Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000754-TA|BGIBMGA000754-PA|IPR005289|GTP-binding,
IPR002917|GTP-binding protein, HSR1-related
(333 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0165 + 14305885-14306007,14306538-14306642,14306792-143068... 132 5e-31
05_04_0401 - 20982923-20983106,20983129-20983186,20983322-209835... 93 3e-19
10_08_1002 + 22160109-22160264,22160374-22160484,22160612-221606... 86 3e-17
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 66 3e-11
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 44 2e-04
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689... 39 0.005
08_02_0627 + 19449196-19449651,19449723-19449861,19450260-194503... 38 0.015
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 37 0.026
06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089 36 0.046
11_06_0499 + 24354810-24355212,24355677-24355735,24355846-243559... 35 0.11
07_01_0075 - 558829-560859 34 0.14
06_01_0668 - 4882174-4884204 34 0.14
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 34 0.18
05_07_0147 - 28022018-28022104,28022207-28022287,28022513-280226... 33 0.32
04_03_0687 + 18713603-18713962,18715318-18715539,18717068-187172... 32 0.56
03_02_0315 - 7401708-7401860,7401962-7402123,7402211-7402279,740... 32 0.56
05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323... 32 0.74
08_01_0709 + 6265949-6266452,6267697-6267786,6268257-6268402,626... 31 0.98
03_05_0491 - 24868261-24869383,24869482-24869561,24870193-248702... 31 1.7
04_03_0240 - 13228046-13228170,13228247-13228307,13229301-132293... 30 2.3
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 30 2.3
10_08_0015 + 14116129-14116691,14116810-14117128,14117588-141186... 30 3.0
09_04_0344 + 16870922-16871035,16871200-16872054 30 3.0
09_04_0343 - 16831789-16832643,16832782-16832826 30 3.0
05_01_0372 - 2913518-2916562,2916674-2917528 29 4.0
04_04_0552 + 26195452-26195614,26195682-26195725,26198390-26199541 29 4.0
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 29 5.2
03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324,874... 29 5.2
07_03_0759 - 21299502-21299807,21299889-21300039,21300151-213003... 29 6.9
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 29 6.9
06_01_0102 + 834660-834911,835460-835568,835891-836006,836116-83... 29 6.9
12_02_1133 - 26368323-26369457,26369556-26369635,26370145-263702... 28 9.2
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 28 9.2
02_04_0475 + 23229046-23229480,23230062-23231205,23232187-232323... 28 9.2
>11_04_0165 +
14305885-14306007,14306538-14306642,14306792-14306869,
14307710-14307757,14308173-14308314,14308394-14308464,
14309210-14309306,14309517-14309728,14311995-14312267
Length = 382
Score = 132 bits (318), Expect = 5e-31
Identities = 90/237 (37%), Positives = 135/237 (56%), Gaps = 18/237 (7%)
Query: 24 LRWFPGHMNKGLKQMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAKPHILVLNKRD 83
+ WFPGHM + ++ +LK D V+EV DARIP + N L +K IL LNK+D
Sbjct: 10 VNWFPGHMAAASRAIRDRLKLADLVLEVRDARIPLSSANEDLQPVLA-SKRRILALNKKD 68
Query: 84 LVITSLIPRIK---DQLKAEQNVDNVVFTNSKDQFCRG-LKTIKPL----MVDLIKNSNR 135
L +++ R + K + N T+S QF G L + L ++ L++ +
Sbjct: 69 LANPNIMNRWLHHFESCKQDCISINAHSTSSVSQFSWGHLVEVYYLYFYKLLGLVEFKLK 128
Query: 136 YNRSEELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLP-------VGAVAGVTRSLMM 188
S+E VM++GVPNVGKS++IN + R ++ R + VG + GVT+ +
Sbjct: 129 EAISKEPTLLVMVVGVPNVGKSALINSIH-RIVTSRFPVQDKNKRATVGPLPGVTQDIA- 186
Query: 189 KMRINNDPCIFMLDTPGILEPSVTNIEMGLKLALCAALQDHLVGEEIIADYLLYWLN 245
+I++ P I++LDTPG+L PS+ ++E GLKLAL A++D +VGEE IA YLL LN
Sbjct: 187 GYKISSQPSIYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIAKYLLSLLN 243
>05_04_0401 -
20982923-20983106,20983129-20983186,20983322-20983503,
20983637-20983752,20984148-20984234,20984334-20984477,
20984556-20984672,20984790-20984936,20985717-20985938,
20986919-20987072,20987583-20987632,20987870-20987921,
20987985-20988211
Length = 579
Score = 93.1 bits (221), Expect = 3e-19
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 16/227 (7%)
Query: 24 LRWFPGHMNKGLKQMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAKPHILVLNKRD 83
++W+PGH+ K K+++ +LK +D VIEV DARIP +P + L G + I+V+N+ D
Sbjct: 283 VQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPLATSHPKMDAWL-GNRKRIIVMNRED 341
Query: 84 LVITSLIPRIKDQLKAEQNVDNVVFTNSKDQFCRGLKTIKPLMVDLIKNSNRYNRSEEL- 142
+V ++ A Q VV++N Q G + + L N R + L
Sbjct: 342 MV-SNEDRNAWASYFANQGT-KVVYSNG--QLGMGTMKLGRMAKSLASTVNTKRREKGLL 397
Query: 143 --EYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFM 200
I+G PNVGKSS+IN L R + P GVTR L +R +D + +
Sbjct: 398 PRAVRAGIVGYPNVGKSSLINRLLK-----RRMCPAAPRPGVTRELKW-VRFGSD--LEL 449
Query: 201 LDTPGILEPSVTNIEMGLKLALCAALQDHLVGEEIIADYLLYWLNKH 247
LD+PGIL +++ +KLA+C + + +A L+ L +H
Sbjct: 450 LDSPGILPMRISDQTAAIKLAICDDIGERSYDFADVAAILVQLLVRH 496
>10_08_1002 +
22160109-22160264,22160374-22160484,22160612-22160689,
22160774-22160921,22161007-22161077,22161430-22161526,
22161603-22161790,22161960-22162223
Length = 370
Score = 86.2 bits (204), Expect = 3e-17
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 16/234 (6%)
Query: 26 WFPGHMNKGLKQMQRKLKSVDCVIEVHDARIPFTGR-NPIFTSTLTGAKPHILVLNKRDL 84
W+ HM + ++ +L VD V+EV DAR+P P+ + + ++VLNK DL
Sbjct: 23 WYGRHMAAADRAIRSRLPLVDLVLEVRDARVPAASAFAPLRRRSPEPDRRRLVVLNKADL 82
Query: 85 VITSLIPRIKDQLKAEQNVDNVVFTNSKDQFCRGLKTIKPLMVDLIKNSNRYNRSEELEY 144
S + +K Q + V NS + G+K + + I+ +
Sbjct: 83 ADPSQTEKWMAYMK--QTSCSCVALNSHSR--EGIKELLNAVRAKIREIKL--GESDCTG 136
Query: 145 NVMIIGVPNVGKSSMINMLRSRNISG-------RHVLPVGAVAGVTRSLMMKMRINNDPC 197
V+++G+PNVGKS+++N + G +H + V + G T+ + ++ + P
Sbjct: 137 TVLLVGIPNVGKSAIVNAMHRIGRIGAAEKGKLKHAI-VSSHPGETKDIS-GYKVASHPN 194
Query: 198 IFMLDTPGILEPSVTNIEMGLKLALCAALQDHLVGEEIIADYLLYWLNKHRKFK 251
I++LDTPG+L P N E G LAL A++D ++ E IA +LL LN +K
Sbjct: 195 IYVLDTPGVLSPVFFNDESGPLLALTGAIKDSMMQEFEIAQFLLAILNSRETYK 248
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 66.5 bits (155), Expect = 3e-11
Identities = 69/213 (32%), Positives = 107/213 (50%), Gaps = 32/213 (15%)
Query: 36 KQMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAKPH---ILVLNKRDLVITSLIPR 92
K++ + +++ D ++EV DAR P R + A P +L+LNK DLV + +
Sbjct: 143 KELVKVIEASDVILEVLDARDPLGTRCIDMEKMVRKADPSKRIVLLLNKIDLVPKESVEK 202
Query: 93 IKDQLKAEQNVDNVVFT-NSKDQFCR-GLKTIK-------PLMVD------LIKNSNRYN 137
L+ E + V F N+++Q + G K+ K P D LIK Y+
Sbjct: 203 WLTYLREE--MPTVAFKCNTQEQRTKLGWKSSKIDKSSNIPQSSDCLGAENLIKLLKNYS 260
Query: 138 RSEELEY--NVMIIGVPNVGKSSMINML-RSRNISGRHVLPVGAVAGVTRSLMMKMRINN 194
RS EL+ V I+G+PNVGKSS+IN L RSR V+ VG+ GVTRS+ +
Sbjct: 261 RSHELKLAITVGIVGLPNVGKSSLINSLKRSR------VVNVGSTPGVTRSM---QEVQL 311
Query: 195 DPCIFMLDTPGILEPSVTNIEMGLKLALCAALQ 227
D + +LD PG++ +N + + L C ++
Sbjct: 312 DKKVKLLDCPGVVMLKSSNSGVSVALRNCKRVE 344
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 43.6 bits (98), Expect = 2e-04
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 37 QMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAKPH---ILVLNKRDLVITSLIPRI 93
++ + + S D V++V DAR P R L H + +LNK DLV
Sbjct: 215 ELYKVIDSSDVVVQVLDARDPMGTRCYHLEKHLKENAKHKHLVFLLNKCDLVPAWAT--- 271
Query: 94 KDQLKA-EQNVDNVVFTNS-KDQFCRGLKTIKPLMVDLIKNSNRYNRSEELEYNVMIIGV 151
K L+ ++ + F S F +G ++ +++ R +S++ +V +G
Sbjct: 272 KGWLRTLSKDYPTLAFHASINSSFGKGS------LLSVLRQFARL-KSDKQAISVGFVGY 324
Query: 152 PNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPGIL 207
PNVGKSS+IN LRS+++ V P+ V + + + R IF++D PG++
Sbjct: 325 PNVGKSSVINTLRSKSVC--KVAPIPGETKVWQYITLTKR------IFLIDCPGVV 372
>01_01_0879 +
6896587-6896701,6896819-6897005,6897475-6897774,
6897877-6898133,6898596-6898825,6899122-6899247,
6900195-6900374,6901079-6901216,6901515-6901670,
6902409-6902699,6902923-6903162
Length = 739
Score = 39.1 bits (87), Expect = 0.005
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Query: 141 ELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTR-SLMMKMRINNDPCIF 199
+L + I+G PNVGKS+++N L + + VL VG AG+TR S+ + + +N ++
Sbjct: 309 KLPLQLAIVGRPNVGKSTLLNTL----LQEQRVL-VGPEAGLTRDSIRTQFQFDN-RTVY 362
Query: 200 MLDTPGILEPS 210
++DT G +E S
Sbjct: 363 LVDTAGWMERS 373
>08_02_0627 +
19449196-19449651,19449723-19449861,19450260-19450381,
19450685-19450888,19450981-19451040,19451628-19451820,
19451880-19451998,19452189-19452413,19452534-19452728
Length = 570
Score = 37.5 bits (83), Expect = 0.015
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 128 DLIKNSNRYNRSEELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLM 187
D + +N Y++ + V IIG PNVGKSS++N + + S R + V +AG TR ++
Sbjct: 291 DALDTAN-YDKLLQSGLQVAIIGRPNVGKSSLLN---AWSKSERAI--VTEIAGTTRDVV 344
Query: 188 -MKMRINNDPCIFMLDTPGILE 208
+ I+ P I +LDT GI E
Sbjct: 345 EANVSIHGIP-ITLLDTAGIRE 365
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 36.7 bits (81), Expect = 0.026
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 22/124 (17%)
Query: 148 IIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPGIL 207
++G PNVGKSS++ +L SG+ V + TR ++M ++N + DTPG+L
Sbjct: 249 LVGSPNVGKSSLVRILS----SGKP--EVCSYPFTTRGILMGHIVSNHERFQVTDTPGLL 302
Query: 208 ---EPSVTNIEMGLKLAL-----CAALQDHLVGEEI---IAD-YLLYWLNKHRKFKYVDF 255
+ NIE L LA+ A L H + E+ +AD Y+ Y KH K ++ D
Sbjct: 303 TRDDDERNNIEK-LTLAVLSHLPIAVLYVHDLSEDCGTSVADQYITY---KHIKERFGDR 358
Query: 256 MGLD 259
+ LD
Sbjct: 359 LWLD 362
>06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089
Length = 681
Score = 35.9 bits (79), Expect = 0.046
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 145 NVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTP 204
NV +IG N GKS++IN + L AV G T ++ + M DTP
Sbjct: 409 NVWVIGAQNAGKSTLINAFAKKQGVKITRLTEAAVPGTTLGILRITGVLPAKA-KMYDTP 467
Query: 205 GILEPSVTNIEM 216
G+L P + ++ +
Sbjct: 468 GLLHPYIMSMRL 479
>11_06_0499 +
24354810-24355212,24355677-24355735,24355846-24355929,
24356040-24356337,24357026-24357203,24357686-24357746,
24358209-24358391,24358581-24358742,24358844-24359037,
24359354-24359504,24359551-24359578,24359845-24360117,
24360660-24360724
Length = 712
Score = 34.7 bits (76), Expect = 0.11
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 131 KNSNRYNRSEELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKM 190
K S + + L V IIG PNVGKS++ N L + G + V GVTR +
Sbjct: 148 KTSASKHIPDNLLPRVAIIGRPNVGKSALFNRL----VGGNRAIVVDE-PGVTRDRLYGR 202
Query: 191 RINNDPCIFMLDTPGILEPSVTNIEMGLKLAL 222
D ++DT G++ S + + +LA+
Sbjct: 203 SYWGDREFMVIDTGGVITLSKSQAGVMEELAI 234
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIF-MLDTP 204
+ I+G PNVGKSS++N L G V V+G TR + D + ++DT
Sbjct: 376 IAIVGRPNVGKSSILNAL-----VGEDRTIVSPVSGTTRDAIDTEFTTEDGQKYKLIDTA 430
Query: 205 GI 206
GI
Sbjct: 431 GI 432
>07_01_0075 - 558829-560859
Length = 676
Score = 34.3 bits (75), Expect = 0.14
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 114 QFCRGLKTIKPLMVDLIKNSNRYNRSEELEYN---VMIIGVPNVGKSSMINMLRSRNISG 170
+ C +K I P + L + R ++ N ++I G PNVGKSS +N + ++
Sbjct: 136 RMCTVIKRISPSLAYLEQIRQHMARLPSIDPNTRTLLICGYPNVGKSSFMNKITRADVD- 194
Query: 171 RHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPGILE 208
V A T+SL + ++DTPGIL+
Sbjct: 195 -----VQPYAFTTKSLFVGHADYKYLRYQVIDTPGILD 227
>06_01_0668 - 4882174-4884204
Length = 676
Score = 34.3 bits (75), Expect = 0.14
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 114 QFCRGLKTIKPLMVDLIKNSNRYNRSEELEYN---VMIIGVPNVGKSSMINMLRSRNISG 170
+ C +K I P + L + R ++ N ++I G PNVGKSS +N + ++
Sbjct: 136 RMCTVIKRISPSLAYLEQIRQHMARLPSIDPNTRTLLICGYPNVGKSSFMNKITRADVD- 194
Query: 171 RHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPGILE 208
V A T+SL + ++DTPGIL+
Sbjct: 195 -----VQPYAFTTKSLFVGHADYKYLRYQVIDTPGILD 227
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 33.9 bits (74), Expect = 0.18
Identities = 21/79 (26%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 131 KNSNRYNRSE-ELEY--NVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLM 187
K+S +Y+ ++ +L + N++++G VGKS++IN +I G + A G T ++
Sbjct: 4898 KSSQQYHDNQKDLSFSCNILVLGKIGVGKSTVIN-----SIMGEEKNKINAFDGATTNVR 4952
Query: 188 MKMRINNDPCIFMLDTPGI 206
+ + + + ++DTPG+
Sbjct: 4953 LVSSVVDGIKVNIIDTPGL 4971
>05_07_0147 -
28022018-28022104,28022207-28022287,28022513-28022614,
28022701-28022799,28023060-28023185,28023272-28023385,
28023478-28023618,28023717-28023862,28024011-28024386
Length = 423
Score = 33.1 bits (72), Expect = 0.32
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPG 205
V ++G PNVGKS++IN I G+ + V TR ++ + + I + DTPG
Sbjct: 128 VAVLGKPNVGKSTLIN-----QIVGQKLSIVTDKPQTTRHRILGICSEPEYQIILYDTPG 182
Query: 206 ILEPSVTNIE 215
+++ + ++
Sbjct: 183 VIKKEMHKLD 192
Score = 29.5 bits (63), Expect = 4.0
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 35 LKQMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAK---PHILVLNKRDLVITSLIP 91
+K ++ + S DCV+ V DA + I + P +LVLNK+DL+ I
Sbjct: 196 MKNVRSAVGSADCVLVVVDACKMPEKIDEILEEGVGNKDTELPVLLVLNKKDLIKPGEIA 255
Query: 92 RIKDQLKAEQNVDNVVFTNSKDQFCRGLKTIK 123
+ + + N D+V+ ++K F G+ IK
Sbjct: 256 KKLEWYQKFTNADDVIPISAK--FGHGVDDIK 285
>04_03_0687 +
18713603-18713962,18715318-18715539,18717068-18717256,
18717419-18717612,18718193-18718328
Length = 366
Score = 32.3 bits (70), Expect = 0.56
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 124 PLMVDLIKNSNRYNRSEELE-YNVMIIGVPNVGKSSMINMLRS-RNIS 169
PL + + + S E LE +I+G VGKSS+IN LRS +NIS
Sbjct: 136 PLFLSVDQKSGLSALEETLEGQTTVIVGPSGVGKSSLINALRSNQNIS 183
>03_02_0315 -
7401708-7401860,7401962-7402123,7402211-7402279,
7403332-7403596,7404613-7404737,7404826-7404933,
7405102-7405249,7406013-7406065
Length = 360
Score = 32.3 bits (70), Expect = 0.56
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPG 205
++++G VGKSS +N +I G V V A MM R + ++DTPG
Sbjct: 74 ILVMGKGGVGKSSTVN-----SIVGERVATVSAFQSEGLRPMMCSRTRAGFTLNIIDTPG 128
Query: 206 ILEPSVTNIEMGLKLALCAALQDHLVGEEIIADYLLY 242
++E N E +++ ++ L+G+ I D LLY
Sbjct: 129 LIEGGYIN-EQAVEI-----IKRFLLGKTI--DVLLY 157
>05_03_0671 +
16831185-16831254,16832017-16832084,16832318-16832394,
16832910-16833090,16833192-16833248,16834182-16834256,
16834820-16834939,16835018-16835224
Length = 284
Score = 31.9 bits (69), Expect = 0.74
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPG 205
V +IG P+VGKS+++ ML +G H + T + + + ND I +LD PG
Sbjct: 65 VALIGFPSVGKSTLLTML-----TGTH-SEAASYEFTTLTCIPGIIQYNDTKIQLLDLPG 118
Query: 206 ILE 208
I+E
Sbjct: 119 IIE 121
>08_01_0709 +
6265949-6266452,6267697-6267786,6268257-6268402,
6268534-6268710,6268774-6268840,6268949-6269056,
6269718-6269732
Length = 368
Score = 31.5 bits (68), Expect = 0.98
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 140 EELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIF 199
+++ +V I+G PN GKSS+ N + G V V T ++ + I
Sbjct: 145 DQMSLSVGIVGAPNAGKSSLTN-----TMVGTKVAAVSRKTNTTTHEILGVLTKGITQIC 199
Query: 200 MLDTPGIL 207
DTPG++
Sbjct: 200 FFDTPGLM 207
>03_05_0491 -
24868261-24869383,24869482-24869561,24870193-24870249,
24870567-24870660,24871013-24871099,24871188-24871347,
24871440-24871674
Length = 611
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPG 205
V +G PNVGKSS IN L + +G V + G T+ + I+ + + + D PG
Sbjct: 333 VGFVGYPNVGKSSTINALVGQKRTG-----VTSTPGKTKH-FQTLVISEE--LILCDCPG 384
Query: 206 ILEPSVTN 213
++ PS ++
Sbjct: 385 LVFPSFSS 392
>04_03_0240 -
13228046-13228170,13228247-13228307,13229301-13229368,
13229979-13230051,13230130-13230231,13231473-13231592,
13231795-13231913,13231990-13232047,13232152-13232208,
13232719-13232851,13233534-13233591,13234592-13234601,
13239996-13240961
Length = 649
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 241 LYWLNKHRKFKYVDFMGLDEPCDDINKVLLSGAIK 275
L WL K ++GLD PCD+ +K+L + A K
Sbjct: 152 LRWLWHEWKDPTKPWVGLDTPCDETDKLLFTAATK 186
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 176 VGAVAGVTRSLMMKMRINNDPCIFMLDTPGILEPSVTNIE------MGLKLALCAALQDH 229
V ++ G TR + + R+ +DPC ++ TPG L + N MGLKL L DH
Sbjct: 450 VQSLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIENKSSFSVRLMGLKL-LVLDEADH 508
Query: 230 LV 231
L+
Sbjct: 509 LL 510
>10_08_0015 +
14116129-14116691,14116810-14117128,14117588-14118664,
14118754-14119056
Length = 753
Score = 29.9 bits (64), Expect = 3.0
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Query: 213 NIEMGLKLALCAALQDHLVGEEIIADYLLYWLNKHRKFKYVDFMGLDEPCDDINKVLLSG 272
NI++ LK+ L++ E A +L +++ H K+ D L E + + SG
Sbjct: 628 NIKLSLKILFQETLKECRFSSEYYAQFLSFFMTSHMAPKF-DGTALTEGVAK-SGMTFSG 685
Query: 273 AIKYNRIRKVRDFDGKVRDVPDLLETSRHIIKAFRTGELGKVIL 316
+ K D GK VP LE + +R G+ V L
Sbjct: 686 LDGRDAASKWSDQGGKGERVPASLEVDDTSLPRWRGGDKAAVTL 729
>09_04_0344 + 16870922-16871035,16871200-16872054
Length = 322
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 248 RKFKYVDFMG--LDEPCDDINKVLLSGAIKYNRIRKVRDF-DGKVRDVPDLLETSRHIIK 304
R+ ++++F L E CDD+NK + + + VR + + D+PDL + R ++K
Sbjct: 64 REQRFLEFASKTLKEGCDDVNK---AEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMK 120
Query: 305 AF--RTGELGKVILDIDLLEN 323
F L + +LD+ L EN
Sbjct: 121 RFAAELETLAERLLDL-LCEN 140
>09_04_0343 - 16831789-16832643,16832782-16832826
Length = 299
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 248 RKFKYVDFMG--LDEPCDDINKVLLSGAIKYNRIRKVRDF-DGKVRDVPDLLETSRHIIK 304
R+ ++++F L E CDD+NK + + + VR + + D+PDL + R ++K
Sbjct: 41 REQRFLEFASKTLKEGCDDVNK---AEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMK 97
Query: 305 AF--RTGELGKVILDIDLLEN 323
F L + +LD+ L EN
Sbjct: 98 RFAAELETLAERLLDL-LCEN 117
>05_01_0372 - 2913518-2916562,2916674-2917528
Length = 1299
Score = 29.5 bits (63), Expect = 4.0
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 140 EELEY--NVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPC 197
EEL + N++++G VGKS+ IN +I G A + T S+ + +
Sbjct: 656 EELNFSCNILVLGKIGVGKSATIN-----SIFGEEKSKTDAFSSATNSVREIVGNVDGVQ 710
Query: 198 IFMLDTPGILEPSV 211
I ++DTPG L P+V
Sbjct: 711 IRIIDTPG-LRPNV 723
>04_04_0552 + 26195452-26195614,26195682-26195725,26198390-26199541
Length = 452
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 241 LYWLNKHRKFKYVDFMGLDEPCDDINKVLLSGAIK 275
L WL K ++GLD PCD+I+K L + + K
Sbjct: 137 LRWLWHEWKDPNKPWVGLDTPCDEIDKDLFAASTK 171
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 143 EYNVMIIGVPNVGKSSMINMLRSRNISGRHVLP 175
E++V+I+GV GK++++ ++S + G + P
Sbjct: 17 EFHVLILGVDKAGKTTLLEKIKSIYLKGEGLTP 49
>03_02_0473 +
8745721-8745994,8746083-8746090,8746232-8746324,
8746665-8746893,8747314-8747420,8747560-8747622,
8747883-8747983,8748996-8749090,8749330-8749350,
8749987-8750082,8750188-8750308,8750415-8750570,
8750679-8750869,8751207-8751478,8751853-8751954,
8752006-8752038,8752132-8752308,8752397-8752466,
8752512-8752585,8752667-8752908,8752983-8753129,
8753526-8753751,8753893-8753970,8754378-8754521,
8754829-8755008,8755335-8755394,8755484-8755523,
8758653-8759137
Length = 1294
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 89 LIPRIKDQLKAEQNVDNVVFTNSKDQFCRGLKTIKPLMVDLIKNSNRYNRSEELEYNVM 147
++PRI DQL AE D+V F R L +K L NS + E+ + ++
Sbjct: 183 VVPRIVDQLSAESTSDDVEF------HARRLAALKALTSSSTSNSEMLEKLYEIVFGIL 235
>07_03_0759 -
21299502-21299807,21299889-21300039,21300151-21300388,
21300729-21300939,21301018-21301133,21301388-21301519,
21302179-21303073
Length = 682
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 42 LKSVDCVIEVHDARIPFTGRNPIF----TSTLTGAKPHILVLNKRDLVITSLIPR 92
+ SV+ ++ + R+P R P F S + PH ++ D+ IT L+PR
Sbjct: 629 ISSVNIMLSSNTVRLPSLSR-PAFCIQDVSASDSSNPHSTAVSSNDMSITDLVPR 682
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 176 VGAVAGVTRSLMMKMRINNDPCIFMLDTPGILEPSVTN 213
V V G TR + + R++ +PC ++ TPG L+ + N
Sbjct: 563 VQLVIGGTRMALEQKRMHTNPCQILVATPGRLKDHMEN 600
>06_01_0102 +
834660-834911,835460-835568,835891-836006,836116-836235,
836398-836436,836678-836811,837035-837299,837615-837698,
837943-838003,838748-838810,839174-839216,839632-839711,
839831-840267
Length = 600
Score = 28.7 bits (61), Expect = 6.9
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 148 IIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMK-------MRINNDPCIFM 200
+IG VGKS+++N L + S +LP A M K +RI+N+ + +
Sbjct: 97 VIGPTGVGKSTIMNELYGYDGSSPGMLPPFATQTEEIKAMAKHCTAGIDIRISNER-VIL 155
Query: 201 LDTPGILEPSV 211
LDT + PSV
Sbjct: 156 LDTQPVFSPSV 166
>12_02_1133 -
26368323-26369457,26369556-26369635,26370145-26370201,
26370508-26370601,26371006-26371092,26371179-26371268,
26371396-26371649
Length = 598
Score = 28.3 bits (60), Expect = 9.2
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPG 205
V +G PNVGKSS IN L +G V G T+ + I+ + + + D PG
Sbjct: 316 VGFVGYPNVGKSSTINALVGEKKTG-----VTHTPGKTKH-FQTLIISEE--LTLCDCPG 367
Query: 206 ILEPSVTN 213
++ PS ++
Sbjct: 368 LVFPSFSS 375
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPG 205
V ++G N GKS+++N L ++ L + TR ++MK N + DT G
Sbjct: 256 VSLVGYTNAGKSTLLNRLTGADVLAEDKL-FATLDPTTRRVLMK----NGTEFLLTDTVG 310
Query: 206 ILEPSVTNIEMGLKLAL 222
++ T + + L
Sbjct: 311 FIQKLPTMLVAAFRATL 327
>02_04_0475 +
23229046-23229480,23230062-23231205,23232187-23232334,
23232776-23234225
Length = 1058
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 153 NVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINND 195
N K ++ +L S NI V+P+ G+ ++ + K+ N+D
Sbjct: 212 NKEKEEILALLESDNIENLLVIPIFGFGGIGKTTLAKLVFNDD 254
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.140 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,023,665
Number of Sequences: 37544
Number of extensions: 362222
Number of successful extensions: 859
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 822
Number of HSP's gapped (non-prelim): 44
length of query: 333
length of database: 14,793,348
effective HSP length: 82
effective length of query: 251
effective length of database: 11,714,740
effective search space: 2940399740
effective search space used: 2940399740
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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