GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000748-TA|BGIBMGA000748-PA|IPR000109|TGF-beta receptor,
type I/II extracellular region
         (504 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.71 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.71 

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.71
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 58  PALRKSVMCFGDDTCYALGFGFPAFLVL 85
           P+L + +  FG +TC A+G     F+VL
Sbjct: 152 PSLSEFLSLFGTETCPAIGSAILIFVVL 179


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.71
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 58  PALRKSVMCFGDDTCYALGFGFPAFLVL 85
           P+L + +  FG +TC A+G     F+VL
Sbjct: 152 PSLSEFLSLFGTETCPAIGSAILIFVVL 179


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.140    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,972
Number of Sequences: 317
Number of extensions: 5432
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 2
length of query: 504
length of database: 114,650
effective HSP length: 60
effective length of query: 444
effective length of database: 95,630
effective search space: 42459720
effective search space used: 42459720
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)