Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000755-TA|BGIBMGA000755-PA|undefined
(230 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g21160.4 68417.m03061 zinc finger and C2 domain protein (ZAC)... 32 0.37
At4g21160.3 68417.m03060 zinc finger and C2 domain protein (ZAC)... 32 0.37
At4g21160.2 68417.m03059 zinc finger and C2 domain protein (ZAC)... 32 0.37
At4g21160.1 68417.m03058 zinc finger and C2 domain protein (ZAC)... 32 0.37
At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger) fa... 30 1.1
At1g54920.2 68414.m06269 expressed protein 30 1.1
At3g26050.1 68416.m03244 expressed protein 29 2.0
At1g69220.2 68414.m07926 serine/threonine protein kinase, putati... 29 2.0
At1g69220.1 68414.m07925 serine/threonine protein kinase, putati... 29 2.0
At1g32860.1 68414.m04049 glycosyl hydrolase family 17 protein si... 29 3.5
At3g54710.1 68416.m06053 expressed protein 28 6.1
At1g62085.1 68414.m07006 mitochondrial transcription termination... 27 8.0
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 27 8.0
>At4g21160.4 68417.m03061 zinc finger and C2 domain protein (ZAC)
identical to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 337
Score = 31.9 bits (69), Expect = 0.37
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 61 LSMISTPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVSLN 120
LS+ WS E DS + N+ ++ G++ P S + + S
Sbjct: 68 LSVTLDEWSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMRFIRSKYEHQ 127
Query: 121 ESHVMKPTIRATQSMSSGTLSSWTLESFTSTGLIDS 156
E +KP++R T S T + L S S ++DS
Sbjct: 128 E--FLKPSLRITSVRGSSTKTPAFLSSSLSKKIVDS 161
>At4g21160.3 68417.m03060 zinc finger and C2 domain protein (ZAC)
identical to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 337
Score = 31.9 bits (69), Expect = 0.37
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 61 LSMISTPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVSLN 120
LS+ WS E DS + N+ ++ G++ P S + + S
Sbjct: 68 LSVTLDEWSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMRFIRSKYEHQ 127
Query: 121 ESHVMKPTIRATQSMSSGTLSSWTLESFTSTGLIDS 156
E +KP++R T S T + L S S ++DS
Sbjct: 128 E--FLKPSLRITSVRGSSTKTPAFLSSSLSKKIVDS 161
>At4g21160.2 68417.m03059 zinc finger and C2 domain protein (ZAC)
identical to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 337
Score = 31.9 bits (69), Expect = 0.37
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 61 LSMISTPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVSLN 120
LS+ WS E DS + N+ ++ G++ P S + + S
Sbjct: 68 LSVTLDEWSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMRFIRSKYEHQ 127
Query: 121 ESHVMKPTIRATQSMSSGTLSSWTLESFTSTGLIDS 156
E +KP++R T S T + L S S ++DS
Sbjct: 128 E--FLKPSLRITSVRGSSTKTPAFLSSSLSKKIVDS 161
>At4g21160.1 68417.m03058 zinc finger and C2 domain protein (ZAC)
identical to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 337
Score = 31.9 bits (69), Expect = 0.37
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 61 LSMISTPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVSLN 120
LS+ WS E DS + N+ ++ G++ P S + + S
Sbjct: 68 LSVTLDEWSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMRFIRSKYEHQ 127
Query: 121 ESHVMKPTIRATQSMSSGTLSSWTLESFTSTGLIDS 156
E +KP++R T S T + L S S ++DS
Sbjct: 128 E--FLKPSLRITSVRGSSTKTPAFLSSSLSKKIVDS 161
>At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 535
Score = 30.3 bits (65), Expect = 1.1
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 65 STPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLL---ESAVSLNE 121
+TP S+ +W + S+NS + L ++S S T+P S + +N + + E+ S
Sbjct: 185 TTP-STRSWPTVP--SSNSPRVL--QTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTS 239
Query: 122 SHVMKPTIRATQSMSSGTLSSWTL-ESFTSTGLIDSDILKVEYPWSPCTDMS--GTDVYP 178
+ M+ ++ + M + + + T E +T + ++ W T S P
Sbjct: 240 TSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVP 299
Query: 179 SSVDTFESRKGSRAAMNTLSKRELFPMN 206
+S S SR ++S R FPM+
Sbjct: 300 TSTTNVPSSNSSRVLQTSMSTRGTFPMS 327
>At1g54920.2 68414.m06269 expressed protein
Length = 890
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 67 PWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAV 117
PW + W+ V + ++ LT K S +G F VS T +S+V
Sbjct: 280 PWDNGGWEFKVAEAKEPKRDLTNKESNGWGFGFGFEPVSKLETTNSFQSSV 330
>At3g26050.1 68416.m03244 expressed protein
Length = 533
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 91 SSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQSMSSGTLSS 142
+STS P S SK + + LES+V + H +K T + + S S+ +LS+
Sbjct: 164 NSTSLSKERPPSSSGSKVSSSKLESSVVIELDHSLKNTKKESSSSSTRSLSA 215
>At1g69220.2 68414.m07926 serine/threonine protein kinase, putative
identical to serine/threonine kinase [Arabidopsis
thaliana] gi|2352084|gb|AAB68776
Length = 809
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 75 SAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQS 134
S V S TL PKSS G T P S +N+ T +LN H+ T+ A +
Sbjct: 506 SVVAPSLEDTSTLGPKSSEELGITVP--SKPPQNS-TEAPLTSTLNRQHITGNTVLAGEG 562
Query: 135 MSSGTL 140
GT+
Sbjct: 563 GDFGTM 568
>At1g69220.1 68414.m07925 serine/threonine protein kinase, putative
identical to serine/threonine kinase [Arabidopsis
thaliana] gi|2352084|gb|AAB68776
Length = 836
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 75 SAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQS 134
S V S TL PKSS G T P S +N+ T +LN H+ T+ A +
Sbjct: 533 SVVAPSLEDTSTLGPKSSEELGITVP--SKPPQNS-TEAPLTSTLNRQHITGNTVLAGEG 589
Query: 135 MSSGTL 140
GT+
Sbjct: 590 GDFGTM 595
>At1g32860.1 68414.m04049 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase precursor GI:4097948 from
[Oryza sativa]
Length = 426
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/66 (22%), Positives = 31/66 (46%)
Query: 99 TPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQSMSSGTLSSWTLESFTSTGLIDSDI 158
TPF ++ +T+ ++LN+S + + A Q + S +++ + + T I
Sbjct: 105 TPFLPATNITCITIGNEILALNDSSLTTNLLPAMQGVHSALITAGLSDQISVTTAHSLSI 164
Query: 159 LKVEYP 164
LK +P
Sbjct: 165 LKSSFP 170
>At3g54710.1 68416.m06053 expressed protein
Length = 486
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/68 (25%), Positives = 31/68 (45%)
Query: 91 SSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQSMSSGTLSSWTLESFTS 150
S+ S +TP +S+ TL L + + L ++R+T S++ G S ++F
Sbjct: 243 STPSKDLSTPIRLMSATPTLQLSKRCIELTPEGGDDNSLRSTNSLARGPSRSLNFDTFEE 302
Query: 151 TGLIDSDI 158
+ DI
Sbjct: 303 DAIEKDDI 310
>At1g62085.1 68414.m07006 mitochondrial transcription termination
factor family protein / mTERF family protein contains
Pfam profile PF02536: mTERF
Length = 461
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 144 TLESFTSTGLIDSDILKVEYPWSPCTDMSGTDVYPSSVDTFESRKGSRAAMNTLSKR 200
T E+ GL++ D+L V + C + S + +S++TF SR + ++KR
Sbjct: 300 TWETLKKCGLLEDDVLSVLKKFPQCINASEQKIM-NSIETFLGLGFSRDEVAMIAKR 355
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 27.5 bits (58), Expect = 8.0
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 83 SEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQSMSSGTLSS 142
+E L P ST AT V ++ L +E +S + + P +RA +S+ L +
Sbjct: 20 AENLLKPHFSTD--ATLSLLEVM-ESLLATVEQDLSSSVQKALHPPMRAL--VSADLLRN 74
Query: 143 WTLESFTSTGLIDSDILKVEYPWSPCTDMSGTDVYPSSVDTFE 185
+ S ++I+++ P +P D D++ +++ FE
Sbjct: 75 PDSDVRVSVVSCLTEIMRITAPEAPYNDEQMKDIFQVTIEAFE 117
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.124 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,368,170
Number of Sequences: 28952
Number of extensions: 143684
Number of successful extensions: 381
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 377
Number of HSP's gapped (non-prelim): 13
length of query: 230
length of database: 12,070,560
effective HSP length: 79
effective length of query: 151
effective length of database: 9,783,352
effective search space: 1477286152
effective search space used: 1477286152
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)
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