BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000752-TA|BGIBMGA000752-PA|IPR008949|Terpenoid synthase (377 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase s... 71 4e-13 SPAC19G12.12 |dlp1||decaprenyl diphosphate synthase subunit 2 Dl... 56 8e-09 SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 28 2.5 SPBC30B4.05 |kap109||karyopherin Kap109|Schizosaccharomyces pomb... 28 2.5 SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 27 3.3 SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 27 3.3 SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 27 4.3 SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 27 4.3 SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 26 7.6 >SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase subunit Dps1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 378 Score = 70.5 bits (165), Expect = 4e-13 Identities = 86/356 (24%), Positives = 155/356 (43%), Gaps = 38/356 (10%) Query: 18 WSKLIREAEKIVGYPTSFMNLRWLLSDEFANLAMHLRKVVGSNHPIVKTAKNFLYNEHNN 77 WS L + ++ + T+ N L+ +E ++ +R+++ SN ++ + Y Sbjct: 14 WS-LGKVRSTVLRFSTTNRNASHLIKNELEQISPGIRQMLNSNSEFLEECSKY-YTIAQG 71 Query: 78 LQPWGLIILLLSKAVS-----------------PETSSLQNSALAQDQRILAELTEMIRT 120 Q ++LL+SKA S + S + Q LA++TEMI Sbjct: 72 KQMRPSLVLLMSKATSLCHGIDRSVVGDKYIDDDDLRSFSTGQILPSQLRLAQITEMIHI 131 Query: 121 GHYVHRGLLNIAPDDRDSSMATSMFANKIAILIGDYLLVTANGMLARLKNQDLSYLISTA 180 +H +++ A R S + F N+ +IL G+++L A+ +ARL+N ++ L++T Sbjct: 132 ASLLHDDVIDHANVRRGSPSSNVAFGNRRSILAGNFILARASTAMARLRNPQVTELLATV 191 Query: 181 LRDLSEGEFFGERDNQNIPIPGKPVPFETGEFDICSDTTPLKVNNILGEPIREWTLRTMF 240 + DL GEF ++ + P + + FD + + LK +++ + + Sbjct: 192 IADLVRGEFLQLKNTMD---PSS-LEIKQSNFDYYIEKSFLKTASLISKSCK-------- 239 Query: 241 NGGTLLGRGCQGALLLSGKGEKEQEIAYKFGCY-LCLAWQASAEIQKITSDNKEHYSLVS 299 T+LG+ C + + GE + I F L + + + + L + Sbjct: 240 -ASTILGQ-C-SPTVATAAGEYGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLAT 296 Query: 300 APVLFALHENPKLYHGLENA-KSVSDIDLDKLKVEILRTNAIEQTRSLYSENANKA 354 APVLFA + P+L + N SDI + VE T+AIEQT + E KA Sbjct: 297 APVLFAWKKYPELGAMIVNRFNHPSDIQRARSLVEC--TDAIEQTITWAKEYIKKA 350 >SPAC19G12.12 |dlp1||decaprenyl diphosphate synthase subunit 2 Dlp1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 294 Score = 56.0 bits (129), Expect = 8e-09 Identities = 48/183 (26%), Positives = 95/183 (51%), Gaps = 18/183 (9%) Query: 18 WSKLIREAEKIVGYPTSF-MNLRWLLSDEFANLAMHLRKVVGSNHPIVKTAKNFLYNEHN 76 WS ++ +A ++ + + +L +L++E +L + +N + + K + + Sbjct: 27 WSSILLKAVGVLSRDSRWHSDLLKMLTEEMDSLNGQINTWTDNNPLLDEITKPYRKSSTR 86 Query: 77 NLQPWGLIILLLSKA-VSPETSSLQNSALAQDQRILAELTEMIRTGHYVHRGLLNIAPDD 135 P L++LL+S+A V+ + S Q L Q + LA +TE+I + +H +NI + Sbjct: 87 FFHP--LLVLLMSRASVNGDPPSQQ---LFQRYKQLARVTELIHAANIIH---INIGEEQ 138 Query: 136 RDSSMATSMFANKIAILIGDYLLVTANGMLARLKNQDLSYLISTALRDLSEGEFFGERDN 195 + + K+A L+GDYLL A+ LA L+N ++ ++++ + +L EG FG R N Sbjct: 139 SNEQI-------KLATLVGDYLLGKASVDLAHLENNAITEIMASVIANLVEGH-FGSRQN 190 Query: 196 QNI 198 ++ Sbjct: 191 GSV 193 >SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 668 Score = 27.9 bits (59), Expect = 2.5 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Query: 5 TQEDFVFKPPLTHWSKLIREAEKIVGYPTSFMNLRWLLSDEF 46 +++ F K P ++W K E +V P + LRW +S E+ Sbjct: 7 SKKSFCIKAP-SNWEKSYLEVWPLVTVPRQCICLRWCISKEY 47 >SPBC30B4.05 |kap109||karyopherin Kap109|Schizosaccharomyces pombe|chr 2|||Manual Length = 967 Score = 27.9 bits (59), Expect = 2.5 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Query: 49 LAMHLRKVVGSNHPIVKTAKNFLYNEHNNLQPWGLIILLLSKAVSPETSSLQNSALAQDQ 108 L HL K+ + K N +N H + G +I LSK+ S L+N+ L Q Sbjct: 588 LLQHLTKIT---EEVSKNPSNPKFN-HYLFESIGALIRSLSKSGPQTVSQLENALLPVFQ 643 Query: 109 RILAE-LTEMI 118 +L E +TE I Sbjct: 644 NVLIEDVTEFI 654 >SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1427 Score = 27.5 bits (58), Expect = 3.3 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 316 LENAKSVSDIDLDKLKVEIL--RTNAIEQTRSLYSENANKALNYIEMFGDCESVDTIK 371 + A V ID++ L +E+L R + I Q L S L+ E +GD E + +K Sbjct: 1234 MSGAVEVDGIDINSLDLEVLRQRISLIPQDPVLISGTVRSNLDPFEEYGDGELNEILK 1291 >SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 750 Score = 27.5 bits (58), Expect = 3.3 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 2/87 (2%) Query: 290 DNKEH-YSLVSAPVLFALHENPKLYHGLENAKSVSDIDLDKLKVEILRTNA-IEQTRSLY 347 +N EH Y + + V HE L EN K + ++KL EI N+ I Q + Sbjct: 94 ENLEHRYEMTVSEVRRLSHEVNDLQTDRENLKHQFEDQIEKLNSEISNQNSLILQKKDEL 153 Query: 348 SENANKALNYIEMFGDCESVDTIKKMI 374 ++ + E ES +I++ + Sbjct: 154 EKSIQRCSELEEKINSLESAQSIEQEV 180 >SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 1429 Score = 27.1 bits (57), Expect = 4.3 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 298 VSAPVLFALHENPKLYHGLENAKSVSDIDLDKLKVEILRTNAIEQTRSLYSEN 350 VS P+ LHE +H +EN K+ DI+ V+++ E++ Y +N Sbjct: 706 VSVPLPELLHEGYDTFHFVENPKATIDIESFWTPVDVVE----EKSAKTYIDN 754 >SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr 1|||Manual Length = 1234 Score = 27.1 bits (57), Expect = 4.3 Identities = 25/129 (19%), Positives = 56/129 (43%), Gaps = 4/129 (3%) Query: 251 QGALLLSGKGEKEQEIAYK-FGCYL-CLAWQASAEIQKITSDNKEHYSLVSAPVLFALHE 308 +G L+ G + Q+ A + C+ CL+W A+ I++ + LV P+ H Sbjct: 217 EGWLIRWGNALESQDDALECLKCFKSCLSWVATDSIREANIVSHICQILVQGPIFLKTHA 276 Query: 309 NPKLYHGLENAKSVSDIDLDKLKVEILRTNAIEQTRSLYSENANKALNYIEMFGDCESVD 368 +Y + + D L ++ E+L +++ +Y+ ++++N + Sbjct: 277 IDCIYICVTRTMEIDD-PLWEIVEEMLSPSSLYTLHQVYTA-TSESINIKTLSSTTPEYI 334 Query: 369 TIKKMIRTL 377 +KK+ T+ Sbjct: 335 LLKKLSETI 343 >SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizosaccharomyces pombe|chr 1|||Manual Length = 575 Score = 26.2 bits (55), Expect = 7.6 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 135 DRDSSMATSMFANKIAILIGDYLLVTANGMLARLKNQDLSYLISTALRDLSEGE 188 D+ S +S+F NK +L D + +NG +R N ++S AL D E + Sbjct: 29 DKKSPFESSVFENKTQVLPVDSVSRLSNGARSR-SNSNISLSEPHALNDTVEDQ 81 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.393 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,726,895 Number of Sequences: 5004 Number of extensions: 73675 Number of successful extensions: 191 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 187 Number of HSP's gapped (non-prelim): 10 length of query: 377 length of database: 2,362,478 effective HSP length: 74 effective length of query: 303 effective length of database: 1,992,182 effective search space: 603631146 effective search space used: 603631146 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 55 (26.2 bits)
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