GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000754-TA|BGIBMGA000754-PA|IPR005289|GTP-binding,
IPR002917|GTP-binding protein, HSR1-related
         (333 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       28   0.42 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.9  
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    23   9.1  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       23   9.1  

>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 27.9 bits (59), Expect = 0.42
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 4/79 (5%)

Query: 124 PLMVDLIKNSNRYNRSEELEYNVMIIGVP---NVGKSSMINMLRSRNISGRHVLPVGAVA 180
           P+MVD++ +   +   E +E +  IIG+P   NV    +I    S     + ++P    +
Sbjct: 265 PVMVDMMAHGGCFPYYESVELDARIIGIPYKHNVSTMYVIMPNNSNRAKLQQLIP-KLTS 323

Query: 181 GVTRSLMMKMRINNDPCIF 199
            V + L+  M I     +F
Sbjct: 324 EVVKDLIENMAIKTSIILF 342


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 127  VDLIKNSNRYNRSEELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSL 186
            +D IK+     + + L++   I     VGK   I    SRN   +H +  G V G   S 
Sbjct: 2892 MDKIKDMKMVLKEKNLKFITQI--KEKVGKMKQIGYHVSRNDVTQHAITTGKVVGRPEST 2949

Query: 187  MM 188
            ++
Sbjct: 2950 LI 2951


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)

Query: 293 PDLLETSRHIIKAFRTGELG 312
           PDLLE S + +K FRT + G
Sbjct: 251 PDLLELSVNQMKRFRTLDTG 270


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 30  HMNKGLKQMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAKP 74
           H+N G    +RK K  D    + DA +  TG     T  +   KP
Sbjct: 68  HVN-GFSDSERKQKIEDIKKNIRDAILTITGAMSTLTPPIQLEKP 111


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.140    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 326,518
Number of Sequences: 2123
Number of extensions: 12843
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 5
length of query: 333
length of database: 516,269
effective HSP length: 64
effective length of query: 269
effective length of database: 380,397
effective search space: 102326793
effective search space used: 102326793
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)