Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000748-TA|BGIBMGA000748-PA|IPR000109|TGF-beta receptor,
type I/II extracellular region
(504 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40184| Best HMM Match : PTR2 (HMM E-Value=0) 225 5e-59
SB_21872| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 4e-23
SB_56680| Best HMM Match : PTR2 (HMM E-Value=3e-06) 61 2e-09
SB_14765| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_1731| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 5e-04
SB_1733| Best HMM Match : ATP-synt_C (HMM E-Value=4.5) 37 0.044
SB_15813| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.058
SB_15812| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.54
SB_7148| Best HMM Match : MoCF_biosynth (HMM E-Value=3.6e-26) 31 2.9
SB_20016| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.8
SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.8
SB_16347| Best HMM Match : LRR_1 (HMM E-Value=0.37) 30 5.0
>SB_40184| Best HMM Match : PTR2 (HMM E-Value=0)
Length = 421
Score = 225 bits (551), Expect = 5e-59
Identities = 117/285 (41%), Positives = 168/285 (58%), Gaps = 20/285 (7%)
Query: 3 GLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRK 62
GL LIA GTGGIKPCV+AFGGDQF +EN LQ FFS FY +NLG + MIVTP LR
Sbjct: 27 GLLLIAIGTGGIKPCVSAFGGDQFSAAQENL-LQSFFSIFYFAINLGSLLSMIVTPILRG 85
Query: 63 SVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEPRDNVTLKFVSCAWYAFTKR 122
V G Y L FG PA L++ S+ +F G+ Y+ P NV L+ A R
Sbjct: 86 DVNGLGT-IAYPLAFGVPAILMITSVGLFWCGRKKYKKIPPEGNVVLQVTCAVGCAIKNR 144
Query: 123 IRSDSKELPPVDHWLDYSIEKYGPKLVADMKVVFAILYLYLPVPIFWSLFDQQGSRWTFQ 182
R+ + DHW+D++ YG K+++D+K +F +L+++LP+P+FW+LFDQQGSRWT Q
Sbjct: 145 FRNKDPSVKK-DHWMDWAENDYGAKMISDIKALFKVLFMFLPMPVFWTLFDQQGSRWTLQ 203
Query: 183 ASRLRSEIFGITLMPDQLQVMNPAMVLFMMPVCPGGVWPVFPN----LPPLHKMFIGGML 238
A + ++ MNP +L ++P+ ++P+ + PL +M G +L
Sbjct: 204 AEEMDGDL-----------AMNPVFILILIPLFEYAIYPLLSKCNLLVKPLQRMCAGMLL 252
Query: 239 AALAFVSAGILQIGIERSTLQV--PQHHHTGLILLNSLPCPVHVT 281
AA++FV A L I I++S L V P + L ++N+ PCP+ V+
Sbjct: 253 AAISFVFAAFLHIAIQKSRLHVVEPPNGFANLRVINAAPCPLKVS 297
>SB_21872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 106 bits (255), Expect = 4e-23
Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 1 MIGLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPAL 60
++ L +IA GTGGIK V+ FG DQ + + + +Q+FF+ FY +N+G F+ + +
Sbjct: 159 IVALVVIAFGTGGIKANVSPFGADQVQ-GKGPRAVQKFFNWFYWFINIGSFLSFTLIVWV 217
Query: 61 RKSVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEPRDNVTLKFVSCAWYAFT 120
++ F G+ A +++ ++F+TG+ WY ++ P +V A
Sbjct: 218 QQKYTFF-------YGYAVTAISMMIGTVVFMTGRNWYVVRPPGGSVLTDTYRVVKLAIK 270
Query: 121 KRIRSDSKELPPVDHWLDYSIEKYGPKL----VADMKVVFAILYLYLPVPIFWSLFDQQG 176
+ SD HWLD + E YG V ++K + +L ++ I+W+L+ Q
Sbjct: 271 RHWSSDKNLQSEGIHWLDRAKESYGGAFSYHRVENVKSLIRLLPVFAMFIIYWTLYSQMQ 330
Query: 177 SRWTFQASRLRSEIFGITLMPDQLQVMNPAMVLFMMPVCPGGVWPVF----PNLPPLHKM 232
+ + QA + + +GI L L + + VL ++P+ V+P+ PL ++
Sbjct: 331 TSYLIQAEYMMLD-YGIQLPAASLSIFDIVCVLLLIPLMDKVVYPLLRYCGVRFTPLRRV 389
Query: 233 FIGGMLAALAFVSAGILQIGIER 255
+G + AA + AG+++I +R
Sbjct: 390 GVGMLFAAASVAVAGLVEIERKR 412
Score = 33.9 bits (74), Expect = 0.31
Identities = 10/33 (30%), Positives = 26/33 (78%)
Query: 469 NELHLAWIVPQYLLVSVAEIMFAVSGLEFSFTQ 501
+++ + + VPQ++L+ +E+ +++GLEF+++Q
Sbjct: 432 SDMSIFYQVPQFMLIGTSEVFTSITGLEFAYSQ 464
>SB_56680| Best HMM Match : PTR2 (HMM E-Value=3e-06)
Length = 606
Score = 61.3 bits (142), Expect = 2e-09
Identities = 56/261 (21%), Positives = 116/261 (44%), Gaps = 19/261 (7%)
Query: 7 IATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRKSVMC 66
+A G G +K ++AF +QF+ + + F+ Y N+ G+ ++++ +
Sbjct: 172 VAAGEGAVKSNLSAFSAEQFQGESPSGSWKGIFTCLYWFSNVIALFGLAAVTYIQQTDLS 231
Query: 67 FGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEPRDNVTLKFVSCAWYAFTKRIRS- 125
+ Y LGFG P + ++ F+ + + PR A++KR +
Sbjct: 232 WTYG--YTLGFGIPLVSLTITAAAFLCSSKHFVINRPRGTGLRNVRMIIKQAWSKRNDTV 289
Query: 126 DSKELPPVDH------WLDYSIEKYGPKL----VADMKVVFAILYLYLPVPIFWSLFDQQ 175
+++E + WLD + +YG V ++K + L + +W ++ Q
Sbjct: 290 ETREFTSLHKAKSKMTWLDRASVQYGGTFLNSEVCEVKSLGKAFAFSLCLIPYWMIYSQL 349
Query: 176 GSRWTFQASRLRSEIFGITLMPDQ-LQVMNPAMVLFMMPVCPGGVWPVFP----NLPPLH 230
+ + Q L ++ FG+ ++P + ++ A+VL M+P+ ++PV +LP L
Sbjct: 350 YTTYILQGLHLHAD-FGVLVVPAAWMSLLEIAVVLIMLPLMEKIIYPVCIQCNFSLPLLW 408
Query: 231 KMFIGGMLAALAFVSAGILQI 251
+ G +LA + AG L++
Sbjct: 409 SVTFGMLLAVASVAMAGYLEM 429
Score = 29.1 bits (62), Expect = 8.8
Identities = 9/29 (31%), Positives = 21/29 (72%)
Query: 472 HLAWIVPQYLLVSVAEIMFAVSGLEFSFT 500
++ W +PQY L+ ++E+ +++GLE ++
Sbjct: 457 NILWQMPQYALLGMSEVFASMTGLEIVYS 485
>SB_14765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 30
Score = 48.4 bits (110), Expect = 1e-05
Identities = 15/29 (51%), Positives = 27/29 (93%)
Query: 147 KLVADMKVVFAILYLYLPVPIFWSLFDQQ 175
K+++D+K +F +L+++LP+P+FW+LFDQQ
Sbjct: 2 KMISDIKALFKVLFMFLPMPVFWTLFDQQ 30
>SB_1731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 43.2 bits (97), Expect = 5e-04
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 203 MNPAMVLFMMPVCPGGVWPVFPN----LPPLHKMFIGGMLAALAFVSAGILQIGIER--S 256
+NP +VL ++P V+P+F L L KM G +L A+AF+ LQI I+ +
Sbjct: 2 LNPILVLILIPFYDIIVYPLFERCQMPLSSLKKMTGGLLLTAVAFIICAFLQIRIQTVGA 61
Query: 257 TLQVPQHHHTGLILLNSLPCPVHV 280
+P H L +N+ PC V +
Sbjct: 62 GPSLPPAGHASLEFINAAPCDVSI 85
>SB_1733| Best HMM Match : ATP-synt_C (HMM E-Value=4.5)
Length = 168
Score = 36.7 bits (81), Expect = 0.044
Identities = 12/25 (48%), Positives = 23/25 (92%)
Query: 477 VPQYLLVSVAEIMFAVSGLEFSFTQ 501
+PQY++++ AE+MF+V+GL F+++Q
Sbjct: 44 IPQYVVITAAEVMFSVTGLGFAYSQ 68
>SB_15813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 36.3 bits (80), Expect = 0.058
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 4 LALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRKS 63
L +++ G G K ++AFG +Q ++++ ++FF+ +Y +N+ F+ ++ ++ +
Sbjct: 180 LLVLSIGEGTYKANISAFGAEQLS-SDDSKTYRQFFNWYYWAINVASFLAYMLLAYIQVN 238
Query: 64 VMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEPRDNVTLKFVSCAWYAFTKRI 123
+G + G+ +L++ ++F + Y +K N+ K C R+
Sbjct: 239 ---WG----FFYGYLISLCCILLACVLFCIPQSHYNIKPASGNILKKV--CGVIREAYRL 289
Query: 124 RSDSKELPPVDHWLDYSIEKY 144
R E L I+KY
Sbjct: 290 RKGRTENRYTIVMLQPLIDKY 310
>SB_15812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 33.1 bits (72), Expect = 0.54
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 470 ELHLAWIVPQYLLVSVAEIMFAVSGLEFSFTQ 501
+L + + +PQY L+ V+E+ +V GLEF++ +
Sbjct: 33 DLSIMYQIPQYGLIGVSEVFASVGGLEFAYRE 64
>SB_7148| Best HMM Match : MoCF_biosynth (HMM E-Value=3.6e-26)
Length = 501
Score = 30.7 bits (66), Expect = 2.9
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Query: 305 VHTLIATCPANCAGRALKRY--VVKEKLSTVAAMFMPVVIGQNSDDQIAFYFMDPNVFAK 362
V+ L+A + G LK V++E L + + D + Y M V A+
Sbjct: 283 VYPLLAPTDTSSLGACLKGAWAVIQESLKLFRLDELCISFNGGKDCTVLLYIMYAAV-AQ 341
Query: 363 SLTGKPKLKVVYIGNTGPNKNVSIAVETEKRLSDI 397
S+ PK+ +Y+ + P K VE RL ++
Sbjct: 342 SMAEVPKINALYVRHDSPFKEAENFVEETTRLYNL 376
>SB_20016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 902
Score = 30.3 bits (65), Expect = 3.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 178 RWTFQASR------LRSEIFGITLMPDQLQVMNPAMVLFMMPVCP 216
RW F+A L+ +I+ + P Q+ +MNP +L M PV P
Sbjct: 758 RWLFRAKTAKNYYDLKKKIYKSSTPPPQVDIMNPLALLGMNPVIP 802
>SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 361 AKSLTGKPKLKVVYIG--NTGPN-KNVSI-AVETEKRLSDIYYVSDAPVDQIGESAYMCL 416
A+S+ L+V+YI N G N K V I A ET K + +Y+ +D+ ++ + +C+
Sbjct: 947 AESVASNETLQVLYISYNNVGQNGKKVIISACETSKSVRHLYHENDSILNTCSKPQSVCV 1006
Query: 417 QP 418
P
Sbjct: 1007 VP 1008
>SB_16347| Best HMM Match : LRR_1 (HMM E-Value=0.37)
Length = 320
Score = 29.9 bits (64), Expect = 5.0
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 361 AKSLTGKPKLKVVYIG--NTGPN-KNVSI-AVETEKRLSDIYYVSDAPVDQIGESAYMCL 416
AKS+ L+V+YI N G N K V I A ET K + +Y+ D+ ++ + +C+
Sbjct: 212 AKSVASHETLQVLYISYNNVGQNGKKVIISACETSKSVRHLYHEYDSILNTCSKPHSVCV 271
Query: 417 QP 418
P
Sbjct: 272 VP 273
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.325 0.140 0.441
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,807,005
Number of Sequences: 59808
Number of extensions: 702727
Number of successful extensions: 1785
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1764
Number of HSP's gapped (non-prelim): 15
length of query: 504
length of database: 16,821,457
effective HSP length: 85
effective length of query: 419
effective length of database: 11,737,777
effective search space: 4918128563
effective search space used: 4918128563
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 62 (29.1 bits)
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