GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000750-TA|BGIBMGA000750-PA|undefined
         (97 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   0.85 
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    21   6.0  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 5/28 (17%)

Query: 4    GKWCPSRREWSSPPDVARRVYSSVFLGS 31
            G W PS+ +WS P       ++++F+GS
Sbjct: 2778 GSWDPSKWDWSQP-----GTWNALFIGS 2800


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 15  SPPDVARRVYSSVFLGSPERYVAVLLTAKSLSVMSRRN 52
           SP  V   V  S+  G+P   V+   T  + S +S RN
Sbjct: 179 SPGSVVESVSRSLKSGNPSTAVSSSSTNNNTSNISNRN 216


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.132    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,798
Number of Sequences: 2123
Number of extensions: 2978
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 97
length of database: 516,269
effective HSP length: 55
effective length of query: 42
effective length of database: 399,504
effective search space: 16779168
effective search space used: 16779168
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)