Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000749-TA|BGIBMGA000749-PA|undefined
(104 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 28 0.26
SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component Sec9|Sc... 28 0.35
SPBC1734.02c |cdc27|SPBC337.18c|DNA polymerase delta subunit Cdc... 27 0.60
SPBC1703.03c |||armadillo repeat protein, unknown biological rol... 27 0.60
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 25 1.8
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 25 1.8
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 25 2.4
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 25 2.4
SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr 1|... 25 2.4
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 25 3.2
SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 3.2
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 3.2
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 25 3.2
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 4.3
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 24 4.3
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 24 5.6
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 24 5.6
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 24 5.6
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 23 7.4
SPBC1105.15c |htd2||3-hydroxyacyl-ACP dehydratase Htd2 |Schizosa... 23 7.4
SPBC3B9.06c |apg3||autophagy associated protein Apg3 |Schizosacc... 23 7.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 23 9.8
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 23 9.8
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 23 9.8
SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1 |Schizosaccha... 23 9.8
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 23 9.8
SPAC22E12.18 |||conserved fungal protein|Schizosaccharomyces pom... 23 9.8
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 28.3 bits (60), Expect = 0.26
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 74 YDDLNDLIVEDDESDTDNVTNSVEEDTGD 102
YD +DL VE+DE D ++ +N D+ +
Sbjct: 344 YDGFSDLDVEEDEDDVESSSNEEVSDSDE 372
>SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component
Sec9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 27.9 bits (59), Expect = 0.35
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 49 KDKTKIEVRPFLNKNIRVADVTDKVYDDL--NDLIVEDDESDTDNVTNSVEEDTGDNY 104
K + RP ++++ D D +L I DDES TD + ++ + GD Y
Sbjct: 124 KSSAAVTERPSMHRSAPSQDTLDLKKQELFAGARIQNDDESTTDTIPHNDDGTEGDEY 181
>SPBC1734.02c |cdc27|SPBC337.18c|DNA polymerase delta subunit
Cdc27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 27.1 bits (57), Expect = 0.60
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 55 EVRPFLNKNIRVADVTDKVYDDLNDLIVEDDESDTDNVTNSVEEDTGDN 103
E P L K ++++ + DDL +++ +DES + + E+D D+
Sbjct: 216 EKEPLLPKEEKLSEQAKRERDDLKNIMQLEDESVSTTSVHDSEDDNLDS 264
>SPBC1703.03c |||armadillo repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 664
Score = 27.1 bits (57), Expect = 0.60
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 66 VADVTDKVYDDLNDLIVEDDESDTDNVTNSVEED 99
+AD TD++ + + L+ ++D S D+++N V ED
Sbjct: 353 LADGTDELEEQEDSLMEDEDLSYMDDMSNVVNED 386
Score = 23.4 bits (48), Expect = 7.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 55 EVRPFLNKNIRVADVTDKVYDDLNDLIVE 83
E R +L KN V+ + D++ DD +++VE
Sbjct: 68 EGRLYLLKNGLVSKLIDRISDDSVEVVVE 96
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 62 KNIRVADVTDKVYDDLNDLIVEDDESDTD 90
+N + D D+ D+ + I+EDDE D D
Sbjct: 340 ENKKRQDDVDQATDNNTNTILEDDEKDND 368
Score = 23.0 bits (47), Expect = 9.8
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 59 FLNKNIRVADVTDKVYDDLNDLIVEDDESDTDNVTNSV-EEDTGDN 103
F+ KN + + DK N +D + TDN TN++ E+D DN
Sbjct: 325 FMEKNQQRREQQDK---GENKKRQDDVDQATDNNTNTILEDDEKDN 367
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 62 KNIRVADVTDKVYDDLNDLIVEDDESDTD 90
+N + D D+ D+ + I+EDDE D D
Sbjct: 340 ENKKRQDDVDQATDNNTNTILEDDEKDND 368
Score = 23.0 bits (47), Expect = 9.8
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 59 FLNKNIRVADVTDKVYDDLNDLIVEDDESDTDNVTNSV-EEDTGDN 103
F+ KN + + DK N +D + TDN TN++ E+D DN
Sbjct: 325 FMEKNQQRREQQDK---GENKKRQDDVDQATDNNTNTILEDDEKDN 367
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 25.0 bits (52), Expect = 2.4
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 75 DDLNDLIVEDDESDTDNVTNSVEED 99
DDL + VE+++ + D++T+ +ED
Sbjct: 68 DDLPQVDVENEDEEEDSITSFQDED 92
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.0 bits (52), Expect = 2.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 68 DVTDKVYDDLNDLIVEDDESDTDNVTNSVEEDTGD 102
D D DD+N+ +DDES + + + +ED +
Sbjct: 218 DTNDGTDDDINNNEYKDDESSSGSESYERDEDVDE 252
>SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 623
Score = 25.0 bits (52), Expect = 2.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 83 EDDESDTDNVTNSVEEDTGDNY 104
+++ SDTD +SVEED +Y
Sbjct: 515 QENNSDTDTENDSVEEDQVTSY 536
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 24.6 bits (51), Expect = 3.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 78 NDLIVEDDESDTDNVTNSVEEDT 100
+ ++ + S T+N+TN V EDT
Sbjct: 197 SQILTGNISSKTENITNGVSEDT 219
>SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 547
Score = 24.6 bits (51), Expect = 3.2
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 76 DLNDLIVEDDESDTDNVTNSVEEDTGDN 103
D DL ++ +DN T+ E+D+G++
Sbjct: 57 DEEDLTSTNNTRSSDNTTSDTEDDSGED 84
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 24.6 bits (51), Expect = 3.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 78 NDLIVEDDESDTDNVTNSVEEDTGDNY 104
+DL+V DDE D V+ E N+
Sbjct: 541 SDLVVSDDEEDFFKVSKVANESISSNH 567
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 24.6 bits (51), Expect = 3.2
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 60 LNKNIRVADVTDKVYDDLN-DLIVEDDESDTDNVTNSVEED 99
++ I +V D + D N D+ +E + ++ DN+T + E D
Sbjct: 544 ISDKIPTVNVADDMKDGTNNDVEIEKNSTEIDNITFNDEAD 584
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 24.2 bits (50), Expect = 4.3
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 44 INYLRKDKTKIEVRPFLNKNIRVADVTDKVYDDLNDLIVEDDESDTDNVTNSV 96
+ Y DK +I R L ++ + + DL + D+S T N+T S+
Sbjct: 625 LEYPNSDK-RILARASLTSGLKSNNTLRALSQDLKNCAKSKDDSTTQNLTESL 676
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 24.2 bits (50), Expect = 4.3
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 68 DVTDKVYDDLNDLIVEDDESDTDNVTNS 95
D +D + +D ++ V+D++ D D+V S
Sbjct: 367 DNSDDIVEDGDNAFVDDEDDDKDSVNAS 394
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 23.8 bits (49), Expect = 5.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 61 NKNIRVADVTDKVYDDLNDLIVEDDESDTD 90
+ NI + + +V D+ N + +DDE D D
Sbjct: 316 SSNIEASQSSLEVKDEANRKVDDDDEDDDD 345
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 23.8 bits (49), Expect = 5.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 71 DKVYDDLNDLIVEDDESDTDNVTNSV 96
D V D ND EDD D D+V N +
Sbjct: 45 DDVLDLYNDT-TEDDADDADDVNNYI 69
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 23.8 bits (49), Expect = 5.6
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 75 DDLNDLIVEDDESDTDNVTNSVEEDTGDN 103
D+ + +VE+D D D VE++ G++
Sbjct: 42 DEAAEALVEEDIEDLDGEALDVEDEEGED 70
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 23.4 bits (48), Expect = 7.4
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 63 NIRVADVTDKVYDDLNDLIVEDDESDTDNVTNS 95
N+ V +V ++ Y DLN+L E + N+T S
Sbjct: 481 NVDVEEVVNQRYPDLNEL--ESQLTSHTNITTS 511
>SPBC1105.15c |htd2||3-hydroxyacyl-ACP dehydratase Htd2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 300
Score = 23.4 bits (48), Expect = 7.4
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 51 KTKIEVRPFLNKNIRVADVTDKVYDDLNDLIVEDDES 87
K+ +P K + + K+YD + L +E+D +
Sbjct: 126 KSSFLTKPTSEKQTKHVYIRRKIYDSQHQLCIEEDRT 162
>SPBC3B9.06c |apg3||autophagy associated protein Apg3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 275
Score = 23.4 bits (48), Expect = 7.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 72 KVYDDLNDLIVEDDESDTDNVTNSVEEDTGDNY 104
K D L ++D+E D V+ ++ED G Y
Sbjct: 130 KELSDSGPLPLKDEEDDDQMVSPVIKEDEGRYY 162
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 23.0 bits (47), Expect = 9.8
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 75 DDLNDLIVEDDESDTDNVTNSVEED 99
DD +DL +D++ + D +V+E+
Sbjct: 4148 DDFSDLAEDDEKMNEDGFEENVQEN 4172
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 23.0 bits (47), Expect = 9.8
Identities = 7/24 (29%), Positives = 17/24 (70%)
Query: 79 DLIVEDDESDTDNVTNSVEEDTGD 102
+ + E+D +++D++TN+V + D
Sbjct: 263 ETLEEEDGAESDSITNTVSNASSD 286
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 23.0 bits (47), Expect = 9.8
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 70 TDKVYDDLNDLIVEDDESDTDNV 92
TD + +D +D++ ED++ D + +
Sbjct: 334 TDSLAEDEDDILEEDEDEDEEEL 356
>SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 23.0 bits (47), Expect = 9.8
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 58 PFLNKNIRVADVTDKVYDDLNDLIVEDDESDTDNVTNSVEEDTGDNY 104
P N N + ++TD V+ + L + D+ S E+ D++
Sbjct: 23 PERNDNQGIVEITDLVFSSESKLTQRKESRDSKTFVPSFLEELDDDH 69
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 23.0 bits (47), Expect = 9.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 82 VEDDESDTDNVTNSVEEDTG 101
++ DESD D V E+TG
Sbjct: 130 IDKDESDVDCAIREVYEETG 149
>SPAC22E12.18 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 23.0 bits (47), Expect = 9.8
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 47 LRKDKTKIEV-RPFLNKNIRVADVTDKVYDDLNDLIVEDDESDTDNVTN 94
++K + K E FL + A T DD+ I EDDE+ + + N
Sbjct: 250 IKKRRIKNEYPNTFLGELFNAAKQTSDSIDDIVAQIQEDDENFENELDN 298
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.137 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,358
Number of Sequences: 5004
Number of extensions: 15586
Number of successful extensions: 75
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 47
Number of HSP's gapped (non-prelim): 33
length of query: 104
length of database: 2,362,478
effective HSP length: 63
effective length of query: 41
effective length of database: 2,047,226
effective search space: 83936266
effective search space used: 83936266
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)
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