GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000757-TA|BGIBMGA000757-PA|IPR003029|RNA binding S1,
IPR013026|Tetratricopeptide region, IPR003107|RNA-processing protein,
HAT helix
         (1005 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    27   1.9  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    27   1.9  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    27   1.9  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    27   3.2  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            27   3.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   7.5  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    25   7.5  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)

Query: 392  NRKRKAKEKHDSIGEERETEDEGATQINEEKDKPKNKQTLASGDAPDXXXXXXXDNRVDG 451
            +RKRK K       + ++  DEG +Q  + +   K   + +  D+ D        +   G
Sbjct: 979  SRKRKKKGASGGQKKRQKAMDEGLSQKQKGRILSKATVSTSESDSDDSRLKIASGDESGG 1038

Query: 452  EMNG-RTEGKTSEESDAIDTDLSE 474
            E     T+ K    SD  D+D S+
Sbjct: 1039 ESGAPATKRKRRIASDEEDSDGSQ 1062


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 5/78 (6%)

Query: 784 LSTICFREEDEKLNVWLALINLENRFGTKESQQKTLEE----ALQMNDTFKVHSKLLDIY 839
           L  +  R E+       AL+NL N++G  +SQ+          L + D  ++ ++   + 
Sbjct: 575 LRAVRLRLEESYDTAKKALVNLMNKYGDSKSQRNIFNRYPMLKLMIKDVIRLETQYWTL- 633

Query: 840 VDTGKQQELSALVDLMLR 857
           V+  KQ++L  +   +LR
Sbjct: 634 VEIPKQEKLETVPAFVLR 651


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 5/78 (6%)

Query: 784 LSTICFREEDEKLNVWLALINLENRFGTKESQQKTLEE----ALQMNDTFKVHSKLLDIY 839
           L  +  R E+       AL+NL N++G  +SQ+          L + D  ++ ++   + 
Sbjct: 575 LRAVRLRLEESYDTAKKALVNLMNKYGDSKSQRNIFNRYPMLKLMIKDVIRLETQYWTL- 633

Query: 840 VDTGKQQELSALVDLMLR 857
           V+  KQ++L  +   +LR
Sbjct: 634 VEIPKQEKLETVPAFVLR 651


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 12/51 (23%), Positives = 26/51 (50%)

Query: 813 ESQQKTLEEALQMNDTFKVHSKLLDIYVDTGKQQELSALVDLMLRKYKKDP 863
           E  +K  +E  +  +  +     +D  ++  KQ+EL  +   M+++Y+ DP
Sbjct: 132 EKDRKKKDEIHRQIERERADRSAIDNLLEESKQRELKRMELAMVKQYRPDP 182


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 12/51 (23%), Positives = 26/51 (50%)

Query: 813 ESQQKTLEEALQMNDTFKVHSKLLDIYVDTGKQQELSALVDLMLRKYKKDP 863
           E  +K  +E  +  +  +     +D  ++  KQ+EL  +   M+++Y+ DP
Sbjct: 132 EKDRKKKDEIHRQIERERADRSAIDNLLEESKQRELKRMELAMVKQYRPDP 182


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 9/39 (23%), Positives = 23/39 (58%)

Query: 393 RKRKAKEKHDSIGEERETEDEGATQINEEKDKPKNKQTL 431
           R+++ KE+ +    E+E E E A +   E+++ + ++ +
Sbjct: 500 RQQREKEQREREQREKEREREAARERERERERERERERM 538


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 14/52 (26%), Positives = 24/52 (46%)

Query: 543 LHSEKLINEERAKKLNEGLETARRALADLRAEPHNNCTKQTDDVQPEVKENI 594
           L   +L  + RA + N G  + +      RA    +CT+      PE+K+N+
Sbjct: 76  LDLNELERKRRATEGNGGKSSTKGKECRTRAGEKGHCTRYQSCKGPELKDNV 127


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.132    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,223
Number of Sequences: 2123
Number of extensions: 34200
Number of successful extensions: 61
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 51
Number of HSP's gapped (non-prelim): 14
length of query: 1005
length of database: 516,269
effective HSP length: 71
effective length of query: 934
effective length of database: 365,536
effective search space: 341410624
effective search space used: 341410624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)