Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000754-TA|BGIBMGA000754-PA|IPR005289|GTP-binding,
IPR002917|GTP-binding protein, HSR1-related
(333 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g41670.1 68415.m05148 GTP-binding family protein contains Pfa... 126 2e-29
At4g02790.1 68417.m00379 GTP-binding family protein contains Pfa... 95 8e-20
At3g07050.1 68416.m00837 GTP-binding family protein contains Pfa... 71 8e-13
At1g52980.1 68414.m05995 GTP-binding family protein contains Pfa... 48 9e-06
At4g10650.1 68417.m01739 GTP-binding family protein contains Pfa... 45 6e-05
At5g39960.1 68418.m04846 GTP-binding family protein contains Pfa... 39 0.005
At3g57180.1 68416.m06366 expressed protein 38 0.012
At1g78010.1 68414.m09091 tRNA modification GTPase, putative simi... 37 0.016
At1g50920.1 68414.m05725 GTP-binding protein-related similar to ... 36 0.050
At5g18950.1 68418.m02251 pentatricopeptide (PPR) repeat-containi... 34 0.15
At5g66470.1 68418.m08382 expressed protein 33 0.20
At3g12080.1 68416.m01504 GTP-binding family protein contains Pfa... 33 0.20
At1g33930.1 68414.m04205 avirulence-responsive family protein / ... 33 0.20
At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ... 33 0.20
At1g10300.1 68414.m01160 GTP-binding protein-related contains si... 33 0.27
At4g15810.1 68417.m02406 chloroplast outer membrane protein, put... 33 0.35
At2g27200.1 68415.m03269 GTP-binding family protein contains Pfa... 32 0.47
At1g72660.1 68414.m08403 developmentally regulated GTP-binding p... 32 0.62
At1g33830.1 68414.m04187 avirulence-responsive family protein / ... 32 0.62
At1g17470.1 68414.m02143 developmentally regulated GTP-binding p... 32 0.62
At4g04695.1 68417.m00689 calcium-dependent protein kinase, putat... 31 1.1
At3g47450.2 68416.m05160 expressed protein 31 1.1
At3g47450.1 68416.m05159 expressed protein 31 1.1
At1g08410.1 68414.m00930 GTP-binding family protein contains Pfa... 31 1.1
At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical t... 31 1.1
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 31 1.4
At2g26820.1 68415.m03218 avirulence-responsive family protein / ... 31 1.4
At1g80770.1 68414.m09476 expressed protein 31 1.4
At4g04700.1 68417.m00690 calcium-dependent protein kinase, putat... 30 1.9
At1g33960.1 68414.m04209 avirulence-responsive protein / avirule... 30 1.9
At4g22756.1 68417.m03285 sterol desaturase family protein simila... 30 2.5
At5g57960.1 68418.m07252 GTP-binding family protein similar to S... 29 3.3
At5g18475.1 68418.m02177 pentatricopeptide (PPR) repeat-containi... 29 3.3
At1g67440.1 68414.m07676 expressed protein contains Pfam domain ... 29 3.3
At2g07750.1 68415.m01003 DEAD box RNA helicase, putative similar... 29 4.4
At1g33910.1 68414.m04203 avirulence-responsive family protein / ... 29 4.4
At3g16100.1 68416.m02034 Ras-related GTP-binding family protein ... 29 5.8
At1g63250.1 68414.m07150 DEAD box RNA helicase, putative similar... 29 5.8
At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putati... 29 5.8
At3g60190.1 68416.m06724 dynamin-like protein E (DL1E) nearly id... 28 7.6
At1g67460.1 68414.m07681 hypothetical protein contains Pfam doma... 28 7.6
At1g33970.1 68414.m04212 avirulence-responsive protein, putative... 28 7.6
At1g33870.1 68414.m04199 avirulence-responsive protein, putative... 28 7.6
At1g30580.1 68414.m03741 expressed protein 28 7.6
>At2g41670.1 68415.m05148 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 386
Score = 126 bits (305), Expect = 2e-29
Identities = 79/228 (34%), Positives = 127/228 (55%), Gaps = 16/228 (7%)
Query: 24 LRWFPGHMNKGLKQMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAKPHILVLNKRD 83
+ WFPGHM + ++ +LK D VIEV DARIP + N S ++ AK I+ LNK+D
Sbjct: 26 INWFPGHMAAATRAIRNRLKLSDLVIEVRDARIPLSSANEDLQSQMS-AKRRIIALNKKD 84
Query: 84 LVITSLIPRIKDQLKAEQNVDNVVFTNSKDQFCRGLKTIKPLMVDLIKNSNRYNRSEELE 143
L +++ + ++ + + +S+ + ++DL++ + + E
Sbjct: 85 LANPNVLNKWTRHFESSKQDCIAINAHSRSSVMK--------LLDLVELKLKEVIAREPT 136
Query: 144 YNVMIIGVPNVGKSSMINMLRSRNISGRHV------LPVGAVAGVTRSLMMKMRINNDPC 197
VM++GVPNVGKS++IN + + V VG + GVT+ + +I + P
Sbjct: 137 LLVMVVGVPNVGKSALINSIHQIAAARFPVQERLKRATVGPLPGVTQDIA-GFKIAHRPS 195
Query: 198 IFMLDTPGILEPSVTNIEMGLKLALCAALQDHLVGEEIIADYLLYWLN 245
I++LD+PG+L PS+ +IE GLKLAL +++D +VGEE IA Y L LN
Sbjct: 196 IYVLDSPGVLVPSIPDIETGLKLALSGSVKDSVVGEERIAQYFLAILN 243
>At4g02790.1 68417.m00379 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 372
Score = 94.7 bits (225), Expect = 8e-20
Identities = 72/203 (35%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 24 LRWFPGHMNKGLKQMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAKPHILVLNKRD 83
++W+PGH+ K K+++ +LK +D VIEV DARIP + +P + L G + ILVLN+ D
Sbjct: 96 VQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWL-GNRKRILVLNRED 154
Query: 84 LVITSLIPRIKDQLKAEQNVDNVVFTNSKDQFCRGLKTIKPLMVDLIKNSNRYNRSEEL- 142
+ I++ + A+Q + V+FTN K G + L L + N R + L
Sbjct: 155 M-ISNDDRNDWARYFAKQGI-KVIFTNGK--LGMGAMKLGRLAKSLAGDVNGKRREKGLL 210
Query: 143 --EYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFM 200
IIG PNVGKSS+IN L R I P GVTR M +++ D + +
Sbjct: 211 PRSVRAGIIGYPNVGKSSLINRLLKRKICAAAPRP-----GVTRE-MKWVKLGKD--LDL 262
Query: 201 LDTPGILEPSVTNIEMGLKLALC 223
LD+PG+L + + +KLA+C
Sbjct: 263 LDSPGMLPMRIDDQAAAIKLAIC 285
>At3g07050.1 68416.m00837 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 582
Score = 71.3 bits (167), Expect = 8e-13
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 26/210 (12%)
Query: 36 KQMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAKPH---ILVLNKRDLV------- 85
K++ + ++ D ++EV DAR P R + A P+ +L+LNK DLV
Sbjct: 128 KELVKVIELSDVILEVLDARDPLGTRCTDMERMVMQAGPNKHLVLLLNKIDLVPREAAEK 187
Query: 86 ----ITSLIPRIKDQLKAEQNVDNVVFTNSK-DQFCRGLKTIKPLMVD-LIKNSNRYNRS 139
+ P + + ++ N+ + +SK + L+T L D LIK Y+RS
Sbjct: 188 WLMYLREEFPAVAFKCSTQEQRSNLGWKSSKASKPSNMLQTSDCLGADTLIKLLKNYSRS 247
Query: 140 EELEYNVM--IIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPC 197
EL+ ++ IIG+PNVGKSS+IN L+ HV+ VGA G+TRSL ++ D
Sbjct: 248 HELKKSITVGIIGLPNVGKSSLINSLKR-----AHVVNVGATPGLTRSL---QEVHLDKN 299
Query: 198 IFMLDTPGILEPSVTNIEMGLKLALCAALQ 227
+ +LD PG++ + + + L C ++
Sbjct: 300 VKLLDCPGVVMLKSSGNDASIALRNCKRIE 329
>At1g52980.1 68414.m05995 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 576
Score = 48.0 bits (109), Expect = 9e-06
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Query: 37 QMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAKPH---ILVLNKRDLVITSLIPRI 93
++ + + S D +++V DAR P R TL H IL+LNK DLV
Sbjct: 208 ELYKVIDSSDVIVQVIDARDPQGTRCHHLEKTLKEHHKHKHMILLLNKCDLVPAWATKGW 267
Query: 94 KDQLKAEQNVDNVVFTNSKDQ-FCRGLKTIKPLMVDLIKNSNRYNRSEELEYNVMIIGVP 152
L E + F S ++ F +G ++ +++ R +S++ +V +G P
Sbjct: 268 LRVLSKEY--PTLAFHASVNKSFGKGS------LLSVLRQFARL-KSDKQAISVGFVGYP 318
Query: 153 NVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPGILEPS 210
NVGKSS+IN LR++N+ V P+ V + + + R IF++D PG++ S
Sbjct: 319 NVGKSSVINTLRTKNVC--KVAPIPGETKVWQYITLTKR------IFLIDCPGVVYQS 368
>At4g10650.1 68417.m01739 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 332
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/89 (25%), Positives = 42/89 (47%)
Query: 25 RWFPGHMNKGLKQMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAKPHILVLNKRDL 84
RW+ HM ++ + ++ VD V+E+ DARIP + + I+VLNK +L
Sbjct: 27 RWYGPHMAAAVRAISERIPLVDFVLEIRDARIPLSSEYELLRKFSPLPSKRIIVLNKMEL 86
Query: 85 VITSLIPRIKDQLKAEQNVDNVVFTNSKD 113
+ + D + + V +++KD
Sbjct: 87 ADPLELKKCIDYFEERNYLSYAVNSHNKD 115
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 190 MRINNDPCIFMLDTPGILEPSVTNIEMGLKLAL 222
++I + P +++LDTPGI P++ + E+ KLAL
Sbjct: 136 LQIGSHPNVYVLDTPGIFPPNLYDAEICAKLAL 168
>At5g39960.1 68418.m04846 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 616
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 128 DLIKNSNRYNRSEE--LEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRS 185
D++ + N + +E L + I+G PNVGKS+++N L + VL VG AG+TR
Sbjct: 295 DVLTDENLSDEIDESKLPLQLAIVGKPNVGKSTLLNAL----LEEERVL-VGPEAGLTRD 349
Query: 186 LMMKMRINNDPCIFMLDTPGILE 208
+ ++++DT G LE
Sbjct: 350 AVRVQFEFQGRTVYLVDTAGWLE 372
>At3g57180.1 68416.m06366 expressed protein
Length = 644
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 145 NVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTP 204
NV +IG N GKS++IN L ++ + L V G T ++ I + M DTP
Sbjct: 378 NVWVIGAQNAGKSTLINALSKKDGAKVTRLTEAPVPGTTLGILKIGGILSAKA-KMYDTP 436
Query: 205 GILEPSVTNIEM 216
G+L P + ++ +
Sbjct: 437 GLLHPYLMSLRL 448
>At1g78010.1 68414.m09091 tRNA modification GTPase, putative similar
to tRNA modification GTPase trmE [strain PCC 7120,
Anabaena sp.] SWISS-PROT:Q8YN91
Length = 560
Score = 37.1 bits (82), Expect = 0.016
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 127 VDLIKNSNRYNRSEELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSL 186
V+ ++ Y++ + + I+G PNVGKSS++N + + S R + V VAG TR +
Sbjct: 301 VESALDTANYDKLLQSGLQIAIVGRPNVGKSSLLN---AWSKSERAI--VTEVAGTTRDV 355
Query: 187 M-MKMRINNDPCIFMLDTPGILEPSVTNIEMGLKLALCAA 225
+ + + P I +LDT GI E + ++G++ + AA
Sbjct: 356 VEANVTVRGVP-ITLLDTAGIRETNDIVEKIGVERSETAA 394
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 34 GLKQMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAKPHILVLNKRDLVITSLIPRI 93
G+++ + K D +I A +T + + KP ILV+NK D ++
Sbjct: 386 GVERSETAAKVADVIIMAVSAVEGWTEEDTELLRKIQSDKPMILVMNKIDCAPPGSCDQL 445
Query: 94 KDQLKAEQNVDNVVFTNS 111
+DQ K E+ VFT++
Sbjct: 446 EDQRKKEEVFHKSVFTSA 463
>At1g50920.1 68414.m05725 GTP-binding protein-related similar to
GTP-binding protein SP:Q99ME9 from [Mus musculus]
Length = 671
Score = 35.5 bits (78), Expect = 0.050
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 114 QFCRGLKTIKPLMVDLIKNSNRYNRSEELEYN---VMIIGVPNVGKSSMINMLRSRNISG 170
+ C LK I P + L + R ++ N V+I G PNVGKSS +N + ++
Sbjct: 136 RMCTVLKRITPSLAYLEQIRQHMARLPSIDPNTRTVLICGYPNVGKSSFMNKVTRADVD- 194
Query: 171 RHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPGILE 208
V A T+SL + ++DTPGIL+
Sbjct: 195 -----VQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILD 227
>At5g18950.1 68418.m02251 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 483
Score = 33.9 bits (74), Expect = 0.15
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 77 LVLNKRDLVITSLIPRIKDQLKAEQNVDNVVFTNSKDQFC-RG-LKTIKPLMVDLIKNSN 134
L +NK+ L + +KD+ A D VV+T FC +G L + + L ++IK
Sbjct: 293 LCMNKKQLEAYCIFKNLKDKGYAP---DRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGM 349
Query: 135 RYNRSEELEYNVMIIGVPNVGKSSMI 160
R N E YNVMI G G+ S++
Sbjct: 350 RPN---EFAYNVMIHGHFKRGEISLV 372
>At5g66470.1 68418.m08382 expressed protein
Length = 427
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPG 205
V ++G+PNVGKS++ N + + IS V TR ++ + + + + + DTPG
Sbjct: 132 VAVVGMPNVGKSTLSNQMIGQKIS-----IVTDKPQTTRHRILGICSSPEYQMILYDTPG 186
Query: 206 ILEPSVTNIE 215
++E + ++
Sbjct: 187 VIEKKMHRLD 196
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 35 LKQMQRKLKSVDCVIEVHDARIPFTGRNPIFTSTLTGAK---PHILVLNKRDLVITSLIP 91
+K ++ + DCV+ + DA T + L + P +LV+NK+DL+ I
Sbjct: 200 MKNVRDAAINADCVVILVDACKTPTNIEEVLKEGLGDLEKKPPMLLVMNKKDLIKPGEIA 259
Query: 92 RIKDQLKAEQNVDNVVFTNSKDQFCRGLKTIK 123
+ + + +VD V+ ++K + G++ +K
Sbjct: 260 KKLEWYEKFTDVDEVIPVSAK--YGHGIEDVK 289
>At3g12080.1 68416.m01504 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 663
Score = 33.5 bits (73), Expect = 0.20
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 129 LIKNSNRYNRSEELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMM 188
L KN+ + E L V I+G PNVGKS++ N L N R + V GVTR +
Sbjct: 146 LAKNTQQI--PEHLLQRVAIVGRPNVGKSALFNRLVGEN---RAI--VVDEPGVTRDRLY 198
Query: 189 KMRINNDPCIFMLDTPGILEPS 210
D ++DT G++ S
Sbjct: 199 GRSYWGDQEFVVVDTGGVMTVS 220
Score = 33.1 bits (72), Expect = 0.27
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Query: 129 LIKNSNRYNRSEELEYN----VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTR 184
LIK N EE E N + IIG PNVGKSS++N L + R + V V+G TR
Sbjct: 350 LIKLEIMENIEEEEEENYIPAIAIIGRPNVGKSSILNALVRED---RTI--VSPVSGTTR 404
Query: 185 SLMMKMRINNDPCIF-MLDTPGILEPS 210
+ D F ++DT GI + S
Sbjct: 405 DAIDAEFTGPDGEKFRLIDTAGIRKKS 431
>At1g33930.1 68414.m04205 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains
Pfam profile PF04548: AIG1 family
Length = 336
Score = 33.5 bits (73), Expect = 0.20
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 124 PLMVDLIKNSNRYN--RSEELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAG 181
P + +KN +R+ + E NV+++G GKS+ N + R + VG
Sbjct: 14 PSASEPVKNVDRWELPSASEPVKNVVLVGRTGNGKSATGNSIIGRKVFESKYQAVGVT-- 71
Query: 182 VTRSLMMKMRINNDPCIFMLDTPGILEPSVTNIEMGLKLALCAAL 226
TR + + P I ++DTPG+ + +V+ + ++ C L
Sbjct: 72 -TRCKTFRAVTPDGPIINVIDTPGLFDLAVSAEFISKEIVNCLIL 115
>At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to
GTP-binding protein ERG SP:O82653 from [Arabidopsis
thaliana]
Length = 437
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 140 EELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIF 199
++ NV IIG PN GKSS+ N + G V T ++ + D +
Sbjct: 150 DQKSLNVGIIGPPNAGKSSLTNFM-----VGTKVAAASRKTNTTTHEVLGVLTKGDTQVC 204
Query: 200 MLDTPGIL 207
DTPG++
Sbjct: 205 FFDTPGLM 212
>At1g10300.1 68414.m01160 GTP-binding protein-related contains
similarity to nucleolar GTP-binding protein 1 SP: Q9BZE4
from [Homo sapiens];
Length = 687
Score = 33.1 bits (72), Expect = 0.27
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 114 QFCRGLKTIKPLMVDLIKNSNRYNRSEELEYN---VMIIGVPNVGKSSMINMLRSRNISG 170
+ C +K I P + L + R ++ N ++I G PNVGKSS +N + +++
Sbjct: 165 RMCTVMKGIGPSLAYLEQVRQHIARLPSIDPNTRTLLICGCPNVGKSSFMNKVTRADVA- 223
Query: 171 RHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPGILEPSV 211
V A T+SL + ++DTPG+L+ +
Sbjct: 224 -----VQPYAFTTKSLFLGHTDYKCLRYQVIDTPGLLDREI 259
>At4g15810.1 68417.m02406 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 898
Score = 32.7 bits (71), Expect = 0.35
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 141 ELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFM 200
+ NV++IG VGKS+ +N +I G VGA T S + I +
Sbjct: 607 DFSINVLVIGKTGVGKSATVN-----SIFGETKSAVGAFGVTTNSANYVVGNVGGIQISI 661
Query: 201 LDTPGILEPSVTNIEMGLKLALCAAL 226
LDTPG+L S T + ++ + L
Sbjct: 662 LDTPGLLS-SATEEQFNQEVLIARCL 686
>At2g27200.1 68415.m03269 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 537
Score = 32.3 bits (70), Expect = 0.47
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPG 205
V +G PNVGKSS IN L + +G V + G T+ + I+ D + + D PG
Sbjct: 307 VGFVGYPNVGKSSTINALVGQKRTG-----VTSTPGKTKH-FQTLIISED--LMLCDCPG 358
Query: 206 ILEPSVTN 213
++ PS ++
Sbjct: 359 LVFPSFSS 366
>At1g72660.1 68414.m08403 developmentally regulated GTP-binding
protein, putative very strong similarity to
developmentally regulated GTP binding protein (DRG1)
[Arabidopsis thaliana] GI:2345150
Length = 399
Score = 31.9 bits (69), Expect = 0.62
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPG 205
V +IG P+VGKS+++ ML +G H + T + + + ND I +LD PG
Sbjct: 65 VALIGFPSVGKSTLLTML-----TGTH-SEAASYEFTTLTCIPGVIHYNDTKIQLLDLPG 118
Query: 206 ILE 208
I+E
Sbjct: 119 IIE 121
>At1g33830.1 68414.m04187 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana); contains
Pfam profile: PF00735 cell division protein (members of
this family bind GTP)
Length = 225
Score = 31.9 bits (69), Expect = 0.62
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 145 NVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVT--RSLMMKMRINNDPCIFMLD 202
N++++G GKSS N I G V R M + I + P I ++D
Sbjct: 10 NLLLLGRSENGKSSTGN-----TIIGEKYFEVNLFGRDMDQRCKMFRALIEDGPIINVID 64
Query: 203 TPGILEPSVTNIEMGLKLALCAALQD 228
TPG+LE SV+ + ++ C + +
Sbjct: 65 TPGLLESSVSGDYLSKEIMNCLTMAE 90
>At1g17470.1 68414.m02143 developmentally regulated GTP-binding
protein (DRG1) identical to developmentally regulated
GTP binding protein (DRG1) [Arabidopsis thaliana]
GI:2345150
Length = 399
Score = 31.9 bits (69), Expect = 0.62
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPG 205
V +IG P+VGKS+++ ML +G H + T + + + ND I +LD PG
Sbjct: 65 VALIGFPSVGKSTLLTML-----TGTH-SEAASYEFTTLTCIPGVIHYNDTKIQLLDLPG 118
Query: 206 ILE 208
I+E
Sbjct: 119 IIE 121
>At4g04695.1 68417.m00689 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Lycopersicon esculentum]
gi|19171502|emb|CAC87494; contains protein kinase
domain, Pfam:PF00069; contains EF hand domain
(calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 484
Score = 31.1 bits (67), Expect = 1.1
Identities = 31/153 (20%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Query: 83 DLVITSLIPRIKDQLKAEQNVDNVVFTNSKDQFCRGLKTIKPLMVDLIKNSNRYNRSEEL 142
D V+ S + + +D K ++ V+ N ++ +GLKT L ++ + + EEL
Sbjct: 301 DGVVLSRLKQFRDMNKLKKVALKVIAANLSEEEIKGLKT---LFTNIDTDKSGTITLEEL 357
Query: 143 EYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLD 202
+ + +G N+ K+ + ++ + ++ G + + T M + R++ D ++
Sbjct: 358 KTGLTRLG-SNLSKTEVEQLMEAADVDGNGTIDIDEFISAT---MHRYRLDRDDHVYQ-- 411
Query: 203 TPGILEPSVTNIEMGLKLALCAALQDHLVGEEI 235
N K L A+++H VG+E+
Sbjct: 412 --AFQHFDKDNDGHITKEELEMAMKEHGVGDEV 442
>At3g47450.2 68416.m05160 expressed protein
Length = 561
Score = 31.1 bits (67), Expect = 1.1
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 56 IPFTGRNPIFTSTLTGAKPHILVLNKRDLVITSLIPRIKDQLKAEQNVDNVVFTNSKDQF 115
+ F G L GA P ILV+ K DL +P+ D V V +
Sbjct: 199 VDFNGSFLARVRDLVGANPIILVITKIDL-----LPKGTDMNCIGDWVVEVTMRKKLNVL 253
Query: 116 CRGLKTIKPLMVDLIKNSNRYNRSEELEYNVMIIGVPNVGKSSMINML 163
L + K L D + + E+ +V I+G NVGKS+ IN L
Sbjct: 254 SVHLTSSKSL--DGVSGVASEIQKEKKGRDVYILGAANVGKSAFINAL 299
>At3g47450.1 68416.m05159 expressed protein
Length = 561
Score = 31.1 bits (67), Expect = 1.1
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 56 IPFTGRNPIFTSTLTGAKPHILVLNKRDLVITSLIPRIKDQLKAEQNVDNVVFTNSKDQF 115
+ F G L GA P ILV+ K DL +P+ D V V +
Sbjct: 199 VDFNGSFLARVRDLVGANPIILVITKIDL-----LPKGTDMNCIGDWVVEVTMRKKLNVL 253
Query: 116 CRGLKTIKPLMVDLIKNSNRYNRSEELEYNVMIIGVPNVGKSSMINML 163
L + K L D + + E+ +V I+G NVGKS+ IN L
Sbjct: 254 SVHLTSSKSL--DGVSGVASEIQKEKKGRDVYILGAANVGKSAFINAL 299
>At1g08410.1 68414.m00930 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 589
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPG 205
V +G PNVGKSS IN L + +G V + G T+ + I+++ + + D PG
Sbjct: 311 VGFVGYPNVGKSSTINALVGQKRTG-----VTSTPGKTKH-FQTLIISDE--LMLCDCPG 362
Query: 206 ILEPSVTN 213
++ PS ++
Sbjct: 363 LVFPSFSS 370
>At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical to
atToc33 protein (GI:11557973) [Arabidopsis thaliana];
Carboxyl-terminal end highly similar to GTP-binding
protein SP:U43377, location of EST gb|AA394770 and
gb|R30089; identical to cDNA for chloroplast atToc33
protein GI:11557972
Length = 297
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 129 LIKNSNRYNRSEELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMM 188
LI+ + + + V+++G VGKSS +N ++ G V+ V +M
Sbjct: 22 LIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVN-----SLIGEQVVRVSPFQAEGLRPVM 76
Query: 189 KMRINNDPCIFMLDTPGILEPSVTN 213
R I ++DTPG++E N
Sbjct: 77 VSRTMGGFTINIIDTPGLVEAGYVN 101
>At4g02510.1 68417.m00343 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1503
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 139 SEELEY--NVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDP 196
+EEL + N++++G VGKS+ IN +I G + + A T S+ N
Sbjct: 849 NEELIFSLNILVLGKAGVGKSATIN-----SILGNQIASIDAFGLSTTSVREISGTVNGV 903
Query: 197 CIFMLDTPGI 206
I +DTPG+
Sbjct: 904 KITFIDTPGL 913
>At2g26820.1 68415.m03218 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains
Pfam profile PF04548: AIG1 family
Length = 463
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 145 NVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSL-MMKMRINNDPCIFMLDT 203
N++++G GKSS N L + + GVT M + I + P I ++DT
Sbjct: 7 NIVLVGRTGNGKSSTGNTL----LGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVIDT 62
Query: 204 PGILEPSVTNIEMGLKLALCAALQD 228
PG+ + V ++ ++ C + +
Sbjct: 63 PGLCDSFVPGDDISNEIINCLTMAE 87
>At1g80770.1 68414.m09476 expressed protein
Length = 451
Score = 30.7 bits (66), Expect = 1.4
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 148 IIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPGIL 207
++G PNVGKSS++ +L +G+ + TR ++M + N + DTPG+L
Sbjct: 258 LVGAPNVGKSSLVRILS----TGKP--EICNYPFTTRGILMGHIVLNYQRFQVTDTPGLL 311
Query: 208 ---EPSVTNIEMGLKLAL-----CAALQDH-LVGEEIIADYLLYWLNKHRKFKYVDFMGL 258
+ N+E L LA+ A L H L GE + + + K K ++ D++ +
Sbjct: 312 RRCDEDRNNLEK-LTLAVLTHLPTAVLYVHDLTGECGTSPSDQFQIYKEMKERFKDYLWI 370
Query: 259 D--EPCD 263
D CD
Sbjct: 371 DAVSKCD 377
>At4g04700.1 68417.m00690 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Nicotiana tabacum] gi|3283996|gb|AAC25423;
contains protein kinase domain, Pfam:PF00069
Length = 485
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/117 (21%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 83 DLVITSLIPRIKDQLKAEQNVDNVVFTNSKDQFCRGLKTIKPLMVDLIKNSNRYNRSEEL 142
D V+ S + R +D K ++ V + N ++ +GLKT+ +D K+ N EEL
Sbjct: 301 DGVVLSRLKRFRDANKFKKVVLKFIAANLSEEEIKGLKTLF-TNIDTDKSGN--ITLEEL 357
Query: 143 EYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIF 199
+ + +G N+ K+ + ++ + ++ G + + T M + +++ D ++
Sbjct: 358 KTGLTRLG-SNLSKTEVEQLMEAADMDGNGTIDIDEFISAT---MHRYKLDRDEHVY 410
>At1g33960.1 68414.m04209 avirulence-responsive protein / avirulence
induced gene (AIG1) identical to AIG1 (exhibits RPS2-
and avrRpt2-dependent induction early after infection
with Pseudomonas) SP:U40856 [Arabidopsis thaliana]
(Plant Cell 8 (2), 241-249 (1996))
Length = 353
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 145 NVMIIGVPNVGKSSMIN-MLRSRNISGRHVLPVGAVAGVTRSL-MMKMRINNDPCIFMLD 202
N++++G GKS+ N ++RS+ + +GVT +K P + ++D
Sbjct: 44 NIVLVGRTGNGKSATGNSIVRSKVFKSKT-----KSSGVTMECHAVKAVTPEGPILNVID 98
Query: 203 TPGILEPSVTNIEMGLKLALCAALQD 228
TPG+ + SV+ +G ++ C L D
Sbjct: 99 TPGLFDLSVSAEFIGKEIVKCLTLAD 124
>At4g22756.1 68417.m03285 sterol desaturase family protein similar
to sterol 4-alpha-methyl-oxidase GI:16973471 from
[Arabidopsis thaliana]; contains Pfam profile PF01598:
Sterol desaturase
Length = 299
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 209 PSVTNIEM--GLKLALCAALQDHLVGEEIIADYLLYWLNK--HRKFKYVDF 255
PS+ IE+ GL L C + LV ++ DY YW+++ H K+ Y F
Sbjct: 109 PSIQMIEIRSGLPLPSCMEIVAQLVVYFLVEDYTNYWVHRFFHCKWGYEKF 159
>At5g57960.1 68418.m07252 GTP-binding family protein similar to
SP|P25519 GTP-binding protein hflX {Escherichia coli}
Length = 540
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPG 205
V ++G N GKS+++N L N+ + L + TR + M+ N + DT G
Sbjct: 312 VSLVGYTNAGKSTLLNQLTGANVLAENRL-FATLDPTTRRVQMQ----NGKEFLLTDTVG 366
Query: 206 ILEPSVTNIEMGLKLAL 222
++ T + + L
Sbjct: 367 FIQKLPTTLVAAFRATL 383
>At5g18475.1 68418.m02177 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 506
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 98 KAEQNVDNVVFTNSKDQFCRGLKTIKPLMVDLIKNSNRYNRSEELEYNVMIIGVPNVGKS 157
K +D V +T + FCR +T + + + ++R R++ L YNV++ G+ + G+S
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC-RADTLTYNVILRGLSSEGRS 389
Query: 158 -SMINMLRSRNISGRHV 173
+ ML G H+
Sbjct: 390 EEALQMLDQWGSEGVHL 406
>At1g67440.1 68414.m07676 expressed protein contains Pfam domain
PF03193: Protein of unknown function, DUF258
Length = 433
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 147 MIIGVPNVGKSSMINMLRSRNISG 170
+I+G VGKSS+IN+LRS + G
Sbjct: 209 VIVGPSGVGKSSLINVLRSNHGGG 232
>At2g07750.1 68415.m01003 DEAD box RNA helicase, putative similar to
RNA helicase RH25 [Arabidopsis thaliana] GI:3776023;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain
Length = 845
Score = 29.1 bits (62), Expect = 4.4
Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 5/150 (3%)
Query: 92 RIKDQLKAEQNVDNVVFTNSKDQFCRGLKTIKPLMVDLIKNSNRYNRSEELEYNVMIIGV 151
R++D +E +K + + + P + ++K N ++ ++I
Sbjct: 400 RVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVHKVAPIFVLILC 459
Query: 152 PNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTPGILEPSV 211
P +S I + + V + G TR + + R+ ++PC ++ TPG L +
Sbjct: 460 PTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHI 519
Query: 212 TNIEMGLKLALCAALQDHLVGEEIIADYLL 241
N + GL L AL+ +V E AD LL
Sbjct: 520 EN-KSGLTSRL-MALKLFIVDE---ADLLL 544
>At1g33910.1 68414.m04203 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains
Pfam profile PF04548: AIG1 family
Length = 301
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 145 NVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRINNDPCIFMLDTP 204
N++++G GKSS N L G+ V + V T K + + I ++DTP
Sbjct: 15 NIVLVGPTGNGKSSTGNSL-----IGKEVFILETVECKT----CKAKTLDGQIINVIDTP 65
Query: 205 GILEPSVTNIEMGLKLALCAALQD 228
G+ + SV+ M ++ C L D
Sbjct: 66 GLFDLSVSTDYMNKEIINCLTLTD 89
>At3g16100.1 68416.m02034 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGA 178
V+I+G VGK+S++N +R S ++ +GA
Sbjct: 11 VIILGDSGVGKTSLMNQFVNRKFSNQYKATIGA 43
>At1g63250.1 68414.m07150 DEAD box RNA helicase, putative similar to
RNA helicase (RH25) [Arabidopsis thaliana] GI:3776023;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain
Length = 798
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 176 VGAVAGVTRSLMMKMRINNDPCIFMLDTPGILEPSVTNIEMGLKLALCAALQDHLVGEEI 235
V + G TR + + R+ ++PC ++ TPG L + N + GL L AL+ +V E
Sbjct: 437 VQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIEN-KSGLTSRL-MALKLFIVDE-- 492
Query: 236 IADYLL 241
AD LL
Sbjct: 493 -ADLLL 497
>At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putative
similar to RAB7D GI:1370187 from [Lotus japonicus]
(Plant J. 11 (2), 237-250 (1997)); contains Pfam
PF00071: Ras family
Length = 206
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 146 VMIIGVPNVGKSSMINMLRSRNISGRHVLPVGA 178
V+I+G VGK+S++N +R S ++ +GA
Sbjct: 11 VIILGDSGVGKTSLMNQFVNRKFSNQYKATIGA 43
>At3g60190.1 68416.m06724 dynamin-like protein E (DL1E) nearly
identical to dynamin-like protein E [Arabidopsis
thaliana] GI:19423872; contains Pfam profiles PF01031:
Dynamin central region, PF00350: Dynamin family,
PF02212: Dynamin GTPase effector domain
Length = 624
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 133 SNRYNRSEELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLMMKMRI 192
SN +N E V ++G + GKSS++ +I GR LP G+ R L++++
Sbjct: 30 SNAFNSLWEALPTVAVVGGQSSGKSSVL-----ESIVGRDFLPRGSGIVTRRPLVLQLHK 84
Query: 193 NND 195
+D
Sbjct: 85 TDD 87
>At1g67460.1 68414.m07681 hypothetical protein contains Pfam domain
PF03193: Protein of unknown function, DUF258
Length = 434
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 147 MIIGVPNVGKSSMINMLRS 165
+I+G VGKSS+IN+LRS
Sbjct: 252 VIVGPSGVGKSSLINILRS 270
>At1g33970.1 68414.m04212 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 342
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 128 DLIKNSNRYNRSEELEYNVMIIGVPNVGKSSMINMLRSRNISGRHVLPVGAVAGVTRSLM 187
D++++ + S + ++++G GKS+ N + R VG VT +
Sbjct: 9 DMMEDDWEFASSSNPKRTLVLVGRTGNGKSATGNSILGRKAFRSRARTVG----VTSTCE 64
Query: 188 MKMRINNDPCIF-MLDTPGILEPSVTNIEMGLKLALCAALQD 228
+ + D I ++DTPG+ + S +G ++ C +L +
Sbjct: 65 SQRVVQEDGDIINVVDTPGLFDLSTAADFIGKEIVRCISLAE 106
>At1g33870.1 68414.m04199 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 252
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 181 GVTRSLMM-KMRINNDPCIFMLDTPGILEPSVTNIEMGLKLALCAALQD 228
GVT +M + I + P I ++DTPG+ + SV+ + ++ C + +
Sbjct: 10 GVTMECVMYRTAIKDGPIINVIDTPGLFDSSVSANYITTEILKCLTMAE 58
>At1g30580.1 68414.m03741 expressed protein
Length = 394
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 148 IIGVPNVGKSSMINMLRSRNI 168
I+G+PNVGKS++ N L +I
Sbjct: 29 IVGLPNVGKSTLFNTLTKLSI 49
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.140 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,584,040
Number of Sequences: 28952
Number of extensions: 314627
Number of successful extensions: 891
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 852
Number of HSP's gapped (non-prelim): 53
length of query: 333
length of database: 12,070,560
effective HSP length: 81
effective length of query: 252
effective length of database: 9,725,448
effective search space: 2450812896
effective search space used: 2450812896
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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