Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000752-TA|BGIBMGA000752-PA|IPR008949|Terpenoid synthase
(377 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative ... 77 1e-14
At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS) id... 72 6e-13
At2g34630.1 68415.m04254 geranyl diphosphate synthase, putative ... 64 2e-10
At3g51450.1 68416.m05635 strictosidine synthase family protein s... 35 0.078
At1g32230.2 68414.m03965 WWE domain-containing protein / ceo pro... 33 0.41
At1g32230.1 68414.m03964 WWE domain-containing protein / ceo pro... 33 0.41
At4g36360.2 68417.m05164 beta-galactosidase, putative / lactase,... 32 0.72
At4g36360.1 68417.m05163 beta-galactosidase, putative / lactase,... 32 0.72
At5g42740.1 68418.m05205 glucose-6-phosphate isomerase, cytosoli... 29 3.9
At3g63170.1 68416.m07095 expressed protein 29 5.1
At2g37110.1 68415.m04553 expressed protein contains Pfam profile... 29 5.1
At4g20140.1 68417.m02947 leucine-rich repeat transmembrane prote... 29 6.7
At1g26190.1 68414.m03196 phosphoribulokinase/uridine kinase fami... 29 6.7
>At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative /
GPPS, putative / dimethylallyltransferase, putative /
prenyl transferase, putative similar to GI:11322965;
Except for first 55 amino acids, 52% identical to Prenyl
transferase (Cyanophora paradoxa) (gi 99282). Location
of est 120E9T7 (gb|T43950)
Length = 417
Score = 77.4 bits (182), Expect = 1e-14
Identities = 81/334 (24%), Positives = 150/334 (44%), Gaps = 45/334 (13%)
Query: 32 PTSFMNLRWLLSDEFANLAMHLRKVVGSNHPIVKTAKNFLYNEHNNLQPWGLIILLLSKA 91
P S L +++D+ L +L +VG+ +P++ +A +++ GL+ L+ S+A
Sbjct: 92 PISLETLFEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLV-SRA 150
Query: 92 VSPETSSLQNSALAQDQRILAELTEMIRTGHYVHRGLLNIAPDDRDSSMATSMFANKIAI 151
+ E + L+ L + R L E+ EMI T +H +L+ + R +F ++A+
Sbjct: 151 TA-ELAGLKE--LTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRVAV 207
Query: 152 LIGDYLLVTANGMLARLKNQDLSYLISTALRDLSEGEFFGERDNQNIPIPGKPVPFETGE 211
L GD++ A+ LA L+N ++ LIS ++D F +GE
Sbjct: 208 LAGDFMFAQASWYLANLENLEVIKLISQVIKD-----------------------FASGE 244
Query: 212 FDICSDTTPLKVNNILGEPIREWTLRTMFNGGTLLGRGCQGALLLSGKGEKEQEIAYKFG 271
S V + ++ L++ + +L+ +GA + S K E Y+FG
Sbjct: 245 IKQASSLFDCDVK------LDDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQMYQFG 298
Query: 272 CYLCLAWQASAEIQKITSDNKE---------HYSLVSAPVLFALHENPKLYHGLENAKSV 322
L L++Q +I T ++ ++APV+FAL P+L +E ++
Sbjct: 299 KNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFALENEPRLREIIE-SEFC 357
Query: 323 SDIDLDKLKVEILRT-NAIEQTRSLYSENANKAL 355
L++ +EI+R I++ + L E A AL
Sbjct: 358 EPGSLEE-AIEIVRNRGGIKKAQELAKEKAELAL 390
>At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS)
identical to solanesyl diphosphate synthase [Arabidopsis
thaliana] GI:19911233; contains Pfam profile PF00348:
Polyprenyl synthetase
Length = 406
Score = 72.1 bits (169), Expect = 6e-13
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
Query: 32 PTSFMNLRWLLSDEFANLAMHLRKVVGSNHPIVKTAKNFLYNEHNNLQPWGLIILLLSKA 91
P S + L L++ + L +L +VG+ +P++ +A ++ GL+ L+ S A
Sbjct: 81 PISLVTLFELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLV-SHA 139
Query: 92 VSPETSSLQNSALAQDQRILAELTEMIRTGHYVHRGLLNIAPDDRDSSMATSMFANKIAI 151
+ E + L+ L + R LAE+ EMI T +H +L+ + R +F ++A+
Sbjct: 140 TA-ELAGLKE--LTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAV 196
Query: 152 LIGDYLLVTANGMLARLKNQDLSYLISTALRDLSEGE 188
L GD++ A+ LA L+N ++ LIS ++D + GE
Sbjct: 197 LAGDFMFAQASWYLANLENLEVIKLISQVIKDFASGE 233
Score = 36.3 bits (80), Expect = 0.034
Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 233 EWTLRTMFNGGTLLGRGCQGALLLSGKGEKEQEIAYKFGCYLCLAWQASAEIQKITSDNK 292
E+ L++ + +L+ +GA + S E Y+FG L L++Q +I T +
Sbjct: 249 EYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTE 308
Query: 293 E---------HYSLVSAPVLFALHENPKLYHGLENAKSVSDIDLDKLKVEILRTNAIEQT 343
+ ++APV+FAL P+L +E+ + L++ + + I++
Sbjct: 309 QLGKPAGSDLAKGNLTAPVIFALEREPRLREIIESEFCEAG-SLEEAIEAVTKGGGIKRA 367
Query: 344 RSLYSENANKALNYIE 359
+ L E A+ A+ ++
Sbjct: 368 QELAREKADDAIKNLQ 383
>At2g34630.1 68415.m04254 geranyl diphosphate synthase, putative /
GPPS, putative / dimethylallyltransferase, putative /
prenyl transferase, putative identical to GI:11322965 A.
thaliana geranyl diphosphate synthase
Length = 321
Score = 63.7 bits (148), Expect = 2e-10
Identities = 36/99 (36%), Positives = 56/99 (56%)
Query: 90 KAVSPETSSLQNSALAQDQRILAELTEMIRTGHYVHRGLLNIAPDDRDSSMATSMFANKI 149
+A+ E++ + S L QR +AE+TEMI +H +L+ A R + NK+
Sbjct: 44 EALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKM 103
Query: 150 AILIGDYLLVTANGMLARLKNQDLSYLISTALRDLSEGE 188
++L GD+LL A G LA LKN ++ L++TA+ L GE
Sbjct: 104 SVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGE 142
>At3g51450.1 68416.m05635 strictosidine synthase family protein
similar to hemomucin [Drosophila
melanogaster][GI:1280434], strictosidine synthase
[Rauvolfia serpentina][SP|P15324]
Length = 371
Score = 35.1 bits (77), Expect = 0.078
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 124 VHRGLLNIAPDDRDSSMATSMFANKIAILIGDYLLVTANGMLARLKNQDLSYLISTALRD 183
VH+GLLNI+ D + + + T A+ + + D + V NG+L + Y ++ D
Sbjct: 131 VHKGLLNISGDGKKTELLTDE-ADGVKFKLTDAVTVADNGVL-YFTDASYKYTLNQLSLD 188
Query: 184 LSEGEFFG 191
+ EG+ FG
Sbjct: 189 MLEGKPFG 196
>At1g32230.2 68414.m03965 WWE domain-containing protein / ceo
protein, putative (CEO) contains Pfam domain, PF02825:
WWE domain; identical to cDNA for ceo protein (ceo gene)
GI:11044956
Length = 588
Score = 32.7 bits (71), Expect = 0.41
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 136 RDSSMATSMFANKIAILIGDYLLVTANGMLARLKNQDLSYLISTALRDLSEG 187
RD M + F K+ +++GD LL + L+NQ S I ++RD EG
Sbjct: 536 RDKKMTRAEFVRKLRVIVGDDLL---RSTITTLQNQPKSKEIPGSIRDHEEG 584
>At1g32230.1 68414.m03964 WWE domain-containing protein / ceo
protein, putative (CEO) contains Pfam domain, PF02825:
WWE domain; identical to cDNA for ceo protein (ceo gene)
GI:11044956
Length = 589
Score = 32.7 bits (71), Expect = 0.41
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 136 RDSSMATSMFANKIAILIGDYLLVTANGMLARLKNQDLSYLISTALRDLSEG 187
RD M + F K+ +++GD LL + L+NQ S I ++RD EG
Sbjct: 537 RDKKMTRAEFVRKLRVIVGDDLL---RSTITTLQNQPKSKEIPGSIRDHEEG 585
>At4g36360.2 68417.m05164 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
SP:P48980 from [Lycopersicon esculentum]
Length = 855
Score = 31.9 bits (69), Expect = 0.72
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 14/156 (8%)
Query: 59 SNHPIVKTAKNFLYNEHNNLQPWGLIIL-------LLSKAVSPETSSLQ----NSALAQD 107
+N+ A+ N H NL PW + IL + V +TS ++ ++ Q
Sbjct: 383 ANYDTESAARVLFNNVHYNLPPWSISILPDCRNAVFNTAKVGVQTSQMEMLPTDTKNFQW 442
Query: 108 QRILAELTEMIRTGHYVHRGLLNIAPDDRDSSMATSMFANKIAILIGDYLLVTANGMLAR 167
+ L +L+ + + + GLL RD+S ++ IGD G L
Sbjct: 443 ESYLEDLSSLDDSSTFTTHGLLEQINVTRDTS---DYLWYMTSVDIGDSESFLHGGELPT 499
Query: 168 LKNQDLSYLISTALRDLSEGEFFGERDNQNIPIPGK 203
L Q + + + G FG R N+ GK
Sbjct: 500 LIIQSTGHAVHIFVNGQLSGSAFGTRQNRRFTYQGK 535
>At4g36360.1 68417.m05163 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
SP:P48980 from [Lycopersicon esculentum]
Length = 856
Score = 31.9 bits (69), Expect = 0.72
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 14/156 (8%)
Query: 59 SNHPIVKTAKNFLYNEHNNLQPWGLIIL-------LLSKAVSPETSSLQ----NSALAQD 107
+N+ A+ N H NL PW + IL + V +TS ++ ++ Q
Sbjct: 383 ANYDTESAARVLFNNVHYNLPPWSISILPDCRNAVFNTAKVGVQTSQMEMLPTDTKNFQW 442
Query: 108 QRILAELTEMIRTGHYVHRGLLNIAPDDRDSSMATSMFANKIAILIGDYLLVTANGMLAR 167
+ L +L+ + + + GLL RD+S ++ IGD G L
Sbjct: 443 ESYLEDLSSLDDSSTFTTHGLLEQINVTRDTS---DYLWYMTSVDIGDSESFLHGGELPT 499
Query: 168 LKNQDLSYLISTALRDLSEGEFFGERDNQNIPIPGK 203
L Q + + + G FG R N+ GK
Sbjct: 500 LIIQSTGHAVHIFVNGQLSGSAFGTRQNRRFTYQGK 535
>At5g42740.1 68418.m05205 glucose-6-phosphate isomerase, cytosolic
(PGIC) identical to SP|P34795 Glucose-6-phosphate
isomerase, cytosolic (EC 5.3.1.9) (GPI) (Phosphoglucose
isomerase) (PGI) (Phosphohexose isomerase) (PHI)
{Arabidopsis thaliana}; contains Pfam profile PF00342:
glucose-6-phosphate isomerase
Length = 560
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 192 ERDNQNIPIPGKPVPFETGEFD 213
E + + + I G P+PFETGE D
Sbjct: 361 ESNGKGVSIDGLPLPFETGEID 382
>At3g63170.1 68416.m07095 expressed protein
Length = 279
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 60 NHPIVKTAKNFLYNEHNNLQPWGLIILLLSKAVSPETSSLQNSALAQDQRIL 111
+HPI++ A + + ++L PWG I L V P+T +++ +R+L
Sbjct: 50 SHPILEWAFS---SHRSSLSPWGSITLADESVVEPKTGFSFPASIGDSRRLL 98
>At2g37110.1 68415.m04553 expressed protein contains Pfam profile
PF04749: Protein of unknown function, DUF614
Length = 242
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 185 SEGEFFGERDNQNIPIPGKPVPFETGEFDICSDTTPLKVNNILGEPIREWTLRTMFNGG- 243
++G+ +RD + P+ P E G +D P+ +++GEPIR R +N G
Sbjct: 27 NDGKICSKRDAKAAPLVPPPAAEEYGW---TADGLPVSHGSVIGEPIR----RNQWNSGL 79
Query: 244 -TLLGR 248
T LGR
Sbjct: 80 FTCLGR 85
>At4g20140.1 68417.m02947 leucine-rich repeat transmembrane protein
kinase, putative Cf-2.2, Lycopersicon pimpinellifolium,
PIR:T10515
Length = 1249
Score = 28.7 bits (61), Expect = 6.7
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 37 NLRWLLSDEFANLAMHLRKVVGSNHPIVKTAKNFLYNEHN-------NLQPWGLIILLLS 89
NL + +EF N++ L V+ +NH K+ N N Q G I + LS
Sbjct: 298 NLTGEIPEEFWNMSQLLDLVLANNHLSGSLPKSICSNNTNLEQLVLSGTQLSGEIPVELS 357
Query: 90 KAVSPETSSLQNSALAQD-QRILAELTEMIRTGHYVHRGLL 129
K S + L N++LA L EL E+ T Y+H L
Sbjct: 358 KCQSLKQLDLSNNSLAGSIPEALFELVEL--TDLYLHNNTL 396
>At1g26190.1 68414.m03196 phosphoribulokinase/uridine kinase family
protein weak similarity to SP|Q59190 Uridine kinase (EC
2.7.1.48) (Uridine monophosphokinase) (Cytidine
monophosphokinase) {Borrelia burgdorferi}; contains Pfam
profile PF00485: Phosphoribulokinase / Uridine kinase
family
Length = 674
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 88 LSKAVSPETSSLQNSALAQDQRILAELTEMIRTGHYVHRGLLNIAPDDRDSSMATSMFAN 147
L+ ++ P +SS +S LA+D ++ E++ + R V L N+ R+SS S A
Sbjct: 567 LTNSIMPHSSS--SSQLAKDSPLMEEISTISRGQRQVMHQLDNLCNLMRESSAERSRLAR 624
Query: 148 KIAILIGDYLLVTANGMLARLKNQDLSYLISTAL 181
+ G+ + + L+ +++ L +++ A+
Sbjct: 625 TGSSNSGNRGRSSKSSFLSNVESNKLPLVLTVAI 658
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,828,618
Number of Sequences: 28952
Number of extensions: 373082
Number of successful extensions: 809
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 796
Number of HSP's gapped (non-prelim): 16
length of query: 377
length of database: 12,070,560
effective HSP length: 82
effective length of query: 295
effective length of database: 9,696,496
effective search space: 2860466320
effective search space used: 2860466320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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