Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000750-TA|BGIBMGA000750-PA|undefined
         (97 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              20   4.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   6.3  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     20   6.3  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 4.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 52 NIGSHVSVALSKYSAVGDDMYLNVH 76
          N+  ++  A+ K+S V  D   N H
Sbjct: 58 NVQLYIECAMKKFSFVDKDGNFNEH 82


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 19.8 bits (39), Expect = 6.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 54  GSHVSVALSKYSAVGDDMYL 73
           G   SV  +  S+V DD+YL
Sbjct: 404 GVPTSVIQAATSSVSDDLYL 423


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.8 bits (39), Expect = 6.3
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 86  RWNVSGTV 93
           RW++SGTV
Sbjct: 166 RWSISGTV 173


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.132    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,579
Number of Sequences: 429
Number of extensions: 889
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 97
length of database: 140,377
effective HSP length: 49
effective length of query: 48
effective length of database: 119,356
effective search space:  5729088
effective search space used:  5729088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.4 bits)
S2: 38 (19.4 bits)