Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000756-TA|BGIBMGA000756-PA|IPR003029|RNA binding S1,
IPR008994|Nucleic acid-binding, OB-fold
(250 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4S7N9 Cluster: Chromosome 18 SCAF14712, whole genome s... 95 1e-18
UniRef50_Q1ED11 Cluster: Pdcd11 protein; n=6; Danio rerio|Rep: P... 93 6e-18
UniRef50_A0JMT9 Cluster: LOC779090 protein; n=6; Tetrapoda|Rep: ... 91 2e-17
UniRef50_UPI0000E22681 Cluster: PREDICTED: programmed cell death... 87 5e-16
UniRef50_Q14690 Cluster: RRP5 protein homolog; n=32; Amniota|Rep... 87 5e-16
UniRef50_UPI0000F2B0DB Cluster: PREDICTED: similar to KIAA0185; ... 86 7e-16
UniRef50_UPI00015B5DEE Cluster: PREDICTED: similar to programmed... 81 2e-14
UniRef50_O74835 Cluster: U3 snoRNP-associated protein Rrp5; n=1;... 79 1e-13
UniRef50_Q7PQF3 Cluster: ENSANGP00000011318; n=1; Anopheles gamb... 79 1e-13
UniRef50_A7SBJ3 Cluster: Predicted protein; n=3; Nematostella ve... 77 3e-13
UniRef50_Q9VC94 Cluster: CG5728-PA; n=2; Sophophora|Rep: CG5728-... 74 3e-12
UniRef50_Q0IED9 Cluster: Programmed cell death protein 11; n=1; ... 74 3e-12
UniRef50_A4QSV3 Cluster: Putative uncharacterized protein; n=2; ... 72 1e-11
UniRef50_Q6C430 Cluster: Yarrowia lipolytica chromosome E of str... 70 6e-11
UniRef50_Q0UD83 Cluster: Putative uncharacterized protein; n=1; ... 69 8e-11
UniRef50_Q010S4 Cluster: rRNA processing protein Rrp5; n=2; Ostr... 69 1e-10
UniRef50_Q7SB69 Cluster: Putative uncharacterized protein NCU062... 66 6e-10
UniRef50_A6S458 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_A7PW23 Cluster: Chromosome chr8 scaffold_34, whole geno... 64 3e-09
UniRef50_A2DQY1 Cluster: S1 RNA binding domain containing protei... 64 4e-09
UniRef50_Q2UDF1 Cluster: RRNA processing protein Rrp5; n=11; Pez... 62 1e-08
UniRef50_A5DPT1 Cluster: Putative uncharacterized protein; n=1; ... 60 5e-08
UniRef50_UPI0000E4A233 Cluster: PREDICTED: similar to Programmed... 59 1e-07
UniRef50_Q9LHM6 Cluster: Pre-rRNA processing protein RRP5; n=6; ... 53 8e-06
UniRef50_Q5KH56 Cluster: RRNA processing-related protein, putati... 53 8e-06
UniRef50_Q05022 Cluster: rRNA biogenesis protein RRP5; n=6; Sacc... 50 4e-05
UniRef50_Q54L26 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_A3LTH8 Cluster: Part of small ribosomal subunit (SSU) p... 46 7e-04
UniRef50_A5DT96 Cluster: Putative uncharacterized protein; n=2; ... 46 0.001
UniRef50_Q23TZ6 Cluster: S1 RNA binding domain containing protei... 44 0.003
UniRef50_Q18038 Cluster: Putative uncharacterized protein; n=2; ... 44 0.004
UniRef50_UPI0000D57008 Cluster: PREDICTED: similar to CG5558-PA,... 43 0.006
UniRef50_A0B781 Cluster: Conserved repeat domain; n=1; Methanosa... 41 0.026
UniRef50_A7AQQ0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.045
UniRef50_Q7QT14 Cluster: GLP_675_28554_23026; n=1; Giardia lambl... 39 0.10
UniRef50_Q5CW10 Cluster: RRP5 like protein involved in rRNA biog... 38 0.18
UniRef50_UPI000049887B Cluster: conserved hypothetical protein; ... 38 0.32
UniRef50_Q93138 Cluster: ORF1; n=1; Bombyx mori|Rep: ORF1 - Bomb... 34 3.9
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 34 3.9
UniRef50_A3DEF4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_A0PAH0 Cluster: Growth hormone receptor; n=1; Elaphe qu... 33 6.8
UniRef50_A5V0B5 Cluster: RNA binding S1 domain protein; n=4; Chl... 33 6.8
UniRef50_Q7NBG0 Cluster: Isoleucyl-tRNA synthetase; n=1; Mycopla... 33 6.8
UniRef50_Q4FLB1 Cluster: Sarcosine dehydrogenase; n=3; Bacteria|... 33 9.0
>UniRef50_Q4S7N9 Cluster: Chromosome 18 SCAF14712, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 18 SCAF14712, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 2384
Score = 95.5 bits (227), Expect = 1e-18
Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 7/149 (4%)
Query: 74 KSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKT-EKVRE 132
+++R G+ LLG V V+D ++ VS+PC L G + +I ESY K+L ++ E++
Sbjct: 2 QNVREGMLLLGAVKEVADFEVTVSLPCGLQGYLSIKNICESYTKVLSKQLDSSDIEEIYS 61
Query: 133 LSQMFKPGQYIAVSVVELAP---GNT--MLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVE 187
L +F PG + V +L GN L+ P+ VN + +K G + V SVE
Sbjct: 62 LPHLFCPGMVLRCLVAKLDTSKGGNLSIQLSINPKLVNKALTTSSLKAGMVLSGCVDSVE 121
Query: 188 DHGYVMDLGIPNTTAFLPKKD-ANPEIDL 215
DHGY++D+GI T AFLP+K+ AN + +L
Sbjct: 122 DHGYIVDIGIKGTNAFLPRKERANSQEEL 150
>UniRef50_Q1ED11 Cluster: Pdcd11 protein; n=6; Danio rerio|Rep:
Pdcd11 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 1431
Score = 93.1 bits (221), Expect = 6e-18
Identities = 68/221 (30%), Positives = 98/221 (44%), Gaps = 11/221 (4%)
Query: 5 EEYFPRGG---KKPTGAHFKQSGNFLGVXXXXXXXXXXXXXXSEGDDGYLSDEAQDYLKT 61
EE FPRGG KKPT + N E ++ +K
Sbjct: 2 EEDFPRGGTERKKPTDLIPHEVDNLFDTPAKVVKKKKKSVKQDEAPKSKKQKVDEENIKL 61
Query: 62 HKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEA 121
+ I L + L G +LG V VSD ++ V +P L+G + C+I ++Y +L
Sbjct: 62 NTTTTVQI-LHLRDLTVGTLMLGCVKEVSDFEVVVGLPSGLVGYLPICNICDAYTNILND 120
Query: 122 YVE--DKTEKVRELSQMFKPGQYIAVSVVELAPG-----NTMLTTMPQHVNSGKRHTEIK 174
++ D E+V LS++F PG I V L + L+ P+ VN +K
Sbjct: 121 KLDTDDGLEEVVPLSKLFTPGMLIRCVVSSLDSAKEGHISLKLSINPKDVNKALNSVALK 180
Query: 175 KGAIFQAAVSSVEDHGYVMDLGIPNTTAFLPKKDANPEIDL 215
V SVEDHGY++D+GI T AFLPKK + + DL
Sbjct: 181 PAMTLSGCVESVEDHGYLVDIGIGGTKAFLPKKSTSSKQDL 221
Score = 32.7 bits (71), Expect = 9.0
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 67 NLIFLSSKSLRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYN-KLLEAYVE 124
+L + L PG+N L V + K + +++P + G +S+SY K LE+Y E
Sbjct: 1169 SLSLTGTHKLEPGMNTLAMVQKIQPHKGLMLALPYENTGLAHLTDLSDSYTEKPLESYKE 1228
Query: 125 DKTEKVRELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVS 184
+ + + Q K +++ L + P+ + S +IK+G + VS
Sbjct: 1229 GQIIRCHVIEQKIKEFN-VSLRPSRLNKDKHDIVEDPE-IQS---IADIKEGQSIRGYVS 1283
Query: 185 SVEDHGYVMDL 195
SV D G + L
Sbjct: 1284 SVNDQGIFLRL 1294
>UniRef50_A0JMT9 Cluster: LOC779090 protein; n=6; Tetrapoda|Rep:
LOC779090 protein - Xenopus laevis (African clawed frog)
Length = 1427
Score = 91.1 bits (216), Expect = 2e-17
Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Query: 76 LRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVE--DKTEKVREL 133
L G+ LG V D ++ VS+P L G + A +I ++Y L+ VE D E + L
Sbjct: 76 LSVGMLFLGCVKRTKDFELTVSLPYCLTGYIQATNICDAYTNLISEQVEKDDPLEALVPL 135
Query: 134 SQMFKPGQYI--AVSVVEL-APG--NTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVED 188
S+++ PG + A+S +E A G + L+ P+HVN IK G + VSSVED
Sbjct: 136 SELYSPGMLVRCAISSLETTASGFPSVKLSVNPKHVNKALNTGSIKTGMVLSGCVSSVED 195
Query: 189 HGYVMDLGIPNTTAFLPKKDA 209
HGY++D+G+ T AFLP++ A
Sbjct: 196 HGYLVDIGVAGTKAFLPRQKA 216
>UniRef50_UPI0000E22681 Cluster: PREDICTED: programmed cell death
11; n=1; Pan troglodytes|Rep: PREDICTED: programmed cell
death 11 - Pan troglodytes
Length = 1491
Score = 86.6 bits (205), Expect = 5e-16
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 1 MADAEEYFPRGGK----KPTGAHFKQS---GNFLGVXXXXXXXXXXXXXXSEGDDGYLSD 53
MA+ EE FPRGG KP A F+QS N + L
Sbjct: 1 MANLEESFPRGGTRKIHKPEKA-FQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKI 59
Query: 54 EAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISE 113
E ++ K+ + LS +SL G+ +LG V V+++++ +S+P L G V I +
Sbjct: 60 EKRESSKSAR--EKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICD 117
Query: 114 SYNKLLEAYV--EDKTEKVRELSQMFKPGQYI-----AVSVVELAPGNTMLTTMPQHVNS 166
+Y K L V E + + L ++F PG + ++ + + + L+ P++VN
Sbjct: 118 AYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNR 177
Query: 167 GKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLP 205
+K G + VSS+EDHGY++D+G+ T AFLP
Sbjct: 178 VLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP 216
Score = 36.3 bits (80), Expect = 0.73
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 76 LRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEKVREL 133
L G +GRV+ V+ + + VS P +G V H+S+SY++ LE +V K + L
Sbjct: 1335 LEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYIL 1394
Query: 134 SQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVM 193
S +++ P P+ +NS + +IK+G + + V S++ HG
Sbjct: 1395 STADNV-LTLSLRSSRTNPETKSKVEDPE-INSIQ---DIKEGQLLRGYVGSIQPHGVFF 1449
Query: 194 DLG 196
LG
Sbjct: 1450 RLG 1452
>UniRef50_Q14690 Cluster: RRP5 protein homolog; n=32; Amniota|Rep:
RRP5 protein homolog - Homo sapiens (Human)
Length = 1871
Score = 86.6 bits (205), Expect = 5e-16
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 1 MADAEEYFPRGGK----KPTGAHFKQS---GNFLGVXXXXXXXXXXXXXXSEGDDGYLSD 53
MA+ EE FPRGG KP A F+QS N + L
Sbjct: 1 MANLEESFPRGGTRKIHKPEKA-FQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKI 59
Query: 54 EAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISE 113
E ++ K+ + LS +SL G+ +LG V V+++++ +S+P L G V I +
Sbjct: 60 EKRESSKSAR--EKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICD 117
Query: 114 SYNKLLEAYV--EDKTEKVRELSQMFKPGQYI-----AVSVVELAPGNTMLTTMPQHVNS 166
+Y K L V E + + L ++F PG + ++ + + + L+ P++VN
Sbjct: 118 AYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNR 177
Query: 167 GKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLP 205
+K G + VSS+EDHGY++D+G+ T AFLP
Sbjct: 178 VLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP 216
Score = 36.3 bits (80), Expect = 0.73
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 76 LRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEKVREL 133
L G +GRV+ V+ + + VS P +G V H+S+SY++ LE +V K + L
Sbjct: 1227 LEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYIL 1286
Query: 134 SQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVM 193
S +++ P P+ +NS + +IK+G + + V S++ HG
Sbjct: 1287 STADNV-LTLSLRSSRTNPETKSKVEDPE-INSIQ---DIKEGQLLRGYVGSIQPHGVFF 1341
Query: 194 DLG 196
LG
Sbjct: 1342 RLG 1344
>UniRef50_UPI0000F2B0DB Cluster: PREDICTED: similar to KIAA0185;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
KIAA0185 - Monodelphis domestica
Length = 1773
Score = 86.2 bits (204), Expect = 7e-16
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 1 MADAEEYFPRGGKKPTGAHFK------QSGNFLGVXXXXXXXXXXXXXXSEGDDGYLSDE 54
MA E+ FPRGG K K + N + + E
Sbjct: 1 MASQEDSFPRGGSKKKAHPVKAPQQPIEHDNLFDIPTEEGSRKRKRNPEQAAKNKRSKTE 60
Query: 55 AQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISES 114
++ K+ + + LS + L G+ LLG V V+++++ +S+P L G V A +I ++
Sbjct: 61 KKEPSKSEAEQSGI--LSIEVLSEGMRLLGCVKEVNNLELVISLPNDLWGYVQATNICDA 118
Query: 115 YNKLLEAYV--EDKTEKVRELSQMFKPGQYIAVSVVELAPGNTM-----LTTMPQHVNSG 167
Y K L V E+ E + LS++F+PG + +V L + L+ P+ VN
Sbjct: 119 YTKKLNEQVDREEPLEDLAPLSKLFQPGMLVRCAVSSLKSTSKKNKSIKLSLNPKDVNGV 178
Query: 168 KRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLP 205
+K G + V SVEDHGY++D+G+ T AFLP
Sbjct: 179 LSPAALKPGMLLTGTVDSVEDHGYLVDIGVGGTKAFLP 216
>UniRef50_UPI00015B5DEE Cluster: PREDICTED: similar to programmed
cell death protein 11 (pre-rrna processing protein
rrp5); n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to programmed cell death protein 11 (pre-rrna processing
protein rrp5) - Nasonia vitripennis
Length = 1662
Score = 81.4 bits (192), Expect = 2e-14
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 8 FPRGGKKPTGAHFKQSGNFLGVXXXXXXXXXXXXXXSEGDDGYLSDEAQDYLKTHKLNNN 67
FPRGGKKP K S N + D L + N
Sbjct: 272 FPRGGKKPV---IKPSNNLFSKRTKIKAKKPRSKPNKTKEVASTDDGP---LVANTAQN- 324
Query: 68 LIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYV--ED 125
L SL G+ ++GR+ V+D VS+P ++ + A IS+SY L++ E+
Sbjct: 325 ---LRLSSLHEGMVIVGRIFRVTDYHAFVSLPGQISAKLQATDISDSYTNSLKSIAKNEE 381
Query: 126 KTEKVRELSQMFKPGQYIAVSVVELAPGNTMLTTM--PQHVNSGKRHTEIKKGAIFQAAV 183
+E+ + +S ++K G Y+ V P ++ PQ +N + K + ++
Sbjct: 382 ISEEFKPMSDLYKEGDYVVCYVKSFNPNTKKVSVSLEPQLINQSLNPGTLVKRSKVVLSI 441
Query: 184 SSVEDHGYVMDLGIPNTTAFLPKKDANPE 212
SSVEDHGYV++ G+ N AFL KD E
Sbjct: 442 SSVEDHGYVLETGLKNFRAFLSIKDIADE 470
>UniRef50_O74835 Cluster: U3 snoRNP-associated protein Rrp5; n=1;
Schizosaccharomyces pombe|Rep: U3 snoRNP-associated
protein Rrp5 - Schizosaccharomyces pombe (Fission yeast)
Length = 1690
Score = 79.0 bits (186), Expect = 1e-13
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 20/160 (12%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAY-------- 122
L K++ PG +LG++ ++ + + VS+P L G V +IS+ + L++
Sbjct: 101 LRYKNITPGSLILGQIAQINTLDLAVSLPNCLTGYVPITNISDKLSDRLDSIDNHAEDNA 160
Query: 123 ---VEDKTEKVRELSQMFKPGQYIAVSVVELAPGNTM--------LTTMPQHVN-SGKRH 170
ED ++ +L ++K GQ++ VSV L NT L+ PQ N S
Sbjct: 161 ATEEEDGLNQIPDLMDLYKVGQWVRVSVTALGSENTTKTGKRHIELSLKPQDANGSAPEA 220
Query: 171 TEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLPKKDAN 210
+ G++ QA VSS+EDHG V D+GI N T FL KK N
Sbjct: 221 ADFVAGSMIQAVVSSIEDHGIVFDIGINNYTGFLSKKHIN 260
>UniRef50_Q7PQF3 Cluster: ENSANGP00000011318; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000011318 - Anopheles gambiae
str. PEST
Length = 1382
Score = 78.6 bits (185), Expect = 1e-13
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Query: 66 NNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVED 125
+NL+F +R G+ LLG V + ++ +S+P +L G V +ISE+Y+K LE
Sbjct: 35 SNLVF---GKVRAGMLLLGCVKQIRATELLISLPGRLNGIVQITNISEAYSKRLEHMYNT 91
Query: 126 KTEKVRELSQMFKPGQYIAVSVVELAPGNTM--LTTMPQHVNSGKRHTEIKKGAIFQAAV 183
++ L ++ G + + V+ LT P ++S + ++ +G + A +
Sbjct: 92 RSTDCPTLGDLYTVGDLVYMKVLRKVKDRRQVYLTLDPSKLHSDFKPAQLVEGLVLAATI 151
Query: 184 SSVEDHGYVMDLGIPNTTAFLPKKDANPEID 214
+ EDHGY MD+G+ N AFLP++ N D
Sbjct: 152 TVKEDHGYTMDIGVHNVRAFLPQEHLNGNRD 182
>UniRef50_A7SBJ3 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1771
Score = 77.4 bits (182), Expect = 3e-13
Identities = 56/165 (33%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 66 NNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVED 125
N++ LS K L G+ LLG V V + ++ +S+P L G V HI + KL+ A +
Sbjct: 102 NHVASLSFKKLCEGMKLLGAVKEVGEFELIISLPNGLSGFV---HILDINEKLMSALAKS 158
Query: 126 KTEK-----VRELSQMFKPGQYIAVSVVELAPGN-----TMLTTMPQHVNSGKRHTEIKK 175
TE+ + L +F + V EL L+ P+ VN+G T I
Sbjct: 159 STEERIEDSIPSLGDLFTVNSLVVCVVKELLSSKHGHRKVKLSLRPEDVNAGV--TNIVP 216
Query: 176 GAIFQAAVSSVEDHGYVMDLGIPNTTAFLPKKDANPEIDLGKSVN 220
G + VSSVEDHGYV+ GIP T FL KK + G+ +N
Sbjct: 217 GFVLPGCVSSVEDHGYVLSFGIPGKTGFLSKKKTGRVLVEGQYLN 261
>UniRef50_Q9VC94 Cluster: CG5728-PA; n=2; Sophophora|Rep: CG5728-PA
- Drosophila melanogaster (Fruit fly)
Length = 1430
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/152 (24%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKV 130
L+ +L+ + ++G V ++ +++++P ++ + IS++Y ++ +A + T +
Sbjct: 66 LNMDTLQEDMLVMGVVKELTATALQIALPGRMFARTLVADISDAYTRVAKAAMSGDTSEY 125
Query: 131 RELSQMFKPGQYI---AVSVVELAPGNT--MLTTMPQHVNSGKRHTEIKKGAIFQAAVSS 185
+L+++F+ G+ + A+ +L G +L+ P V+ H IKKG IF AV+
Sbjct: 126 HDLTELFQLGRIVYGKAIKTEKLDTGRVSLLLSLKPADVHGNLHHKSIKKGFIFSGAVAE 185
Query: 186 VEDHGYVMDLGIPNTTAFLPKKDANPEIDLGK 217
+HGYV++ G+ AF+P + ++ +G+
Sbjct: 186 ALEHGYVIESGVQGLQAFVPCEKPAQKLHVGQ 217
>UniRef50_Q0IED9 Cluster: Programmed cell death protein 11; n=1;
Aedes aegypti|Rep: Programmed cell death protein 11 -
Aedes aegypti (Yellowfever mosquito)
Length = 1542
Score = 74.1 bits (174), Expect = 3e-12
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 7/156 (4%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKT--- 127
L ++ + G+ L+G V ++ + IKVS+P +L G V ISE+YN L + V+
Sbjct: 74 LQFRTAQEGMLLMGCVYKITKMDIKVSLPGRLYGTVPIMAISEAYNNRLHSLVQKSLGGP 133
Query: 128 -EKVRELSQMFKPGQ--YIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVS 184
E+ L +++ G Y+ + + LT PQ ++S + +G + A V
Sbjct: 134 EEQCPGLEELYHEGDLVYVKIKSKHSEKNHFGLTLDPQDLHSELTCKHLVEGLVLSATVE 193
Query: 185 SVEDHGYVMDLGIPNTTAFLPKKDA-NPEIDLGKSV 219
EDHGY M++GI N AFLP + N ++ +G+++
Sbjct: 194 EEEDHGYQMNVGIRNVRAFLPTHNVRNNKMIVGRNL 229
>UniRef50_A4QSV3 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1808
Score = 72.1 bits (169), Expect = 1e-11
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 79 GINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYV-----EDKTEKVREL 133
G +LG++ +S +++++S+P + G+V A IS K L+ + E+ + +L
Sbjct: 165 GSLVLGQISAISALEVEISLPNNVTGHVKATSISTQLTKKLQDAMDVDQEEEDDDSEIDL 224
Query: 134 SQMFKPGQYIAVSVVEL--------APGNTM--LTTMPQHVNSGKRHTEIKKGAIFQAAV 183
+ + GQY+ VV A G L+ P+ N+G ++ + + ++
Sbjct: 225 TSILSVGQYVRAYVVSTMEEPSTAGAKGKRRIELSLQPELANTGLSSADVVENSTVAGSI 284
Query: 184 SSVEDHGYVMDLGIPNTTAFLPKKDANPEI 213
SSVEDHGYV+DLGI N T FL KK+ + I
Sbjct: 285 SSVEDHGYVVDLGIQNLTGFLSKKEVDKGI 314
>UniRef50_Q6C430 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 1567
Score = 69.7 bits (163), Expect = 6e-11
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKV 130
LS ++ G +LGR++++ VS+P L G V +SE+ N A +E+ E
Sbjct: 86 LSLDNISVGSIILGRIVNIQSTACVVSLPNNLHGFVSCVQVSEALN----AKIEEGEEF- 140
Query: 131 RELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHG 190
+LS K GQ++ SVV+ + L+ +P+ VN ++I Q V S ED G
Sbjct: 141 -DLSDYVKEGQWVRASVVDTSNKRLGLSLLPKDVNRDIEDSDIDANMALQVEVKSKEDKG 199
Query: 191 YVMDLGIPNTTAFLPKKDANPEIDLGKSV 219
YV+ GI F+ KD + E++ G+ V
Sbjct: 200 YVVATGIKGKKGFI--KDTDVELNKGQIV 226
>UniRef50_Q0UD83 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1794
Score = 69.3 bits (162), Expect = 8e-11
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYV------- 123
L+ K L PG +LG+V VS I +++P L+G V +S+ N+ LE +
Sbjct: 143 LNYKKLTPGTIILGQVTDVSHQDIVLALPNNLVGYVPLTAVSDKLNERLEKLLKEEEDGA 202
Query: 124 ---EDKTEKVRE--LSQMFKPGQYIAVSVVELAPGNTM------LTTMPQHVNSGKRHTE 172
ED+ E + L MF GQY+ V + L+ P+ VN G +
Sbjct: 203 DIAEDEDESFEDVHLEDMFTIGQYMRACVTATTDDSARARKRLELSIEPKLVNKGLSKRK 262
Query: 173 IKKGAIFQAAVSSVEDHGYVMDLGIPNT--TAFLPKKDANPEIDLGK 217
+ ++ QA+V S EDHG VMDLG+ ++ FLPK + P+I K
Sbjct: 263 MPINSMVQASVVSNEDHGLVMDLGLDDSKIKGFLPKGELGPKIQHSK 309
>UniRef50_Q010S4 Cluster: rRNA processing protein Rrp5; n=2;
Ostreococcus|Rep: rRNA processing protein Rrp5 -
Ostreococcus tauri
Length = 1947
Score = 68.5 bits (160), Expect = 1e-10
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 19/178 (10%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAY----VEDK 126
L KSLR G+ LLG V V+ + +S+P L G V S+ + + +D+
Sbjct: 109 LKYKSLRSGVKLLGVVSEVTARGLVMSLPDGLRGTVARAEASDVFRGATRSAGAESADDE 168
Query: 127 TEKVRE----------LSQMFKPGQYIAVSVVELAPGNT-----MLTTMPQHVNSGKRHT 171
+E + L +++PGQ + V+ L G T L+ ++V +G
Sbjct: 169 SESSDDEFEGEEETISLESLYEPGQVLRCVVLSLDKGKTGGKRIELSLRLENVCAGIGKD 228
Query: 172 EIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLPKKDANPEIDLGKSVNLNHPLKNAP 229
+ +G++ A V S+EDHGY++D GI T+ FLPKK ++ + + L+ + P
Sbjct: 229 SLVEGSVAPAMVKSIEDHGYILDFGIAGTSGFLPKKSVANDLTIRRGKILDVVITATP 286
>UniRef50_Q7SB69 Cluster: Putative uncharacterized protein
NCU06272.1; n=2; Sordariales|Rep: Putative
uncharacterized protein NCU06272.1 - Neurospora crassa
Length = 1779
Score = 66.5 bits (155), Expect = 6e-10
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYV------- 123
L+ K L G +LG V ++ + I V++P ++G+V IS K LEA
Sbjct: 150 LNFKRLVKGSLVLGSVCAINSLDIAVALPNNIIGHVPITAISAPLTKRLEASAGNDNAEE 209
Query: 124 -EDKTEKVRELSQMFKPGQYI---AVSVVELA----PGNTM----LTTMPQHVNSGKRHT 171
ED+ + +L +F+ GQY+ VS V+ A PG L+ P N+G
Sbjct: 210 SEDENDNDVDLESLFQIGQYVRAYVVSTVDEASTHTPGKAKRHIELSLQPSLANTGMAEQ 269
Query: 172 EIKKGAIFQAAVSSVEDHGYVMDLGIPNT--TAFLPKKDANPEI 213
++ + AA++SVEDHGYVMD+ I ++ FL +K + I
Sbjct: 270 DVVVNSTVMAAIASVEDHGYVMDIEIADSKLQGFLARKQVDKSI 313
>UniRef50_A6S458 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1678
Score = 64.5 bits (150), Expect = 2e-09
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 21/166 (12%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYV----EDK 126
LS K L G +LG+V ++ I +S+P L G V IS+ + +EA +D
Sbjct: 143 LSYKRLVSGSLVLGQVSQINATDIALSLPNNLTGYVPITAISDKVTERVEAIAAAEEDDA 202
Query: 127 TEKVR----ELSQMFKPGQYIAVSVVELAPG-NTM----------LTTMPQHVNSGKRHT 171
++V +L +MF GQY+ VV + NT L+ PQH N+G
Sbjct: 203 DDEVEVEDIDLKKMFSLGQYLRAYVVSTSDDTNTATLGKGKRRIELSLRPQHANNGVTPQ 262
Query: 172 EIKKGAIFQAAVSSVEDHGYVMDLGIPNT--TAFLPKKDANPEIDL 215
+ A+V+SVEDHG +M++G+ +T F+ KD E+ L
Sbjct: 263 NLINNTTLMASVTSVEDHGLIMNIGLEDTGIRGFMGAKDIGYEVVL 308
>UniRef50_A7PW23 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1799
Score = 64.1 bits (149), Expect = 3e-09
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKV 130
++ K++ PG+ L G V V++ + +S+P L G V A SE+++ L ++D E +
Sbjct: 26 ITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRA---SEAFDPLFSNEIKD-AEGI 81
Query: 131 RELSQMFKPGQYIAVSVVEL-------APGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAV 183
L ++F GQ ++ V++L L+ ++ G +++G + A V
Sbjct: 82 F-LPRIFHIGQLVSCVVLQLDDDKKEKGKRRIWLSLRLSLLHKGFTLDALQEGMVLTAYV 140
Query: 184 SSVEDHGYVMDLGIPNTTAFLPKKD--ANPEIDLGK 217
S+EDHGY++ G+P+ T FLPK N EI+ G+
Sbjct: 141 KSIEDHGYILHFGLPSFTGFLPKSSQAENIEINTGQ 176
>UniRef50_A2DQY1 Cluster: S1 RNA binding domain containing protein;
n=1; Trichomonas vaginalis G3|Rep: S1 RNA binding domain
containing protein - Trichomonas vaginalis G3
Length = 1601
Score = 63.7 bits (148), Expect = 4e-09
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 79 GINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKVRELSQMFK 138
G L ++ D I + +P G + I++ + + L+ +++ E++ EL F
Sbjct: 56 GCITLASILSFQDDMIFLELPGNARGTLQLTEINDPFLQRLQHAIKND-EELPELENFFN 114
Query: 139 PGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIP 198
G ++ +V+ L+ P VNS E ++G IF AV S ED GY++DLG
Sbjct: 115 IGDFLMATVISAGTHPVELSIRPNLVNS---MIEPEEGRIFWGAVKSKEDRGYIIDLGKE 171
Query: 199 NTTAFLP 205
N TAFLP
Sbjct: 172 NVTAFLP 178
>UniRef50_Q2UDF1 Cluster: RRNA processing protein Rrp5; n=11;
Pezizomycotina|Rep: RRNA processing protein Rrp5 -
Aspergillus oryzae
Length = 1827
Score = 62.1 bits (144), Expect = 1e-08
Identities = 57/187 (30%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Query: 52 SDEAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHI 111
+DEAQD K + L+ K + PG +LG+V +S I +S+P L G V +
Sbjct: 141 ADEAQD-----KQGVRIEGLNFKRVVPGTMVLGQVSSISAHDIGLSLPNNLTGYVPLTAV 195
Query: 112 SESYNKLLEAYV------------EDKTEKVRELSQMFKPGQYIAVSVVELAPG------ 153
S+ + +E + +D E +LS F GQY+ VV +
Sbjct: 196 SKRLEEKIENLLNEDENAEEDDDDDDDDEDSIDLSDYFYLGQYLRAYVVSVGNNAADASS 255
Query: 154 ----NTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVMDLGI--PNTTAFLPKK 207
LT P+ N G +++ QA+V SVEDHG VMDLGI + F+ KK
Sbjct: 256 KSRKRIELTVDPRQANFGLLKSDLVDNTAVQASVVSVEDHGLVMDLGIEGADIKGFMSKK 315
Query: 208 DANPEID 214
+ +P+ D
Sbjct: 316 EIDPKTD 322
Score = 32.7 bits (71), Expect = 9.0
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKV 130
LS + G+ L GRV V++ ++ + + ++G V +++ Y+K + K E +
Sbjct: 1139 LSLDDITVGMILPGRVTKVTERQVIMQLTDTIVGAVDMIDLTDDYSK-ANPTIYHKNEVL 1197
Query: 131 RE-LSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDH 189
R + + K + I++S L P + +++P ++K + + V V D+
Sbjct: 1198 RACVISVDKANKKISLS---LRPSKVLSSSLPVQDPEITSMEQVKVNDVVRGFVRKVADN 1254
Query: 190 GYVMDLGIPNTTAFLPKKD 208
G + LG TA++ D
Sbjct: 1255 GLFVTLG-HGVTAYVRVSD 1272
>UniRef50_A5DPT1 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1674
Score = 60.1 bits (139), Expect = 5e-08
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 24/169 (14%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVED----- 125
LS K L PG +LG++ V+ + +++++ L+G V IS+ + +E Y ++
Sbjct: 86 LSFKKLFPGTTVLGQISKVNKLDLEIAIGDNLIGYVPISSISDEITRKVELYQQESDSSE 145
Query: 126 -------------KTEKVRELSQMFKPGQYIAVSVVELAPGNT-----MLTTMPQHVNSG 167
K ++ +L +FK G+++ V E + T P++VN
Sbjct: 146 DEEEEGVTRTATMKDNELPDLQSIFKAGEWLRAKVTEAELSQSKKKRIQFTIEPENVNES 205
Query: 168 KRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLPKKD-ANPEIDL 215
++ G + Q +V SVED G +++ G+ + F+ K+ +N IDL
Sbjct: 206 IEDEDLIPGNLLQCSVVSVEDRGVILNTGVSGKSGFISNKELSNANIDL 254
>UniRef50_UPI0000E4A233 Cluster: PREDICTED: similar to Programmed
cell death protein 11, partial; n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Programmed cell
death protein 11, partial - Strongylocentrotus
purpuratus
Length = 527
Score = 58.8 bits (136), Expect = 1e-07
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKV 130
L+SK+L G+ +L V + + +I +S+P V +S + + L+ E +
Sbjct: 87 LTSKTLSEGMLVLAVVQEIHEYEIVLSLPNGQTAFVQITDVSSFFTQQLQELNESNGAED 146
Query: 131 REL---SQMFKPGQYIAVSVVELAP---GNTMLTTMPQH--VNSGKRHTEIKKGAIFQAA 182
++L +++ G + V L G+ + + VNS + IK G
Sbjct: 147 QDLPNIQDVYQVGNLVPCKVKSLGASKDGHRRIQASLDYKEVNSELGISFIKAGMTLHGC 206
Query: 183 VSSVEDHGYVMDLGIPNTTAFLPKKDA 209
VSSVEDHGY +DLGI T AFL K++A
Sbjct: 207 VSSVEDHGYTIDLGIRGTNAFLAKEEA 233
>UniRef50_Q9LHM6 Cluster: Pre-rRNA processing protein RRP5; n=6;
Eukaryota|Rep: Pre-rRNA processing protein RRP5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1765
Score = 52.8 bits (121), Expect = 8e-06
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 80 INLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKVRELSQMFKP 139
+ LLG V V+ I +S+P L G V A +S+ ++ +E +D+ E L +F
Sbjct: 1 MKLLGVVTEVNQKDIVISLPGGLRGLVRASEVSDFTDRGIE---DDENEL---LGDIFSV 54
Query: 140 GQYIAVSVVEL-------APGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYV 192
GQ + V+EL L+ ++ G + G +F A V S+EDHG +
Sbjct: 55 GQLVPCIVLELDDDKKEAGKRKIWLSLRLSLLHKGFSFDSFQLGMVFSANVKSIEDHGSI 114
Query: 193 MDLGIPNTTAFLP-KKDANPE 212
+ G+P+ T F+ D N E
Sbjct: 115 LHFGLPSITGFIEISDDGNQE 135
>UniRef50_Q5KH56 Cluster: RRNA processing-related protein, putative;
n=2; Filobasidiella neoformans|Rep: RRNA
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1484
Score = 52.8 bits (121), Expect = 8e-06
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 29/175 (16%)
Query: 52 SDEAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHI 111
+++A+ + K N + L+ K L PG ++L RV + + + +S+P LL +V I
Sbjct: 97 NEDAKKKEERDKDNIRVEILNYKRLVPGTHVLARVHTILPLHLILSLPNNLLAHVPITEI 156
Query: 112 SESYNKLL---EAYVEDKTEK-------VRELSQMFKPGQYIAVSVVELAP--------- 152
S + +LL EA D+ E+ +L+Q+F PGQY+ V+ L P
Sbjct: 157 SNTLTQLLTAEEAMAVDEGEEESDDESSAPDLAQLFVPGQYVHAKVLTLYPTASQSFISQ 216
Query: 153 ----------GNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVMDLGI 197
LT +P+ VNS +++ G V S ED G+++ +G+
Sbjct: 217 YPITETTKLASRVELTLIPEKVNSEVAKKDLETGYFLVGEVKSEEDKGWIVGVGL 271
>UniRef50_Q05022 Cluster: rRNA biogenesis protein RRP5; n=6;
Saccharomycetales|Rep: rRNA biogenesis protein RRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1729
Score = 50.4 bits (115), Expect = 4e-05
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 125 DKTEKVRELSQMFKPGQYIAVSVVE---LAPGNTM-------LTTMPQHVNSGKRHTEIK 174
DK+ ++ L + F GQ++ SV++ L P LT P VN +K
Sbjct: 196 DKSNELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEPSSVNIYADEDLVK 255
Query: 175 KGAIFQAAVSSVEDHGYVMDLGIPNTTAFLPKKD 208
+I Q AV S+EDHG +D+G+P T F+ KKD
Sbjct: 256 STSI-QCAVKSIEDHGATLDVGLPGFTGFIAKKD 288
Score = 35.1 bits (77), Expect = 1.7
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 25/182 (13%)
Query: 72 SSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKVR 131
S + L+ G + G V +V+D I V + K+ V +S+SY ++
Sbjct: 1170 SHEDLKQGEIVDGIVKNVNDKGIFVYLSRKVEAFVPVSKLSDSY--------------LK 1215
Query: 132 ELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSG-----KRHTEIKKGAIFQAAVSSV 186
E + +KP QY+ VV + + T+ + +G K +++IK G +F+ + SV
Sbjct: 1216 EWKKFYKPMQYVLGKVVTCDEDSRISLTLRESEINGDLKVLKTYSDIKAGDVFEGTIKSV 1275
Query: 187 EDHGYVMDL-GIPNTT--AFLPK-KDANPEIDLGKSVNLNHPLKNAPMRT-PKPIYSLLS 241
D G + L N T A + + D PE DL + +K ++T P+ LS
Sbjct: 1276 TDFGVFVKLDNTVNVTGLAHITEIADKKPE-DLSALFGVGDRVKAIVLKTNPEKKQISLS 1334
Query: 242 LK 243
LK
Sbjct: 1335 LK 1336
>UniRef50_Q54L26 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 804
Score = 49.2 bits (112), Expect = 1e-04
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 16/150 (10%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYV--EDKTE 128
L K L G+ +L V+++ I +S+P L G V IS+S+ + ++ + ED+ E
Sbjct: 157 LLKKDLHTGMVVLATFEQVTEMDITISLPFGLKGYVKFNEISDSFTEWMKETLKREDENE 216
Query: 129 KVR----------ELSQMFKPGQYIAVSVVELAPGNTM----LTTMPQHVNSGKRHTEIK 174
K ++ +MF GQ + ++V L +T+ T P+ VN G
Sbjct: 217 KSTNFRKMKIISDQVRKMFYKGQMLKCAIVGLTDHHTIEGLHCTLRPELVNVGSSIDTFS 276
Query: 175 KGAIFQAAVSSVEDHGYVMDLGIPNTTAFL 204
+ + S++D GY++ G + FL
Sbjct: 277 EDMTIHGCIESIQDKGYIVSFGSKDYNGFL 306
>UniRef50_A3LTH8 Cluster: Part of small ribosomal subunit (SSU)
processosome; n=2; Saccharomycetaceae|Rep: Part of small
ribosomal subunit (SSU) processosome - Pichia stipitis
(Yeast)
Length = 1699
Score = 46.4 bits (105), Expect = 7e-04
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 52 SDEAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHI 111
+DEA++ K N ++ KSL PG +LG++ V + I +++ L+G + I
Sbjct: 77 ADEAEEDSKVQIEN-----ITFKSLIPGTLVLGQITAVGKLDITLALGDNLVGYIPITSI 131
Query: 112 SESYNKLLEAY--VEDKTE--------------KVR-------------ELSQMFKPGQY 142
SE +E Y ED E K+R EL +F GQ+
Sbjct: 132 SEELTIQIEQYEKAEDSDEESEDEEDEQESEDGKIRTATLKSKSRPEFPELKTLFSIGQW 191
Query: 143 IAVSVVELAPGNTM---------LTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVM 193
+ VV+ + LT P+ VN ++ G Q +V SVEDHG +M
Sbjct: 192 LRAKVVQPSSSQNQNQKQKKRIQLTIEPETVNQPLEDEDLIPGNALQCSVKSVEDHGIIM 251
Query: 194 DLGIPNTTAFLPKKDA--NPEIDL 215
+ G + F+ K+ P++D+
Sbjct: 252 NTGRDGLSGFISNKEIKNTPDLDV 275
>UniRef50_A5DT96 Cluster: Putative uncharacterized protein; n=2;
Saccharomycetales|Rep: Putative uncharacterized protein
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 1863
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 132 ELSQMFKPGQYIAVSVVELAPGNTM----LTTMPQHVNSGKRHTEIKKGAIFQAAVSSVE 187
+L MF+ G ++ VVE L+ P+ VN+ ++ G + AV SVE
Sbjct: 323 DLKSMFQVGSWLKAKVVESDNSQKKRRIELSLEPKLVNANIEDEDLIPGNVILCAVKSVE 382
Query: 188 DHGYVMDLGIPNTTAFLPKKD 208
DHG ++D G +AF+ K+
Sbjct: 383 DHGVILDTGFEKFSAFMSNKE 403
Score = 33.9 bits (74), Expect = 3.9
Identities = 17/80 (21%), Positives = 43/80 (53%)
Query: 53 DEAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHIS 112
D+ D +++ + + +L+ K+L PG + G++ +V+ + + +++ L+G V IS
Sbjct: 211 DDDNDDVESDEKKTAVEYLTFKNLLPGSLVFGQIQYVNKLDLVLALENNLVGYVPITSIS 270
Query: 113 ESYNKLLEAYVEDKTEKVRE 132
+ ++ + E+ E+ E
Sbjct: 271 TAITNAIDKFEEESEEEESE 290
>UniRef50_Q23TZ6 Cluster: S1 RNA binding domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: S1 RNA binding
domain containing protein - Tetrahymena thermophila
SB210
Length = 2060
Score = 44.4 bits (100), Expect = 0.003
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 111 ISESYNKLLEAYVEDKTEKVRELSQM--FKPGQYIAVSVV-ELAPGNTMLTTMPQHVNSG 167
++ S NK V D TE +E + + + G+Y+ +V + GN ++ VNSG
Sbjct: 172 VNLSRNKKAFVTVADATEASKEENDLRIYDQGEYLIGEIVPSIKEGNMNVSIKTSKVNSG 231
Query: 168 KRHTEIKKGAIFQAAVSSVEDHGYVMDL-GIPNTTAFLPKKDANPEIDL 215
+ ++I I VSS EDHG ++ G FL K +AN DL
Sbjct: 232 LQISDIHLNMILPGLVSSKEDHGAKIEFNGGEKYFGFLSKDEANNFEDL 280
>UniRef50_Q18038 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1743
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 110 HISESYNKLLEAYVEDKTEKVRELSQMFKPGQYIAVSVVELAPGN----TMLTTMPQHVN 165
H SE K E + E+K E + F+ GQ + V+ GN T P +N
Sbjct: 100 HASEVSKKFTELFNEEKIE----IKNAFQLGQMVPFRVISKKQGNDKGKVKGTCNPARLN 155
Query: 166 SGKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLPK 206
+ G + AV S+E+ G ++D+G+ T F+ K
Sbjct: 156 KHLSPNMLAAGLVLHTAVVSIEEKGAILDVGLDQITGFIEK 196
>UniRef50_UPI0000D57008 Cluster: PREDICTED: similar to CG5558-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG5558-PA, isoform A - Tribolium castaneum
Length = 753
Score = 43.2 bits (97), Expect = 0.006
Identities = 26/95 (27%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 114 SYNKLLEAYVEDKTEKVRELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEI 173
+Y ++L+A++ D ++ V E+ Q+ KP +Y+ V+ +++ N + + KR+T+
Sbjct: 105 AYEQVLKAHLSDVSDDVEEVEQVEKP-RYVRVNTLKITV-NEAIEGFREEGWVLKRYTDS 162
Query: 174 KKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLPKKD 208
+ F AVS++ + +++DL IP F PK +
Sbjct: 163 ENYLGFLEAVSNLGSNEFMVDLHIPYLLIFPPKTE 197
>UniRef50_A0B781 Cluster: Conserved repeat domain; n=1; Methanosaeta
thermophila PT|Rep: Conserved repeat domain -
Methanosaeta thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 1624
Score = 41.1 bits (92), Expect = 0.026
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 100 CKLLGNVMACHISESYNKLLEAYVEDKTEKVRELSQMFKPGQYIAVSVVELAPGNTMLTT 159
C LG+V A HI S N +++ Y ++ LS K +A VE+A +LT
Sbjct: 679 CWYLGDVQAMHIDLSLNTIVDDYAPGAVLELNYLSNSDKKSISVATGPVEIAEPGLILTK 738
Query: 160 MPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLPKK-DANPE 212
P + T I + S + V+ IP+ T LP+ +PE
Sbjct: 739 TPALRGMARGDTSRLTLRINHSQESRCDAWNVVLRESIPSNTGILPESVKTSPE 792
>UniRef50_A7AQQ0 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 729
Score = 40.3 bits (90), Expect = 0.045
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 59 LKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKL 118
LK+ KL + L G LLG V ++ +++ +P L+G V A S+ +
Sbjct: 47 LKSGKLFQRGRLPTYDKLEAGSLLLGSVAVIAPSGLRIHLPGGLVGFVRA---SDGVD-- 101
Query: 119 LEAYVEDKTEKVRELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAI 178
+ + + + LS G + SV+E+ +L+ P +N G + G +
Sbjct: 102 IPESARQRPDTI--LSGCVSVGSRVVCSVLEVKRHFVLLSMRPSVINKGLSSGALTTGML 159
Query: 179 FQAAVSSVEDHGYVM--DLGIPNTTAFLPKKDANPEIDLGKSVNLNHPLKN 227
A+V + EDHG ++ LG ++ + D D+ K+ N N PL N
Sbjct: 160 LPASVRAHEDHGIILGFHLGDSSSIGGFVRYD-----DVEKTENDNPPLDN 205
>UniRef50_Q7QT14 Cluster: GLP_675_28554_23026; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_28554_23026 - Giardia lamblia
ATCC 50803
Length = 1842
Score = 39.1 bits (87), Expect = 0.10
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 18/142 (12%)
Query: 72 SSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKVR 131
++ L G +L V +V + V++P +LGNV + +S E+VR
Sbjct: 14 AASQLHRGTMVLAIVANVRPEYMLVNLPFGILGNVSDVNAIDS-------------ERVR 60
Query: 132 ELSQMFKPGQYI-AVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHG 190
L++++K G Y+ V V + A G +L P S + + ++ + +VEDHG
Sbjct: 61 PLTELYKAGDYVLGVVVGQDATGKPILGLKP----SLFHQRDFSRKSLVVCQIETVEDHG 116
Query: 191 YVMDLGIPNTTAFLPKKDANPE 212
++ ++ T+ K PE
Sbjct: 117 WIAEVKDARETSCFLSKSRVPE 138
>UniRef50_Q5CW10 Cluster: RRP5 like protein involved in rRNA
biogenesis with 7 S1 domains and 5 HAT repeats; n=4;
Cryptosporidium|Rep: RRP5 like protein involved in rRNA
biogenesis with 7 S1 domains and 5 HAT repeats -
Cryptosporidium parvum Iowa II
Length = 2002
Score = 38.3 bits (85), Expect = 0.18
Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 71 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEK 129
+ + L+ G L G + HVS+ ++ +S+P + + E + +E + E K
Sbjct: 42 IERRDLKLGTLLFGVIDHVSEKELIISLPGSNTAIISIENTLEDSRTIPIELFQE---LK 98
Query: 130 VRELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSG-KRHTEIKK--GAIFQAAVSSV 186
+ L F GQ++ +++ +T P +N+G +++ G + A + S
Sbjct: 99 KKSLEDRFSVGQFVNGAIISNNKIKNNITLKPSILNAGLNSNSKCLNVFGYVISALIISK 158
Query: 187 EDHGYVMDLGIPNT-TAFLPKKDAN-PEIDLGK--SVNLNHPLKNAPMRTPKPIY 237
E+HG+ + GI T F+ +++ E LG+ V+++ K + PIY
Sbjct: 159 ENHGFNIYTGIQGVKTVFMKVEESEFKEYRLGQILPVSIHQFFKEKSLLICTPIY 213
>UniRef50_UPI000049887B Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 784
Score = 37.5 bits (83), Expect = 0.32
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 72 SSKSLRPGINLL-GRVIHVSDVKIKVSMPC--KLLGNVMACHISESYNKLLEAYVEDKTE 128
+S++L P I++L R+ HV + V++ K+ G + E N L E Y+ E
Sbjct: 522 ASRALLPIISILVQRITHVFERLFNVALDVIEKVFGEKSSLQNGELSNALKEVYINFAKE 581
Query: 129 KVRELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTE 172
K+R +M K VSVV+ + ++ T M + + K E
Sbjct: 582 KLRRCEKMLKDDLNSFVSVVDWSMLSSTTTVMEEENDDEKTQDE 625
>UniRef50_Q93138 Cluster: ORF1; n=1; Bombyx mori|Rep: ORF1 - Bombyx
mori (Silk moth)
Length = 460
Score = 33.9 bits (74), Expect = 3.9
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 123 VEDKTEKVRELSQMFKPGQYIAVSVVELAPGN--TMLTTMPQHVNSGKRHTEIKKGAIFQ 180
+ + +EK+ EL QMF+ + VV PG TT+ + S K E G + +
Sbjct: 171 LRENSEKMEELKQMFRSQKATYADVVVSQPGRQPPKCTTLHSIMVSSKDENETGDGILTE 230
Query: 181 AAVSSVEDHGYV 192
++ ED G+V
Sbjct: 231 LRKTASEDEGWV 242
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 33.9 bits (74), Expect = 3.9
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 67 NLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPC-KLLGNVMAC--HISESYNKLLEAYV 123
++I ++ +S R N G ++ + + K + SM K+ V+A I +
Sbjct: 84 DVIEINGESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRTFIT 143
Query: 124 EDKTEKVRELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVN-SGK-RHTEIKKGAI--- 178
+DK++KV ++ + P I+ ++++ PGN T HVN +G E K+G+
Sbjct: 144 DDKSKKVGDVWAVSVPDMKIS-EIIKMQPGNKAYITAGSHVNQTGTISKIEAKEGSSANL 202
Query: 179 --FQAAVSSVEDHGYVM 193
FQ S+++DH +++
Sbjct: 203 VHFQEGFSTIKDHVFMI 219
>UniRef50_A3DEF4 Cluster: Putative uncharacterized protein; n=1;
Clostridium thermocellum ATCC 27405|Rep: Putative
uncharacterized protein - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 430
Score = 33.5 bits (73), Expect = 5.1
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 80 INLLGRVIHVSDVKIKVSMPC-KLLGNVMACHISESYNKLLEAYVEDKT-EKVRELSQMF 137
I LG++ +KV P K +GN ++SY ++ + T ++ EL
Sbjct: 94 IEKLGKLFKNKLYNVKVKRPAEKKIGNSKDDKNAQSYYEIQIDFDATMTYREIMELVDYL 153
Query: 138 KPG-QYIAVSVVELAP-GNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVMDL 195
+ G + + ++ E++P GN P N+ + TE + A ++ D V+DL
Sbjct: 154 EGGTRKVKITKFEVSPLGNKQANATPTPQNTAEPQTESDEQNAQNALAKAIFDPNEVLDL 213
Query: 196 GIPNTTAFLPKKDANPEIDLGK 217
G+ + +++A+ D +
Sbjct: 214 GMTVCMYSMNRENADKIYDFSR 235
>UniRef50_A0PAH0 Cluster: Growth hormone receptor; n=1; Elaphe
quadrivirgata|Rep: Growth hormone receptor - Elaphe
quadrivirgata (Japanese four-lined ratsnake)
Length = 207
Score = 33.1 bits (72), Expect = 6.8
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 147 VVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLPK 206
V + P +++ + Q + +GK +E ++ A+ Q + D+ Y +L + P
Sbjct: 102 VSNITPRGSVVLSPGQKMKTGKAQSEAQREAVAQCQPTLAMDNAYFCELDVKKCVTVTPP 161
Query: 207 KDANPEIDL 215
KD PE+ +
Sbjct: 162 KD-EPEVQV 169
>UniRef50_A5V0B5 Cluster: RNA binding S1 domain protein; n=4;
Chloroflexaceae|Rep: RNA binding S1 domain protein -
Roseiflexus sp. RS-1
Length = 514
Score = 33.1 bits (72), Expect = 6.8
Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 124 EDKTEKVRELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAV 183
E + EK ++ Q+ GQ V+E+ ++ + G++ +++KG I + +
Sbjct: 275 EGRVEKAEDVVQV---GQTYTFKVLEVDAAGARISLSLRRAQRGQKLQQLEKGQILEGTI 331
Query: 184 SSVEDHGYVMDLGI 197
S + G +D+G+
Sbjct: 332 SGLAPFGAFVDIGV 345
>UniRef50_Q7NBG0 Cluster: Isoleucyl-tRNA synthetase; n=1; Mycoplasma
gallisepticum|Rep: Isoleucyl-tRNA synthetase -
Mycoplasma gallisepticum
Length = 901
Score = 33.1 bits (72), Expect = 6.8
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 57 DYLKTHKLNNNLIFLSSKSLRPGINLLGRVI--HVSDVKIKVSMPCKL-LGNVMAC-HIS 112
DY H++ N++I +S+ R N L R I +++D K +L L +++ H++
Sbjct: 628 DYSNDHRIGNHIIEQNSEIYRKIRNSLFRYILGNLNDFDFKPLDQYQLSLADLLTINHVN 687
Query: 113 ESYNKLLEAYVE-DKTEKVRELSQM 136
+S+ K+ +AY+ D E +E++QM
Sbjct: 688 KSFKKIDQAYLNYDYLEITKEVNQM 712
>UniRef50_Q4FLB1 Cluster: Sarcosine dehydrogenase; n=3;
Bacteria|Rep: Sarcosine dehydrogenase - Pelagibacter
ubique
Length = 814
Score = 32.7 bits (71), Expect = 9.0
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 47 DDGYLSDEAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNV 106
+ ++ E+ +K KLN I LS K +PG LL +H + ++ K++G
Sbjct: 704 ETNFIGKESLLKIKDQKLNRRFIILSLKDSKPGTPLL---LHEEPIYLE----DKIIGRT 756
Query: 107 MACHISESYNKLLE-AYVED--KTEKVRELSQMFKPGQYIAVSVVELAP 152
+ + S +Y K L YV E++ +++ + + ++VE+AP
Sbjct: 757 TSGNYSFNYKKNLSFGYVSSIHSNEELSKMNLYIEVAKQKLPALVEIAP 805
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.315 0.133 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,942,649
Number of Sequences: 1657284
Number of extensions: 10403118
Number of successful extensions: 18493
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 18397
Number of HSP's gapped (non-prelim): 78
length of query: 250
length of database: 575,637,011
effective HSP length: 99
effective length of query: 151
effective length of database: 411,565,895
effective search space: 62146450145
effective search space used: 62146450145
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 71 (32.7 bits)
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