TN 529
Query: 522 EKIAKIEAKGLTTKNKMLHTALHSEKLINEERAKKLNEGLET 563
EK AK + K K + + + EK+ EE A N G ET
Sbjct: 530 EKPAKDDNKEANEKAEKVDSKDVKEKI--EEAADLQNSGKET 569
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 32.7 bits (71), Expect = 0.26
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 377 KKLLGSLIPTQTFRINRKRKAKEKHDSIGEERETEDE--GATQINEEKDKP-KNKQTLAS 433
KK++ S +PT I++ ++ + EE +EDE + QINEE K ++ +
Sbjct: 18 KKVINSNVPTDKKSIDQLQENVTSKSHLLEESSSEDEEINSFQINEEYAKRFEHNKKREE 77
Query: 434 GDAPDXXXXXXXDNRVDGEMNGRTEGKTSEESD 466
+ N VDGE + + + E+SD
Sbjct: 78 LQKLEAKYGEQMANGVDGEGSDESSSEEEEDSD 110
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 398 KEKHDSIGEERETEDEGAT-QINEEKDKPKNKQTLASGDAPDXXXXXXXDNRVDGEMNGR 456
+E+ S G+ER E+E Q+N+EK + + T + A + D +
Sbjct: 230 EEEIFSWGDERSDEEESDNEQVNDEKKQSSEEDTTENNSAAEVIDETVNDLESAVSKGLQ 289
Query: 457 TEGKTSEESDAIDTDLSEECEQVLTPEDLALLDLSQCRTKKQYKKRID 504
E + + +D ++ EE E ++ S K + +++D
Sbjct: 290 IETQPASHDGEVDGEVKEEEENKVSSSSNIEASQSSLEVKDEANRKVD 337
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 377 KKLLGSLIPTQTFRINRKRKAKEKHDSIGEERETEDEGATQINEEKDKPKNKQTLA 432
KK L S + ++ + K + KE+ +S RE+E EG T N PK + L+
Sbjct: 38 KKELNSNLNEKSVEESSKNETKEQFNSSSIPRESESEGKTASNTSPLSPKKVENLS 93
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 31.9 bits (69), Expect = 0.46
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 15/214 (7%)
Query: 394 KRKAKEKHDSIGEE---RETEDEGATQINEEKDKPKNKQTLASGDAPDXXXXXXXDN-RV 449
KRKA+EK EE RE E++ + EEK K + + A +A + +N +
Sbjct: 546 KRKAEEKARLEAEENAKREAEEQAKREA-EEKAK-REAEEKAKREAEEKAKREAEENAKR 603
Query: 450 DGEMNGRTEGKTSEESDAIDTDLSEECEQVLTP-EDLALLDLSQ-CRTKKQYKKRIDSIL 507
+ E + E + + +A + E E+ E+ A + + + + + K + ++
Sbjct: 604 EAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEE 663
Query: 508 NAVSEIHSGIPLLEEKIAKIEAKGLTTKNKMLHTALHSEKLINEERAKKLNEGLETARRA 567
NA E E+ AK EA+ + T ++++ EE ++ ++ E A
Sbjct: 664 NAKREAEEKAKREAEENAKREAEEKVKRE----TEENAKRKAEEEGKREADKNPEIKSSA 719
Query: 568 -LADLRAEPHNNCTKQTDDVQPEVKENIENENIQ 600
LA +E + + +KQT+ +PEV + + E ++
Sbjct: 720 PLAS--SEANVDTSKQTNATEPEVVDKTKVEKLK 751
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 31.9 bits (69), Expect = 0.46
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 386 TQTFRINRKRKAKEKHDSIGEE-RETEDEGATQINEEKDKPKNKQTLASGDAPDXXXXXX 444
+Q IN K+K +E++D I E+ +E++DE NEE +K + +A DAP+
Sbjct: 197 SQGTEINLKQKIEEENDEILEDSKESKDE-----NEE-NKETSTTNVAETDAPEEETVDT 250
Query: 445 XDNRVDGEMNGRTE--GKTSEESDAIDT 470
+ D E + E G+ S +S T
Sbjct: 251 VEEIADEEKHSVKEESGEASPQSSQQST 278
>SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 674
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/106 (20%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 758 QLWIAYMAFHLQATEIEKARAVARKALSTICFREEDEKLNVWLALINLENRFGTKESQQK 817
+ +IA+ F ++ E E+AR + + A+ F + + ++ + E +FG +
Sbjct: 242 RFFIAFAKFEIRQKEYERARTIFKYAID---FMPRSKSMELYKEYTHFEKQFGDHLGVES 298
Query: 818 TL--EEALQMNDTFKVHSKLLDIYVDTGKQQELSALVDLMLRKYKK 861
T+ + LQ K D ++D K +E + ++ + Y+K
Sbjct: 299 TVLDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEK 344
Score = 31.5 bits (68), Expect = 0.61
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 734 IESDAQPRSADH----FQRALLANPSASQLWIAYMAFHLQATEIEKARAVARKALSTICF 789
IE + + R+ +H F RA+ P +LW Y+ I R V + L
Sbjct: 111 IECEMKNRNINHARNLFDRAVTQLPRVDKLWYKYVYMEEMLGNITGCRQVFERWLKW--- 167
Query: 790 REEDEKLNVWLALINLENRFGTKE 813
E DE N W++ I +E R+ E
Sbjct: 168 -EPDE--NCWMSYIRMERRYHENE 188
Score = 29.5 bits (63), Expect = 2.4
Identities = 47/269 (17%), Positives = 98/269 (36%), Gaps = 10/269 (3%)
Query: 739 QPRSADHFQRALLANPSASQLWIAYMAFHLQATEIEKARAVARKALSTICFREEDEKLNV 798
Q R F+ A+ N A W+ Y + L E +AR+V +AL + + +
Sbjct: 52 QGRKRKEFEDAIRRNRLAMGHWMRYGQWELDQKEFARARSVFERALDV-----DSTYIPL 106
Query: 799 WLALINLENRFGTKESQQKTLEEAL-QMNDTFKVHSKLLDIYVDTGKQQELSALVDLMLR 857
WL I E + + + A+ Q+ K+ K + + G + + L
Sbjct: 107 WLKYIECEMKNRNINHARNLFDRAVTQLPRVDKLWYKYVYMEEMLGNITGCRQVFERWL- 165
Query: 858 KYKKDPKTYTLCGTACYKLNLKEKARYVMQKALNVLEKKEHVQVLVQFXXXXXXXXXXXX 917
K++ D + + + E+AR + ++ + V + + +F
Sbjct: 166 KWEPDENCWMSYIRMERRYHENERARGIYERFVVVHPEVTNWLRWARFEEECGNAANVRQ 225
Query: 918 XXXXXXXXXXVYPQRVDVCAVYVDMLVKENDIERVRQVMERITSHQLPARKMKVLYKKWI 977
+ +++ + ER R + + +P K LYK++
Sbjct: 226 VYLAAIDALGQEFLNERFFIAFAKFEIRQKEYERARTIFKYAIDF-MPRSKSMELYKEYT 284
Query: 978 EVEEKIGDEGKAE--IIRQRAIEYVEKAK 1004
E++ GD E ++ +R ++Y + K
Sbjct: 285 HFEKQFGDHLGVESTVLDKRRLQYEKLLK 313
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 746 FQRALLANPSASQLWIAYMAFHLQATEIEKARAVARKALSTICFREEDEKLNVWLALINL 805
+++ +L +P A W+ Y A + + ++ARA+ A++ E +L VW A I+
Sbjct: 457 YEKWILYDPEACAPWLGYAALETKLGDSDRARALYNLAVNQPIL--ETPEL-VWKAYIDF 513
Query: 806 E 806
E
Sbjct: 514 E 514
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 31.5 bits (68), Expect = 0.61
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 6/164 (3%)
Query: 411 EDEGATQINEEKDKPKNKQTLASGDAPDXXXXXXXDNRVDGEMNG-RTEGKTSEESDAID 469
E+ T++ EE+ K K +T+ +A ++ + RTE KT E I
Sbjct: 166 EEASGTRMFEER-KEKAFRTMQRKEAKVEEINTLLREEIEPRLTKLRTEKKTFLEYQHIY 224
Query: 470 TDLSEECEQVLTPEDLALLDLSQCRTKKQYKKRIDSILNAVSEIHSG---IPLLEEKIAK 526
DL E + T D L L Q ++ I S + + + +L+EKI K
Sbjct: 225 NDL-ERLSHLCTAYDYYKLSLKVEELTVQASQKHSHIAEMESSLQTSKQEVLILKEKIKK 283
Query: 527 IEAKGLTTKNKMLHTALHSEKLINEERAKKLNEGLETARRALAD 570
IE + + + L S+ E +++ +E AL +
Sbjct: 284 IEDERMRQMSVSSDRTLDSQLQTVNENITRISTSIELKNTALEE 327
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 31.1 bits (67), Expect = 0.80
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 393 RKRKAKEKHDSIGEERETEDEGATQINEEKDKPKNKQTLASGDAP 437
+ +K K+K S + E D+G + + EKDK K K++ + DAP
Sbjct: 148 KSKKKKKKSKSKDDGSEALDDGDIE-SSEKDKKKKKKSKENDDAP 191
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 97 VMPPRNMPYLTLKNIFETTYPDLEQERKYKDGDIIEEAQVLKITGRSVHMK 147
++PP + + LKNI YP + E GD + + ++ G SV ++
Sbjct: 214 IIPPNDNKGVALKNILSKIYPSISLENVLAFGDGANDVCMFELAGYSVAIR 264
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 746 FQRALLANPSASQLWIAYMAFHLQATEIEKARAVARKALSTICFREEDEKLNVWLALINL 805
F +L NP + W Y L+ + + A + LS E+ E N LA L
Sbjct: 544 FNESLKINPLSYPTWFTYGCAALELQKYDAAMEAFSRCLS--INPEDGESWNN-LASAML 600
Query: 806 ENRFGTKESQQKTLEEALQ-MNDTFKVHSKLLDIYVDTGKQQEL 848
+ + TKE +++ ++ M D +++ + I VD K E+
Sbjct: 601 KAKDHTKEQAWHAMQQGIKYMYDNWRIWENYMLISVDVNKWSEV 644
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1389
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 846 QELSALVDLMLRKYKKDPKTYTL-----CGTACYKLNLKEKARYVMQKALNVLEKKEHVQ 900
++ +DL+ + +D K TL CGTA + LN EK+ +KAL V + V
Sbjct: 1145 EQAGIALDLLEGEEDEDIKRTTLGLNLTCGTASFFLNKLEKSLDCFEKALLVSDSNADVV 1204
Query: 901 VLV 903
VLV
Sbjct: 1205 VLV 1207
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 30.3 bits (65), Expect = 1.4
Identities = 34/185 (18%), Positives = 78/185 (42%), Gaps = 14/185 (7%)
Query: 378 KLLGSLIPTQTFRINRKRKAKEKHDSIGEERETEDEGATQINEEKDKPKNKQTLASGDAP 437
K++ + + F + R KE+ + I E +++ + K +NK L+ GD
Sbjct: 160 KIISTEVIDNYFTDIKPRSTKEEREKIANELAHQEKQKERNKLLKSGRRNKAVLSFGDEV 219
Query: 438 DXXXXXXXDNRVDGEMNGRTE-GKTSEESDAIDTDLSEECEQVLTPEDLALLDLSQCR-T 495
D V + +T ++S+ + + DL + + A L+ + +
Sbjct: 220 DMPI-------VKKPLRQKTPVSRSSDTTTELSKDLISSSSSIHSTYSSAQTGLTSAKVS 272
Query: 496 KKQYKKRIDSI---LN--AVSEIHSGIPLLEEKIAKIEAKGLTTKNKMLHTALHSEKLIN 550
+Y +++D++ LN + S++ I L+ ++ +E G ++ +K + ++
Sbjct: 273 SDEYARQVDTLDTKLNSSSKSKVQEEISRLKSELRDLEKSGGSSNSKPVVVRPKKRNILT 332
Query: 551 EERAK 555
EE K
Sbjct: 333 EELEK 337
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.3 bits (65), Expect = 1.4
Identities = 29/146 (19%), Positives = 62/146 (42%), Gaps = 5/146 (3%)
Query: 389 FRINRKRKAKE--KHDSIGEERETEDEGATQINEEKDKPKNKQTLASGDAPDXXXXXXXD 446
FR+N+++ + + ++ E +E + N+E N T S DA
Sbjct: 1270 FRLNKEQLESQLQTEKAAVKKLENSNEEYKRHNQEILLSLNSSTSTSSDASRLKNELVSK 1329
Query: 447 NRVDGEMNGRTEGKTSEESDAIDTDLSE-ECEQVLTPEDLALLDLSQCRTKKQYKKRIDS 505
+ E+N + G E + + + + E E+ + L+L + ++ + +
Sbjct: 1330 ENLIEELN-QEIGHLKSELETVKSKSEDLENERAQNQSKIEQLELKNTKLAAAWRTKYEQ 1388
Query: 506 ILNAVSEIHSGI-PLLEEKIAKIEAK 530
++N E H+ I L +K +++EAK
Sbjct: 1389 VVNKSLEKHNQIRQQLSQKTSELEAK 1414
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 29.9 bits (64), Expect = 1.9
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 474 EECEQVLTPEDLALLDLSQCRTKKQYKKR---IDSILNAVSEIHSGIPLLEEKIAKIEAK 530
EEC ++ + L + KQY ++ IDS + S + L E I + E
Sbjct: 928 EECLAIVEEGESLQLKTPELLYFKQYMEKTEWIDSFNQISQKTDSTMEELVELIERGEKI 987
Query: 531 GLTTKNKMLHTAL----HSEKLINEERAKKLNEGLETARRALADLRAEPHNNC 579
GLT+ N+ + TAL SE + + E L T++ L L++E ++ C
Sbjct: 988 GLTSDNENMATALLLKEKSENWMKQVEGLLSQETLSTSK--LFQLKSEANSIC 1038
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 805 LENRFGTKESQQKTLEEALQMNDTFKVHSKLLDIYVD--TGKQQELSALVDLMLRKYKKD 862
LEN+ K + K LEE Q N + H + D+ K +E SA D+ L+K +
Sbjct: 1610 LENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVEEKLKENSANFDVKLKKVVAE 1669
Query: 863 PKTYTLCGTACYKLNLKEKARYVMQ 887
+ + + Y+ ++ + Q
Sbjct: 1670 TEFRSKAKISVYEKKTRDLQNKITQ 1694
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/111 (15%), Positives = 41/111 (36%)
Query: 394 KRKAKEKHDSIGEERETEDEGATQINEEKDKPKNKQTLASGDAPDXXXXXXXDNRVDGEM 453
++K S E E E+E +I E+K+ + + +S + + +
Sbjct: 132 EKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVV 191
Query: 454 NGRTEGKTSEESDAIDTDLSEECEQVLTPEDLALLDLSQCRTKKQYKKRID 504
E K + D++ S + D + S+ ++ + K++ +
Sbjct: 192 EKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAE 242
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/86 (16%), Positives = 39/86 (45%)
Query: 395 RKAKEKHDSIGEERETEDEGATQINEEKDKPKNKQTLASGDAPDXXXXXXXDNRVDGEMN 454
+K+ +K ++ E+ E ++ + + + + ++ +S + + + E+
Sbjct: 68 KKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVI 127
Query: 455 GRTEGKTSEESDAIDTDLSEECEQVL 480
+TE K S++ + SEE E+ +
Sbjct: 128 VKTEEKKESSSESSSSSESEEEEEAV 153
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 397 AKEKHDSIGEERETEDEGATQINEEKDKPKNKQTLASGDAPDXXXXXXX-DNRVDGEMNG 455
+ E S E +E E + E+ K + ++ +S ++ + + + + +
Sbjct: 107 SSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDS 166
Query: 456 RTEGKTSEESDAIDTDLSEECEQVL 480
+E +SE + SEE E+V+
Sbjct: 167 SSESSSSESESESSSSESEEEEEVV 191
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 536 NKMLHTALHSEKLINEERAKKLNEGLETARRALADLRAE 574
NK+LHT+L +KL E K ++G R ++ L E
Sbjct: 493 NKLLHTSLDGKKLSPSELCNKFSDGEGLPNRKVSKLSVE 531
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 399 EKHDSIGEERETEDEGATQINEEKDKPKNKQTLASGDAPDXXXXXXXDN----RVDGEMN 454
E + GE+ E E+E D+ + K + D+ D+ ++ E+
Sbjct: 272 EDEELEGEKEEEEEEKEKPEISNYDETEGKVNFSLEDSESLEFDEGSDDYDYAKLTTELV 331
Query: 455 GRTEGKTSEESDAIDTDLSEECEQVL 480
G T+ +E D ++ D E+ E++L
Sbjct: 332 GNTDSLAEDEDDILEEDEDEDEEELL 357
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 28.3 bits (60), Expect = 5.7
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 13/131 (9%)
Query: 392 NRKRKAKEKHDSIGEERETEDEGATQINEEKDKPKNKQTLASGDAPDXXXXXXXDNRVDG 451
+RKR+ E+ S+ E ++E+E +E ++ + L + P D +D
Sbjct: 42 SRKRQLAEEKKSLFENSDSENEKDLIDADEFEEAETLSDLEHDEEPQ----TFADEFIDD 97
Query: 452 EMNGRTEGKTSEESDAIDTDLSEECEQVLT-----PEDLALLDLSQCRTKKQYKKRIDSI 506
E EG+ EE D+D E + + + EDL L ++ K + ++
Sbjct: 98 EAK-ECEGE--EEDSVFDSDEEHEVKPMFSDDSGDEEDLELANMEAMSRKLDEEAELEE- 153
Query: 507 LNAVSEIHSGI 517
A E+H+ I
Sbjct: 154 KEAEEELHTNI 164
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 363 QIVSCTILNVDIENKKLLGSLIPTQTFRINRKRKAKEKHDSIGEERETEDEGATQINEEK 422
QI L+ +++ ++ LG + N K+ KH+ +GEE + E+E + +EE
Sbjct: 326 QITHYISLDDNLDVQESLGIFHYDPDYEENEKKYDAIKHEILGEEDDDENEEDEEDSEET 385
Query: 423 DKPKNKQTL 431
+ + +++
Sbjct: 386 SESEEDESV 394
>SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 162 DIEEEMTDEEVIAKSYPVGSTHRVRVLNYNLSDYFYSVTDDP 203
+I E T+E V+ K Y S ++ + +Y + + Y V D P
Sbjct: 93 EIWGEETNESVVYKEYTYNSRWKIEIPSYPVREIPYVVADTP 134
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 375 ENKKLLGSLIPTQTFRINRKRKAKEKHDSIGEERETEDEGATQINEEK 422
+ K + S +P + + RKR K + + ++ E ED + + EEK
Sbjct: 160 KRKSVEKSSVPNKKHKAERKRSPSPKIEILEDDEEIEDVASDKDEEEK 207
>SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 304
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Query: 310 HDQAVIGKVYTGVIYAIRDYILVSFFNNLMAYVPKTMVSIEPIENLTEAF-HVGQIVSCT 368
H + + G + +D++L NN Y P T +E E+ E ++ T
Sbjct: 131 HPVELFATNFGGRLKTRQDFVLKGQQNNWKRYNPTTKSYLEEFESQKEKLVYLSADSDNT 190
Query: 369 ILNVDIENKKLLGSLIPTQTFRINRKRKAKEK 400
I +D + ++G+++ ++ + KA E+
Sbjct: 191 ITELDEDKIYIIGAIVDKNRYKNLCQNKASEQ 222
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 628 KGTDDVRKTEDSKTDQGRKGRGEPAEKRRTVNVTEELRPVLHAPSAKD 675
K + + +D+K QG KG E EK+ T+ EE++ P K+
Sbjct: 66 KTQEPIVSADDAKGAQG-KGADEKEEKKETIQPPEEVKTEPPQPEEKE 112
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 395 RKAKEKHDSIGEERETEDEGATQINEEKDK-----PKNKQTLASGDAPD 438
++AKE + EE E EG + EE+++ P K T DAPD
Sbjct: 114 KEAKEPEEPPKEEAEEPQEGGEEEEEEEEEEEITDPLEKMTQECMDAPD 162
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 27.5 bits (58), Expect = 9.9
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 10/182 (5%)
Query: 488 LDLSQCRTKKQYKKRIDSILNAVSEIHSGIPLLEEKIAKIEAKG--LTTKNKMLHTALHS 545
+D T ++ +K SI+++ ++ I +I ++ L K+K+LHT L+S
Sbjct: 221 VDSLMASTLEEIEKLQSSIVHSPEKLKGKIADTSLRIQNDRSQQVELDKKSKILHTKLNS 280
Query: 546 EKLINEERAKKLNEGLETARRALADLRAEPHNNCTKQTDDV---QPEV-KENIENENIQX 601
+LI + LN L+ L +L H T+ Q E+ K+ +E Q
Sbjct: 281 LQLIEGD----LNACLKVLEECLVELDKLEHATVLLSTNQELCDQIEINKKKLEFRKEQL 336
Query: 602 XXXXXXXXXXXXXXXXXXTEIRDKKRKGTDDVRKTEDSKTDQGRKGRGEPAEKRRTVNVT 661
+ + ++ D++R+ T + K E +K + +T
Sbjct: 337 LKQLSNAQEKLEHEQHSRNQKLEAAKQRMDNIREEYKVITQERNKKIQETEKKNAMIEMT 396
Query: 662 EE 663
E+
Sbjct: 397 EQ 398
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 317 KVYTGVIYAIRDYILVSFFNNLMAYVPKTMVSIEPIENLTEAFHVGQIVSC--TILNVDI 374
+V VI D + ++ L+ + M+ PI L+ + + +V C + N I
Sbjct: 815 EVLNSVIALKEDIVSSNYLLQLLLGLLYEMIGASPITELSPSIRIDTLVGCIRSTNNPQI 874
Query: 375 ENKKLL 380
+NK LL
Sbjct: 875 QNKALL 880
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 804 NLENRFGTKESQQKTLEEALQMNDTFKVHSKLLDIYVDTGKQ--QELSALVDLMLRKYKK 861
NLE+R+ S+ + L ++ND L + D ++ E+S L+L+K +
Sbjct: 95 NLEHRYEMTVSEVRRLSH--EVNDLQTDRENLKHQFEDQIEKLNSEISNQNSLILQKKDE 152
Query: 862 DPKTYTLCGTACYKLNLKEKARYVMQKALNVLEKKEHVQ 900
K+ C K+N E A+ + Q+ ++ L+ + V+
Sbjct: 153 LEKSIQRCSELEEKINSLESAQSIEQEVISSLKDDKTVE 191
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.132 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,066,417
Number of Sequences: 5004
Number of extensions: 165835
Number of successful extensions: 709
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 647
Number of HSP's gapped (non-prelim): 77
length of query: 1005
length of database: 2,362,478
effective HSP length: 80
effective length of query: 925
effective length of database: 1,962,158
effective search space: 1814996150
effective search space used: 1814996150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -