GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000749-TA|BGIBMGA000749-PA|undefined
         (104 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26403-1|AAB60377.1|  228|Homo sapiens LERK-7 precursor protein.       31   0.64 
BC075055-1|AAH75055.1|  228|Homo sapiens ephrin-A5 protein.            31   0.64 
BC075054-1|AAH75054.1|  228|Homo sapiens ephrin-A5 protein.            31   0.64 
BC015802-1|AAH15802.1|  243|Homo sapiens RWD domain containing 1...    30   1.1  
AL121953-5|CAC14427.1|  243|Homo sapiens RWD domain containing 1...    30   1.1  
AF132958-1|AAD27733.1|  241|Homo sapiens CGI-24 protein protein.       30   1.1  
BC104174-1|AAI04175.1|  240|Homo sapiens ovary-specific acidic p...    29   3.4  
BC104173-1|AAI04174.1|  240|Homo sapiens ovary-specific acidic p...    29   3.4  
AK057426-1|BAB71480.1|  723|Homo sapiens protein ( Homo sapiens ...    29   3.4  
AF484960-1|AAM09685.1|  240|Homo sapiens corneal endothelium spe...    29   3.4  
AF329088-1|AAG59896.1|  268|Homo sapiens ovary-specific acidic p...    29   3.4  
D55655-1|BAA23494.1|  399|Homo sapiens cardiac calsequestrin pro...    28   4.5  
DQ847274-1|ABH10140.1|  914|Homo sapiens epithelial cell transfo...    28   4.5  
BC112086-1|AAI12087.1|  883|Homo sapiens epithelial cell transfo...    28   4.5  
BC022288-1|AAH22288.1|  399|Homo sapiens calsequestrin 2 (cardia...    28   4.5  
AY376439-1|AAQ83675.1|  882|Homo sapiens epithelial cell transfo...    28   4.5  
AL450389-3|CAI23373.1|  399|Homo sapiens calsequestrin 2 (cardia...    28   4.5  
AL449264-1|CAI14532.1|  399|Homo sapiens calsequestrin 2 (cardia...    28   4.5  
AK023267-1|BAB14498.1|  798|Homo sapiens protein ( Homo sapiens ...    28   4.5  

>U26403-1|AAB60377.1|  228|Homo sapiens LERK-7 precursor protein.
          Length = 228

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 51  KTKIEVRPFLNKNIRVADVTDKVYDDLNDLIVEDDESDTDNVTNSVEEDTGDN 103
           K K+ VRP  N  ++   V D+V+D +ND +    E   D V  S E   G+N
Sbjct: 153 KLKVFVRP-TNSCMKTIGVHDRVFD-VNDKVENSLEPADDTVHESAEPSRGEN 203


>BC075055-1|AAH75055.1|  228|Homo sapiens ephrin-A5 protein.
          Length = 228

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 51  KTKIEVRPFLNKNIRVADVTDKVYDDLNDLIVEDDESDTDNVTNSVEEDTGDN 103
           K K+ VRP  N  ++   V D+V+D +ND +    E   D V  S E   G+N
Sbjct: 153 KLKVFVRP-TNSCMKTIGVHDRVFD-VNDKVENSLEPADDTVHESAEPSRGEN 203


>BC075054-1|AAH75054.1|  228|Homo sapiens ephrin-A5 protein.
          Length = 228

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 51  KTKIEVRPFLNKNIRVADVTDKVYDDLNDLIVEDDESDTDNVTNSVEEDTGDN 103
           K K+ VRP  N  ++   V D+V+D +ND +    E   D V  S E   G+N
Sbjct: 153 KLKVFVRP-TNSCMKTIGVHDRVFD-VNDKVENSLEPADDTVHESAEPSRGEN 203


>BC015802-1|AAH15802.1|  243|Homo sapiens RWD domain containing 1
           protein.
          Length = 243

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)

Query: 68  DVTDKVYDDLNDLIVEDDESDTDNVTNSVEEDTGD 102
           +V + ++ +++DL +EDDE D D      E D+ D
Sbjct: 209 EVDESLFQEMDDLELEDDEDDPDYNPADPESDSAD 243


>AL121953-5|CAC14427.1|  243|Homo sapiens RWD domain containing 1
           protein.
          Length = 243

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)

Query: 68  DVTDKVYDDLNDLIVEDDESDTDNVTNSVEEDTGD 102
           +V + ++ +++DL +EDDE D D      E D+ D
Sbjct: 209 EVDESLFQEMDDLELEDDEDDPDYNPADPESDSAD 243


>AF132958-1|AAD27733.1|  241|Homo sapiens CGI-24 protein protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)

Query: 68  DVTDKVYDDLNDLIVEDDESDTDNVTNSVEEDTGD 102
           +V + ++ +++DL +EDDE D D      E D+ D
Sbjct: 207 EVDESLFQEMDDLELEDDEDDPDYNPADPESDSAD 241


>BC104174-1|AAI04175.1|  240|Homo sapiens ovary-specific acidic
           protein protein.
          Length = 240

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 49  KDKTKIEVRPFLNKNIRVADVTDKVYDDLNDLIVEDDESDTD 90
           K+KTK E+ PF  +   VA+      +   +LIVE +  D +
Sbjct: 82  KEKTKAEIHPFQGEKENVAETEKASSEAPEELIVEAEVVDAE 123


>BC104173-1|AAI04174.1|  240|Homo sapiens ovary-specific acidic
           protein protein.
          Length = 240

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 49  KDKTKIEVRPFLNKNIRVADVTDKVYDDLNDLIVEDDESDTD 90
           K+KTK E+ PF  +   VA+      +   +LIVE +  D +
Sbjct: 82  KEKTKAEIHPFQGEKENVAETEKASSEAPEELIVEAEVVDAE 123


>AK057426-1|BAB71480.1|  723|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32864 fis, clone TESTI2003625. ).
          Length = 723

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 47  LRKDKTKIEVRPFLNKNIRVADVTDKVYDDLNDLIVEDDESDTDNV 92
           +R  K K++  P  N+   + D   K YD   DL  ++DE + D+V
Sbjct: 461 IRFMKEKLKSMPCRNQGY-ILDGFPKTYDQAKDLFNQEDEEEEDDV 505


>AF484960-1|AAM09685.1|  240|Homo sapiens corneal endothelium
           specific protein 1 protein.
          Length = 240

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 49  KDKTKIEVRPFLNKNIRVADVTDKVYDDLNDLIVEDDESDTD 90
           K+KTK E+ PF  +   VA+      +   +LIVE +  D +
Sbjct: 82  KEKTKAEIHPFQGEKENVAETEKASSEAPEELIVEAEVVDAE 123


>AF329088-1|AAG59896.1|  268|Homo sapiens ovary-specific acidic
           protein protein.
          Length = 268

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 49  KDKTKIEVRPFLNKNIRVADVTDKVYDDLNDLIVEDDESDTD 90
           K+KTK E+ PF  +   VA+      +   +LIVE +  D +
Sbjct: 82  KEKTKAEIHPFQGEKENVAETEKASSEAPEELIVEAEVVDAE 123


>D55655-1|BAA23494.1|  399|Homo sapiens cardiac calsequestrin
           protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 68  DVTDKVYDDLNDLI-VEDDESDTDNVTNSVEEDTGDN 103
           ++ D + D L+  I  EDD+ D D+  NS EED  D+
Sbjct: 357 ELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDS 393


>DQ847274-1|ABH10140.1|  914|Homo sapiens epithelial cell
           transforming sequence 2 oncogene protein splice variant
           b protein.
          Length = 914

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 55  EVRPFLNKNIRVADVTDKVYDDLNDLIVEDDES 87
           E++        + DV  K+ DDL DLIV  DES
Sbjct: 497 EIKTIFGSIPDIFDVHTKIKDDLEDLIVNWDES 529


>BC112086-1|AAI12087.1|  883|Homo sapiens epithelial cell
           transforming sequence 2 oncogene protein.
          Length = 883

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 55  EVRPFLNKNIRVADVTDKVYDDLNDLIVEDDES 87
           E++        + DV  K+ DDL DLIV  DES
Sbjct: 466 EIKTIFGSIPDIFDVHTKIKDDLEDLIVNWDES 498


>BC022288-1|AAH22288.1|  399|Homo sapiens calsequestrin 2 (cardiac
           muscle) protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 68  DVTDKVYDDLNDLI-VEDDESDTDNVTNSVEEDTGDN 103
           ++ D + D L+  I  EDD+ D D+  NS EED  D+
Sbjct: 357 ELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDS 393


>AY376439-1|AAQ83675.1|  882|Homo sapiens epithelial cell
           transforming 2 protein.
          Length = 882

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 55  EVRPFLNKNIRVADVTDKVYDDLNDLIVEDDES 87
           E++        + DV  K+ DDL DLIV  DES
Sbjct: 465 EIKTIFGSIPDIFDVHTKIKDDLEDLIVNWDES 497


>AL450389-3|CAI23373.1|  399|Homo sapiens calsequestrin 2 (cardiac
           muscle) protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 68  DVTDKVYDDLNDLI-VEDDESDTDNVTNSVEEDTGDN 103
           ++ D + D L+  I  EDD+ D D+  NS EED  D+
Sbjct: 357 ELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDS 393


>AL449264-1|CAI14532.1|  399|Homo sapiens calsequestrin 2 (cardiac
           muscle) protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 68  DVTDKVYDDLNDLI-VEDDESDTDNVTNSVEEDTGDN 103
           ++ D + D L+  I  EDD+ D D+  NS EED  D+
Sbjct: 357 ELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDS 393


>AK023267-1|BAB14498.1|  798|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13205 fis, clone NT2RP3004534, highly similar to
           Mouse oncogene (ect2) mRNA. ).
          Length = 798

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 55  EVRPFLNKNIRVADVTDKVYDDLNDLIVEDDES 87
           E++        + DV  K+ DDL DLIV  DES
Sbjct: 466 EIKTIFGSIPDIFDVHTKIKDDLEDLIVNWDES 498


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.314    0.137    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,096,351
Number of Sequences: 224733
Number of extensions: 341138
Number of successful extensions: 1020
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1009
Number of HSP's gapped (non-prelim): 19
length of query: 104
length of database: 73,234,838
effective HSP length: 78
effective length of query: 26
effective length of database: 55,705,664
effective search space: 1448347264
effective search space used: 1448347264
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 58 (27.5 bits)