Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000753-TA|BGIBMGA000753-PA|IPR008616|Fibronectin-binding
A, N-terminal, IPR008532|Protein of unknown function DUF814
         (992 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    24   5.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   7.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   7.0  

>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 681 TIAEEPRAADPPDVRASETAIQNERDGDTESDSGDDLPDTHI 722
           +I+EE +  D       E ++Q  +  ++ S S D LP  H+
Sbjct: 430 SISEEQKFDDEAHWELEEESLQGSKIKESNSCSNDQLPMGHM 471


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 282 HENLPFAEYETFDRAVDEFFSASEGQKID 310
           H+N P   YET  RA+  ++      K+D
Sbjct: 503 HKNKPDMNYETMGRALRYYYQRGILAKVD 531


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)

Query: 936 TSKRGKAAKTAIQVFLKEPTGTPR 959
           T K  K  K A+   L  P GTPR
Sbjct: 319 TYKYSKRYKMAVAFMLSHPFGTPR 342


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.132    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,899
Number of Sequences: 429
Number of extensions: 10857
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 3
length of query: 992
length of database: 140,377
effective HSP length: 64
effective length of query: 928
effective length of database: 112,921
effective search space: 104790688
effective search space used: 104790688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)