Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000750-TA|BGIBMGA000750-PA|undefined
(97 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0001 - 2857651-2857923,2858089-2858283 32 0.063
06_01_1049 + 8257930-8258316 31 0.19
01_01_1149 - 9134390-9134600,9134732-9134790,9135650-9135724,913... 30 0.34
08_01_0768 + 7408004-7408159,7409101-7409297,7427823-7428206,742... 28 1.0
04_03_0212 + 12697854-12698549,12698655-12698930,12698991-126990... 28 1.0
09_06_0296 - 22104796-22104916,22104967-22105022,22105094-221051... 27 1.8
09_04_0626 - 19057771-19058031,19058850-19058956,19059885-19059960 27 2.4
05_06_0223 - 26525618-26526112,26526203-26526370,26526649-265274... 27 2.4
01_07_0114 + 41161923-41163251 27 2.4
11_01_0441 - 3363069-3363137,3363273-3363430,3363549-3363613,336... 27 3.1
02_05_1348 + 35840197-35841291 27 3.1
12_01_0444 - 3502460-3502522,3502737-3502741,3502987-3503051,350... 26 4.1
01_07_0355 - 42973861-42974303,42974821-42974925,42975338-429754... 26 4.1
01_01_0930 + 7347680-7347886,7348030-7348082,7348175-7348247,734... 26 4.1
11_06_0523 - 24570683-24571126,24571210-24571808,24573300-24573600 26 5.5
09_02_0583 + 10903232-10903289,10903478-10904021,10906612-10907122 26 5.5
05_03_0584 + 15753216-15753464,15754267-15754479,15754578-15754703 26 5.5
03_04_0061 - 16949038-16950006 25 7.2
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 25 9.5
06_03_1265 + 28847782-28849803 25 9.5
05_05_0144 + 22683294-22683536 25 9.5
>09_02_0001 - 2857651-2857923,2858089-2858283
Length = 155
Score = 32.3 bits (70), Expect = 0.063
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 30 GSPERYVAVLLTAKSLSVMSRRNIGSHVSVALSKYSAVGDDMYLNVHGVGCYGYVERW 87
G ER + +L S ++ +++ + V VAL SAVG + G G YG W
Sbjct: 46 GMVERRITSMLV--SFAIKNKQQVAGPVLVALMMASAVGSSVDFGQEGAGDYGVATGW 101
>06_01_1049 + 8257930-8258316
Length = 128
Score = 30.7 bits (66), Expect = 0.19
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 51 RNIGSHVSVALSKYSAVGDDMYLNVHGVGC 80
R+ GS S + ++ VGD + VHG+GC
Sbjct: 94 RDAGSRGSYGVLRHCVVGDSWLVGVHGMGC 123
>01_01_1149 -
9134390-9134600,9134732-9134790,9135650-9135724,
9135815-9135934,9136012-9136183,9136277-9136335,
9136516-9136572,9136900-9136998,9137088-9137114,
9137607-9137649,9137779-9138023
Length = 388
Score = 29.9 bits (64), Expect = 0.34
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 4 GKWCPSRREWSSPPDVARRVYSSVFLGSPERYVAVLLTAKSLSVM 48
G W + + +SPP++ + S V SP +Y A L SLSV+
Sbjct: 191 GTWSANYHQTNSPPEIDDQKESLVSEFSPAQYAASPLIKNSLSVV 235
>08_01_0768 +
7408004-7408159,7409101-7409297,7427823-7428206,
7428456-7428837
Length = 372
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 2 YVGKWCPSRREWSSPPDVARRVYSSVFLGSPER 34
Y GK P + + P AR V + + GSPER
Sbjct: 86 YQGKQLPEQEGDDAEPHAAREVTAVILTGSPER 118
>04_03_0212 +
12697854-12698549,12698655-12698930,12698991-12699038,
12699659-12699715,12700965-12701163,12702267-12702373,
12702586-12702759,12702844-12703083,12703638-12703693,
12704499-12704622
Length = 658
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 2 YVGKWCPSRREWSSPPDVARRVYSSVFLGSPERYVAV 38
Y GK+C +E SSP D+ + ++ +L E+Y+ +
Sbjct: 514 YKGKFCVILKEGSSPEDMLKSLFHVNYLYWLEKYLGI 550
>09_06_0296 -
22104796-22104916,22104967-22105022,22105094-22105189,
22106431-22106505,22107339-22107639,22107728-22107798,
22109340-22109468,22109566-22109760,22109916-22110082,
22110175-22110271,22110689-22110697
Length = 438
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 5 KWCPSRREWSSPPDVARRVYSSVFLGSPERYVAVLL 40
+W R W PP A+ S +FL + R ++L
Sbjct: 330 RWKSRRSTWGKPPATAKTPVSDLFLRATARRPCIIL 365
>09_04_0626 - 19057771-19058031,19058850-19058956,19059885-19059960
Length = 147
Score = 27.1 bits (57), Expect = 2.4
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 18 DVARRV-YSSVFLGSPERYVAVLLTAKSLSVMSRRNIGSHVSVALSKYSAVGDDMYLNVH 76
D AR S FL S RY ++LTA +L + R+N H +++Y D + N
Sbjct: 75 DAARAACISQAFLRSWRRYPNLILTAGTLGLELRKNWKVH----MARYFDRVDHILKNHS 130
Query: 77 GVG 79
G+G
Sbjct: 131 GIG 133
>05_06_0223 -
26525618-26526112,26526203-26526370,26526649-26527473,
26527898-26528004,26529701-26529767
Length = 553
Score = 27.1 bits (57), Expect = 2.4
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 18 DVARRV-YSSVFLGSPERYVAVLLTAKSLSVMSRRNIGSHVSVALSKYSAVGDDMYLNVH 76
D AR S FL S RY ++LT ++L + ++ H V +++Y D + N
Sbjct: 72 DAARAACVSQAFLRSWRRYPNLILTTETLGLEQKK----HWKVHMARYFTRVDHILKNHS 127
Query: 77 GVG 79
G+G
Sbjct: 128 GIG 130
>01_07_0114 + 41161923-41163251
Length = 442
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 49 SRRNIGSHVSVALSKYSAVGD-DMYLNVHGVGCYGYVE 85
++RN G+ ++ +S+++ GD +YL + G G Y E
Sbjct: 195 AQRNFGNKFALCMSQFATFGDAPVYLGMEGRGFVDYRE 232
>11_01_0441 -
3363069-3363137,3363273-3363430,3363549-3363613,
3363709-3363777,3363881-3363973,3364081-3364184,
3364327-3364410,3364486-3364693,3364809-3364880,
3365005-3365080,3365788-3365900,3366006-3366153,
3366996-3367073,3367968-3368097,3368296-3368486,
3368644-3368704,3368847-3368956,3369090-3369312
Length = 683
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 43 KSLSVMSRRNIGSHVSVALSKYSAVGDDMYLN 74
K L +S+ IG V +ALS Y + YLN
Sbjct: 528 KYLKKLSKSEIGWDVRIALSAYGSFSSRAYLN 559
>02_05_1348 + 35840197-35841291
Length = 364
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 61 LSKYSAVGDDMYLNVHGVGCYGY 83
L+K VGDD +++ +G YGY
Sbjct: 203 LAKLGPVGDDTHVSTRVMGTYGY 225
>12_01_0444 -
3502460-3502522,3502737-3502741,3502987-3503051,
3503301-3503369,3503487-3503579,3503667-3503770,
3503926-3504006,3504096-3504167,3504227-3504231,
3505788-3505865,3506849-3506978,3507216-3507406,
3507528-3507588,3507916-3508025,3508155-3508239
Length = 403
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 42 AKSLSVMSRRNIGSHVSVALSKYSAVGDDMYLN 74
AK L + R IG V VAL Y + YLN
Sbjct: 300 AKYLDKLKRSEIGWDVRVALGVYGSFSSRAYLN 332
>01_07_0355 -
42973861-42974303,42974821-42974925,42975338-42975461,
42975601-42975743,42975896-42976031,42976112-42976434,
42976942-42976999
Length = 443
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 43 KSLSVMSRRNIGSHVS-VALSKYSAVGDDMYLNVHGVGCYGY-VERWNVSGTVLSA 96
K+ +V+ N + +S L+K GD +++ +G YGY + +GT+L A
Sbjct: 212 KTSNVLLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGTLLEA 267
>01_01_0930 +
7347680-7347886,7348030-7348082,7348175-7348247,
7348493-7348594,7348697-7348798,7348888-7348959,
7349067-7349129,7349210-7349251,7349620-7349679,
7349755-7349865,7350044-7350214,7350392-7350482,
7350571-7350845
Length = 473
Score = 26.2 bits (55), Expect = 4.1
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 11/65 (16%)
Query: 1 MYVGKWCP-SRREWSS------PPDVARRVYSSVFLGSPERYVAVLLTAKSLSVMSRRNI 53
+++G+W P S +++S P R+YS V L S +Y+ T +SLS R++
Sbjct: 385 VFLGQWTPESVGDYASGTNHVLPTYGYARMYSGVSLNSFLKYI----TVQSLSEEGLRSL 440
Query: 54 GSHVS 58
G HV+
Sbjct: 441 GPHVA 445
>11_06_0523 - 24570683-24571126,24571210-24571808,24573300-24573600
Length = 447
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 10 RREWSSPPDVARRVYSSVFLGSPERYVAVLLTAKSLSVMSRRNIGSHVSVAL 61
RR+ S P RR Y + G +A +LT ++++ ++G+ AL
Sbjct: 271 RRDGSEPWTSTRRRYDTSSTGLRPPPLAAILTHNAIAIAGEESLGAAAVAAL 322
>09_02_0583 + 10903232-10903289,10903478-10904021,10906612-10907122
Length = 370
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 35 YVAVLLTAKSLSVMSRRNIGSHVSV 59
Y VL +S+ + RRN+GS+VS+
Sbjct: 175 YHPVLAANQSMCLFDRRNMGSNVSI 199
>05_03_0584 + 15753216-15753464,15754267-15754479,15754578-15754703
Length = 195
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 28 FLGSPERYVAVLLTAKSLSVMSRRN 52
F G+ Y ++ TAKS+SV S RN
Sbjct: 89 FRGNSLDYKDIIYTAKSISVCSNRN 113
>03_04_0061 - 16949038-16950006
Length = 322
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 22 RVYSSVFLGSPERYVAVLLTA----KSLSVMSRRNIGSHVSVALS 62
RV +VF SP RY A + TA +S S + +N+ + +S+A++
Sbjct: 266 RVPRAVFRASPRRYYAAVRTARKARRSASGIGWKNLVAAMSLAVA 310
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 34 RYVAVLLTAKSLSVMSRRNIGSHVS 58
+YV V L K+L+VM +GS V+
Sbjct: 220 KYVGVSLVGKTLAVMGFGKVGSEVA 244
>06_03_1265 + 28847782-28849803
Length = 673
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 12 EWSSPPDVARRVYSSVFLGSPERYVAVLLTAKSLSVMS--RRNIGSHVSVALSKYSAVGD 69
EW + + YS+VFL +A LL+ + + + S R V L ++A D
Sbjct: 511 EWLREHEQYKDYYSAVFLRESWGTLAPLLSREGIILFSKGRATARDLVKQRLKSFNANFD 570
Query: 70 DMY 72
+MY
Sbjct: 571 EMY 573
>05_05_0144 + 22683294-22683536
Length = 80
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 77 GVGCYGYVERWNVSGTVLS 95
G GCY Y +++ SG+ +S
Sbjct: 4 GYGCYSYYQQYKSSGSFIS 22
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.132 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,066,666
Number of Sequences: 37544
Number of extensions: 99452
Number of successful extensions: 271
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 256
Number of HSP's gapped (non-prelim): 21
length of query: 97
length of database: 14,793,348
effective HSP length: 70
effective length of query: 27
effective length of database: 12,165,268
effective search space: 328462236
effective search space used: 328462236
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 52 (25.0 bits)
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