GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000752-TA|BGIBMGA000752-PA|IPR008949|Terpenoid synthase
         (377 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   2.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   2.5  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   3.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   4.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.3  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              22   9.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   9.9  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 315 GLENAKSVSDIDLDKLKVEILRTNAIEQTRSLYSENANKALNYI 358
           G  +A ++  I L K  +++LR    + T  L   N N+   +I
Sbjct: 344 GFPSAPTIDGIFLPKHPLDLLREADFKDTEILIGNNENEGTYFI 387


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 315 GLENAKSVSDIDLDKLKVEILRTNAIEQTRSLYSENANKALNYI 358
           G  +A ++  I L K  +++LR    + T  L   N N+   +I
Sbjct: 344 GFPSAPTIDGIFLPKHPLDLLREADFKDTEILIGNNENEGTYFI 387


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 47  ANLAMHLRKVVGSNHPIVKTAKNF 70
           A L + LR+ +GS   I+KT +NF
Sbjct: 88  AALVLRLREGIGSLARILKTIENF 111


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 8/13 (61%), Positives = 12/13 (92%)

Query: 181 LRDLSEGEFFGER 193
           +R LS+G+FFGE+
Sbjct: 280 IRTLSKGDFFGEK 292


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 137 DSSMATSMFANKIAILIGDYLLVTANGMLARLKN 170
           D + +TS   N +AI I  Y+ VT     A+ KN
Sbjct: 266 DVTCSTSSIFNLVAISIDRYIAVTQPIKYAKHKN 299


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 12/50 (24%), Positives = 23/50 (46%)

Query: 52  HLRKVVGSNHPIVKTAKNFLYNEHNNLQPWGLIILLLSKAVSPETSSLQN 101
           H+R+ +  N   +KT+K   Y +  + +  GL   L+     P++    N
Sbjct: 159 HIRRTLHMNRTSLKTSKIVSYPKSRSRKKGGLKDNLIPDKNDPDSKECSN 208


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query: 263 EQEIAYKFGCYLCLAWQ 279
           E+E    +GC+L   WQ
Sbjct: 61  EEENFRNYGCFLACIWQ 77


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 210 GEFDICSDTTPLKVNNIL 227
           G  +ICS  TP+ V N+L
Sbjct: 499 GFTEICSTATPMMVINML 516


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.134    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,639
Number of Sequences: 429
Number of extensions: 4447
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 8
length of query: 377
length of database: 140,377
effective HSP length: 59
effective length of query: 318
effective length of database: 115,066
effective search space: 36590988
effective search space used: 36590988
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)