GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000752-TA|BGIBMGA000752-PA|IPR008949|Terpenoid synthase
         (377 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   6.3  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 306 LHENPKLYHGLENAKS 321
           LH+NP L  GL+ A++
Sbjct: 29  LHDNPSLREGLKGART 44


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 143 SMFANKIAILIGDYLLVTANGMLARLKNQDLSYLISTALRDL 184
           S F N +      +++V    +LA+ + QD++ L  T  ++L
Sbjct: 44  SDFENYVTFFCSLFIVVILKLILAKYRQQDVTLLQITKAKNL 85


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.134    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,073
Number of Sequences: 317
Number of extensions: 3648
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 377
length of database: 114,650
effective HSP length: 58
effective length of query: 319
effective length of database: 96,264
effective search space: 30708216
effective search space used: 30708216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)