GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000755-TA|BGIBMGA000755-PA|undefined
         (230 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    29   0.15 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   3.3  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 28.7 bits (61), Expect = 0.15
 Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 3/129 (2%)

Query: 74  DSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQ 133
           + A    AN E+ + P  ++ +  T PF    S  T  +  S +S   SH  + + R+  
Sbjct: 814 EEAAAVGANVEQRVPPLPNSQHYFTQPFSP--SGGTTPVPVSLLSPASSHYSQRSARSPY 871

Query: 134 SMSSGTLSSWTLESFTSTGLIDSDILKVEYPWSPCTDMSGTDVYPSSVDTFESRKGSRAA 193
                 ++S    +    G   + +LK  Y  S    ++  D Y    +      G RA 
Sbjct: 872 GGCGSGIAS-PPAAIHGGGSRTTTVLKRTYSNSSINSLNSLDNYGDGGEAGTGDSGKRAR 930

Query: 194 MNTLSKREL 202
           M+ L   +L
Sbjct: 931 MHALGNSDL 939


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 11/114 (9%)

Query: 68  WSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKP 127
           W    W    F ++ ++ T TPKS T  GAT    S ++     L         +    P
Sbjct: 466 WPDSFWR---FYNSKTKSTHTPKSITYKGAT----SANTNEMCNLFADRF----ADCFSP 514

Query: 128 TIRATQSMSSGTLSSWTLESFTSTGLIDSDILKVEYPWSPCTDMSGTDVYPSSV 181
            +  T ++ +  +++       ST  IDS+I+         +   G D  PS+V
Sbjct: 515 AMNDTDTIDAALVNTPAGAINMSTPFIDSEIVLSALAQLKPSFAPGPDGIPSTV 568


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.124    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,610
Number of Sequences: 2123
Number of extensions: 5812
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 230
length of database: 516,269
effective HSP length: 62
effective length of query: 168
effective length of database: 384,643
effective search space: 64620024
effective search space used: 64620024
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 47 (23.0 bits)