BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000748-TA|BGIBMGA000748-PA|IPR000109|TGF-beta receptor, type I/II extracellular region (504 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical pr... 214 1e-55 AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity... 214 1e-55 AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide ... 204 1e-52 AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopepti... 202 5e-52 U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide tr... 194 2e-49 AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity ... 194 2e-49 U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 33 0.36 Z75529-1|CAA99782.1| 534|Caenorhabditis elegans Hypothetical pr... 31 1.9 Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 30 3.3 AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 30 3.3 AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 30 3.3 AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical ... 29 5.8 AC024852-1|AAK66027.1| 257|Caenorhabditis elegans Hypothetical ... 29 7.7 >Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical protein C06G8.2 protein. Length = 785 Score = 214 bits (523), Expect = 1e-55 Identities = 108/303 (35%), Positives = 174/303 (57%), Gaps = 25/303 (8%) Query: 1 MIGLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPAL 60 ++GL ++ GTGGIKPCV+AFGGDQF + + FFS FY ++N G + M +TP Sbjct: 134 LLGLLIVGLGTGGIKPCVSAFGGDQFPA-HYTRMISLFFSMFYFSINAGSLISMWLTPYF 192 Query: 61 RKSVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEPRDNVTLKFVSCAWYAFT 120 R S+ CFG D+CY L FG PA L++V+ ++F+ G WY+ P++N+ K + A Sbjct: 193 R-SMSCFGHDSCYPLAFGIPAILMIVATLVFMAGSFWYKKVPPKENIIFKVIGTITTALR 251 Query: 121 KRIRSDSKELPPVDHWLDYSIEKYGPKL----------------VADMKVVFAILYLYLP 164 K+ S S HWL+YS++ + L + D+K +F ++ + +P Sbjct: 252 KKASSSSTH--QRSHWLEYSLDGHDCALSTECKNLHGNCAQRRYIEDIKRLFRVIVMMIP 309 Query: 165 VPIFWSLFDQQGSRWTFQASRLRSEIFGITLMPDQLQVMNPAMVLFMMPVCPGGVWPVFP 224 VP+FW+L+DQQGS W QA + +++FG ++PDQ+ V+N ++LF +P+ V+P Sbjct: 310 VPMFWALYDQQGSTWVLQAVGMDAKVFGFEILPDQMGVLNAFLILFFIPIFQSIVYPTIE 369 Query: 225 NL----PPLHKMFIGGMLAALAFVSAGILQIGIERSTLQVPQHHHTGLILLNSLP-CPVH 279 L L KM GG+L A++F GI+Q+ + + +P + L ++N++P C + Sbjct: 370 KLGFQMTMLRKMAGGGILTAVSFFVCGIVQLFVNPTLPYIPMANEAHLTIINTIPSCDFN 429 Query: 280 VTI 282 V I Sbjct: 430 VLI 432 Score = 43.6 bits (98), Expect = 3e-04 Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 4/62 (6%) Query: 443 GGVYVLCLRERLGRLDAAVLHAPNPP---NELHLAWIVPQYLLVSVAEIMFAVSGLEFSF 499 GG Y++ + R + D+ VL N + + W +PQY++++ E++F+++GLEF++ Sbjct: 638 GGQYLITVSTR-SKNDSEVLATTESLVSYNRVSILWQIPQYVILTAGEVLFSITGLEFAY 696 Query: 500 TQ 501 T+ Sbjct: 697 TE 698 >AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity peptide transporter protein. Length = 785 Score = 214 bits (523), Expect = 1e-55 Identities = 108/303 (35%), Positives = 174/303 (57%), Gaps = 25/303 (8%) Query: 1 MIGLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPAL 60 ++GL ++ GTGGIKPCV+AFGGDQF + + FFS FY ++N G + M +TP Sbjct: 134 LLGLLIVGLGTGGIKPCVSAFGGDQFPA-HYTRMISLFFSMFYFSINAGSLISMWLTPYF 192 Query: 61 RKSVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEPRDNVTLKFVSCAWYAFT 120 R S+ CFG D+CY L FG PA L++V+ ++F+ G WY+ P++N+ K + A Sbjct: 193 R-SMSCFGHDSCYPLAFGIPAILMIVATLVFMAGSFWYKKVPPKENIIFKVIGTITTALR 251 Query: 121 KRIRSDSKELPPVDHWLDYSIEKYGPKL----------------VADMKVVFAILYLYLP 164 K+ S S HWL+YS++ + L + D+K +F ++ + +P Sbjct: 252 KKASSSSTH--QRSHWLEYSLDGHDCALSTECKNLHGNCAQRRYIEDIKRLFRVIVMMIP 309 Query: 165 VPIFWSLFDQQGSRWTFQASRLRSEIFGITLMPDQLQVMNPAMVLFMMPVCPGGVWPVFP 224 VP+FW+L+DQQGS W QA + +++FG ++PDQ+ V+N ++LF +P+ V+P Sbjct: 310 VPMFWALYDQQGSTWVLQAVGMDAKVFGFEILPDQMGVLNAFLILFFIPIFQSIVYPTIE 369 Query: 225 NL----PPLHKMFIGGMLAALAFVSAGILQIGIERSTLQVPQHHHTGLILLNSLP-CPVH 279 L L KM GG+L A++F GI+Q+ + + +P + L ++N++P C + Sbjct: 370 KLGFQMTMLRKMAGGGILTAVSFFVCGIVQLFVNPTLPYIPMANEAHLTIINTIPSCDFN 429 Query: 280 VTI 282 V I Sbjct: 430 VLI 432 Score = 43.6 bits (98), Expect = 3e-04 Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 4/62 (6%) Query: 443 GGVYVLCLRERLGRLDAAVLHAPNPP---NELHLAWIVPQYLLVSVAEIMFAVSGLEFSF 499 GG Y++ + R + D+ VL N + + W +PQY++++ E++F+++GLEF++ Sbjct: 638 GGQYLITVSTR-SKNDSEVLATTESLVSYNRVSILWQIPQYVILTAGEVLFSITGLEFAY 696 Query: 500 TQ 501 T+ Sbjct: 697 TE 698 >AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide transporter protein 3 protein. Length = 701 Score = 204 bits (498), Expect = 1e-52 Identities = 99/263 (37%), Positives = 157/263 (59%), Gaps = 7/263 (2%) Query: 3 GLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRK 62 GL +IA TG IKPCV+AF DQF +++ R Q FFS FY +N G +I+TP LR Sbjct: 119 GLFVIAFATGCIKPCVSAFAADQFTEDQKDLRSQ-FFSFFYFAINGGSLFAIIITPILRG 177 Query: 63 SVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEP-RDNVTLKFVSCAWYAFTK 121 V CFG+ C+ L FG P L+L+++I+F+ G Y+ P ++NV K V+ + + K Sbjct: 178 RVQCFGNAHCFPLAFGVPGVLMLLALILFLMGWSMYKKHPPSKENVGSKVVAVIYTSLRK 237 Query: 122 RIRSDSKELPPVDHWLDYSIEKYGPKLVADMKVVFAILYLYLPVPIFWSLFDQQGSRWTF 181 + S++ PV HWLD++ ++ K++ + + + ++ P+ FW+LFDQQGS W Sbjct: 238 MVGGASRD-KPVTHWLDHAAPEHSQKMIDSTRGLLNVAVIFCPLIFFWALFDQQGSTWVL 296 Query: 182 QASRLRSEIFGITLMPDQLQVMNPAMVLFMMPVCPGGVWPV---FPNLPPLHKMFIGGML 238 QA RL + +++P+Q+ +NP VL ++P+ G V+P + PL KM +GG+L Sbjct: 297 QARRLDGRVGHFSILPEQIHAINPVCVLILVPIFEGWVYPALRKITRVTPLRKMAVGGLL 356 Query: 239 AALAFVSAGILQIGIERSTLQVP 261 A +F AG+LQ+ + T++ P Sbjct: 357 TAFSFAIAGVLQLKV-NETMEFP 378 Score = 44.0 bits (99), Expect = 3e-04 Identities = 13/34 (38%), Positives = 28/34 (82%) Query: 468 PNELHLAWIVPQYLLVSVAEIMFAVSGLEFSFTQ 501 PN + + W +PQY+++++ E++ +V+GLEF+++Q Sbjct: 570 PNSVSILWSLPQYIIITLGEVLLSVTGLEFAYSQ 603 >AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopeptide symporter OPT-3 protein. Length = 701 Score = 202 bits (493), Expect = 5e-52 Identities = 99/263 (37%), Positives = 156/263 (59%), Gaps = 7/263 (2%) Query: 3 GLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRK 62 GL +IA TG IKPCV+AF DQF +++ R Q FFS FY +N G +I+TP LR Sbjct: 119 GLFVIAFATGCIKPCVSAFAADQFTEDQKDLRSQ-FFSFFYFAINGGSLFAIIITPILRG 177 Query: 63 SVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEP-RDNVTLKFVSCAWYAFTK 121 V CFG+ C+ L FG P L+L+++I F+ G Y+ P ++NV K V+ + + K Sbjct: 178 RVQCFGNAHCFPLAFGVPGVLMLLALIQFLMGWSMYKKHPPSKENVGSKVVAVIYTSLRK 237 Query: 122 RIRSDSKELPPVDHWLDYSIEKYGPKLVADMKVVFAILYLYLPVPIFWSLFDQQGSRWTF 181 + S++ PV HWLD++ ++ K++ + + + ++ P+ FW+LFDQQGS W Sbjct: 238 MVGGASRD-KPVTHWLDHAAPEHSQKMIDSTRGLLNVAVIFCPLIFFWALFDQQGSTWVL 296 Query: 182 QASRLRSEIFGITLMPDQLQVMNPAMVLFMMPVCPGGVWPV---FPNLPPLHKMFIGGML 238 QA RL + +++P+Q+ +NP VL ++P+ G V+P + PL KM +GG+L Sbjct: 297 QARRLDGRVGHFSILPEQIHAINPVCVLILVPIFEGWVYPALRKITRVTPLRKMAVGGLL 356 Query: 239 AALAFVSAGILQIGIERSTLQVP 261 A +F AG+LQ+ + T++ P Sbjct: 357 TAFSFAIAGVLQLKV-NETMEFP 378 Score = 44.0 bits (99), Expect = 3e-04 Identities = 13/34 (38%), Positives = 28/34 (82%) Query: 468 PNELHLAWIVPQYLLVSVAEIMFAVSGLEFSFTQ 501 PN + + W +PQY+++++ E++ +V+GLEF+++Q Sbjct: 570 PNSVSILWSLPQYIIITLGEVLLSVTGLEFAYSQ 603 >U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide transporter protein 2 protein. Length = 835 Score = 194 bits (472), Expect = 2e-49 Identities = 106/306 (34%), Positives = 166/306 (54%), Gaps = 31/306 (10%) Query: 3 GLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRK 62 GL +IA GTGGIKPCV+AFGGDQF L +E L FFS FY ++N G + ++P R Sbjct: 150 GLLIIAFGTGGIKPCVSAFGGDQFELGQERM-LSLFFSMFYFSINAGSMISTFISPIFR- 207 Query: 63 SVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEPRDNVTLKFVSCAWYAFTKR 122 S C G D+CY + FG PA L++V+ ++F+ G WY+ P+DNV + + A + Sbjct: 208 SQPCLGQDSCYPMAFGIPAILMIVATLVFMGGSFWYKKNPPKDNVFGEVSRLMFRAVGNK 267 Query: 123 IRSDSKELPPVDHW----------------LDYSIEKYG------PKLVADMKVVFAILY 160 ++S S P +HW L+ EK K + D++ + +L Sbjct: 268 MKSGS---TPKEHWLLHYLTTHDCALDAKCLELQAEKRNKNLCQKKKFIDDVRSLLRVLV 324 Query: 161 LYLPVPIFWSLFDQQGSRWTFQASRLRSEIFG-ITLMPDQLQVMNPAMVLFMMPVCPGGV 219 ++LPVP+FW+L+DQQGS W QA ++ + + L+PDQ+Q +N ++L +P+ + Sbjct: 325 MFLPVPMFWALYDQQGSVWLIQAIQMDCRLSDTLLLLPDQMQTLNAVLILLFIPLFQVII 384 Query: 220 WPVFP---NLPPLHKMFIGGMLAALAFVSAGILQIGIERSTLQVPQHHHTGLILLNSLPC 276 +PV L PL KM GG+LA+LAF+ G +Q+ + + +P+ + N Sbjct: 385 YPVAAKCVRLTPLRKMVTGGLLASLAFLITGFVQLQVNTTLPTLPEEGEASISFWNQFET 444 Query: 277 PVHVTI 282 +T+ Sbjct: 445 DCTITV 450 Score = 40.3 bits (90), Expect = 0.003 Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 5/64 (7%) Query: 440 LRAGGVYVLCLRERLGRLDAAVLHAPN--PPNELHLAWIVPQYLLVSVAEIMFAVSGLEF 497 ++ GGV++ L G + +H N + + W +PQ ++++ AEI+F+++G EF Sbjct: 665 VKQGGVFIYALT---GTYENPKIHELQIVQSNSVSILWQIPQIVVITAAEILFSITGYEF 721 Query: 498 SFTQ 501 +++Q Sbjct: 722 AYSQ 725 >AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity peptide transporter protein. Length = 796 Score = 194 bits (472), Expect = 2e-49 Identities = 106/306 (34%), Positives = 166/306 (54%), Gaps = 31/306 (10%) Query: 3 GLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRK 62 GL +IA GTGGIKPCV+AFGGDQF L +E L FFS FY ++N G + ++P R Sbjct: 111 GLLIIAFGTGGIKPCVSAFGGDQFELGQERM-LSLFFSMFYFSINAGSMISTFISPIFR- 168 Query: 63 SVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEPRDNVTLKFVSCAWYAFTKR 122 S C G D+CY + FG PA L++V+ ++F+ G WY+ P+DNV + + A + Sbjct: 169 SQPCLGQDSCYPMAFGIPAILMIVATLVFMGGSFWYKKNPPKDNVFGEVSRLMFRAVGNK 228 Query: 123 IRSDSKELPPVDHW----------------LDYSIEKYG------PKLVADMKVVFAILY 160 ++S S P +HW L+ EK K + D++ + +L Sbjct: 229 MKSGS---TPKEHWLLHYLTTHDCALDAKCLELQAEKRNKNLCQKKKFIDDVRSLLRVLV 285 Query: 161 LYLPVPIFWSLFDQQGSRWTFQASRLRSEIFG-ITLMPDQLQVMNPAMVLFMMPVCPGGV 219 ++LPVP+FW+L+DQQGS W QA ++ + + L+PDQ+Q +N ++L +P+ + Sbjct: 286 MFLPVPMFWALYDQQGSVWLIQAIQMDCRLSDTLLLLPDQMQTLNAVLILLFIPLFQVII 345 Query: 220 WPVFP---NLPPLHKMFIGGMLAALAFVSAGILQIGIERSTLQVPQHHHTGLILLNSLPC 276 +PV L PL KM GG+LA+LAF+ G +Q+ + + +P+ + N Sbjct: 346 YPVAAKCVRLTPLRKMVTGGLLASLAFLITGFVQLQVNTTLPTLPEEGEASISFWNQFET 405 Query: 277 PVHVTI 282 +T+ Sbjct: 406 DCTITV 411 Score = 40.3 bits (90), Expect = 0.003 Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 5/64 (7%) Query: 440 LRAGGVYVLCLRERLGRLDAAVLHAPN--PPNELHLAWIVPQYLLVSVAEIMFAVSGLEF 497 ++ GGV++ L G + +H N + + W +PQ ++++ AEI+F+++G EF Sbjct: 626 VKQGGVFIYALT---GTYENPKIHELQIVQSNSVSILWQIPQIVVITAAEILFSITGYEF 682 Query: 498 SFTQ 501 +++Q Sbjct: 683 AYSQ 686 >U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical protein W03A5.1 protein. Length = 832 Score = 33.5 bits (73), Expect = 0.36 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 11/66 (16%) Query: 374 YIGNTGPNK---NVSIAVETEKRLSDIYYVS----DAPVDQIGESAYMCLQPGKFKWRAS 426 Y+ N GP K N+ + ET R++ ++YV D DQIG+ A+ ++ GKF+ + Sbjct: 489 YMKNQGPQKKWENMPLH-ETSIRINSLFYVDGKKIDCGTDQIGKGAFGTVKKGKFR---N 544 Query: 427 SAGDEV 432 S G+ V Sbjct: 545 SLGESV 550 >Z75529-1|CAA99782.1| 534|Caenorhabditis elegans Hypothetical protein C44H9.1 protein. Length = 534 Score = 31.1 bits (67), Expect = 1.9 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 4/74 (5%) Query: 351 AFYFMDPNVFAKSLTGKPKL-KVVYIGNTGPNKNVSIAVETEKRLSDIYYVSDAPV-DQI 408 A+YF++ N + + P L K V+IG N N V+ EK D+ + V Sbjct: 249 AYYFINSNQYLDYPS--PTLPKTVFIGGMQVNTNKHGKVKLEKEWDDLLNLRKQNVLVSF 306 Query: 409 GESAYMCLQPGKFK 422 G +A+ C P +FK Sbjct: 307 GSNAFSCDMPDEFK 320 >Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical protein Y76A2B.1 protein. Length = 1057 Score = 30.3 bits (65), Expect = 3.3 Identities = 12/39 (30%), Positives = 20/39 (51%) Query: 167 IFWSLFDQQGSRWTFQASRLRSEIFGITLMPDQLQVMNP 205 + W L D+ + TF+ R++ ++F L PD L P Sbjct: 884 VCWRLSDKNLEKITFRVPRIKKDVFQDDLFPDSLVTWEP 922 >AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical protein Y76A2B.1 protein. Length = 1057 Score = 30.3 bits (65), Expect = 3.3 Identities = 12/39 (30%), Positives = 20/39 (51%) Query: 167 IFWSLFDQQGSRWTFQASRLRSEIFGITLMPDQLQVMNP 205 + W L D+ + TF+ R++ ++F L PD L P Sbjct: 884 VCWRLSDKNLEKITFRVPRIKKDVFQDDLFPDSLVTWEP 922 >AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. Length = 1057 Score = 30.3 bits (65), Expect = 3.3 Identities = 12/39 (30%), Positives = 20/39 (51%) Query: 167 IFWSLFDQQGSRWTFQASRLRSEIFGITLMPDQLQVMNP 205 + W L D+ + TF+ R++ ++F L PD L P Sbjct: 884 VCWRLSDKNLEKITFRVPRIKKDVFQDDLFPDSLVTWEP 922 >AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical protein Y39A1B.2 protein. Length = 1003 Score = 29.5 bits (63), Expect = 5.8 Identities = 16/64 (25%), Positives = 24/64 (37%) Query: 5 ALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRKSV 64 AL A G + + G F E+ + F T + LG G+++ P L Sbjct: 799 ALYAVGAPILMSATSTIIGVSFMASAESYVFRSFLKTIMLVILLGALHGLVILPVLLSMF 858 Query: 65 MCFG 68 C G Sbjct: 859 YCGG 862 >AC024852-1|AAK66027.1| 257|Caenorhabditis elegans Hypothetical protein Y71F9AM.6 protein. Length = 257 Score = 29.1 bits (62), Expect = 7.7 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 340 VVIGQNSDDQIAFYFMDP---NVFAKSLTGKPKLKVVYIGNTGPNKNVSIAVETEKR 393 + IG + D +AF+F+ P NV + TGKP ++ N G V ET R Sbjct: 41 LTIGASPDAGLAFHFVQPSDANVVREFYTGKPVKYLIGFQNKGEKDFVVKYAETSFR 97 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.325 0.140 0.441 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,621,779 Number of Sequences: 27539 Number of extensions: 550043 Number of successful extensions: 1463 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 1423 Number of HSP's gapped (non-prelim): 23 length of query: 504 length of database: 12,573,161 effective HSP length: 84 effective length of query: 420 effective length of database: 10,259,885 effective search space: 4309151700 effective search space used: 4309151700 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 62 (29.1 bits)
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