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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000748-TA|BGIBMGA000748-PA|IPR000109|TGF-beta receptor,
type I/II extracellular region
         (504 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70306-2|CAA94323.2|  785|Caenorhabditis elegans Hypothetical pr...   214   1e-55
AF000417-1|AAC39118.1|  785|Caenorhabditis elegans high-affinity...   214   1e-55
AF003146-1|AAB54202.1|  701|Caenorhabditis elegans Oligopeptide ...   204   1e-52
AF142441-1|AAF66614.1|  701|Caenorhabditis elegans H+/oligopepti...   202   5e-52
U39666-2|AAA80411.2|  835|Caenorhabditis elegans Oligopeptide tr...   194   2e-49
AF000418-1|AAC39119.1|  796|Caenorhabditis elegans low-affinity ...   194   2e-49
U00058-2|AAL02528.2|  832|Caenorhabditis elegans Hypothetical pr...    33   0.36 
Z75529-1|CAA99782.1|  534|Caenorhabditis elegans Hypothetical pr...    31   1.9  
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr...    30   3.3  
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ...    30   3.3  
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.      30   3.3  
AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical ...    29   5.8  
AC024852-1|AAK66027.1|  257|Caenorhabditis elegans Hypothetical ...    29   7.7  

>Z70306-2|CAA94323.2|  785|Caenorhabditis elegans Hypothetical
           protein C06G8.2 protein.
          Length = 785

 Score =  214 bits (523), Expect = 1e-55
 Identities = 108/303 (35%), Positives = 174/303 (57%), Gaps = 25/303 (8%)

Query: 1   MIGLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPAL 60
           ++GL ++  GTGGIKPCV+AFGGDQF      + +  FFS FY ++N G  + M +TP  
Sbjct: 134 LLGLLIVGLGTGGIKPCVSAFGGDQFPA-HYTRMISLFFSMFYFSINAGSLISMWLTPYF 192

Query: 61  RKSVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEPRDNVTLKFVSCAWYAFT 120
           R S+ CFG D+CY L FG PA L++V+ ++F+ G  WY+   P++N+  K +     A  
Sbjct: 193 R-SMSCFGHDSCYPLAFGIPAILMIVATLVFMAGSFWYKKVPPKENIIFKVIGTITTALR 251

Query: 121 KRIRSDSKELPPVDHWLDYSIEKYGPKL----------------VADMKVVFAILYLYLP 164
           K+  S S       HWL+YS++ +   L                + D+K +F ++ + +P
Sbjct: 252 KKASSSSTH--QRSHWLEYSLDGHDCALSTECKNLHGNCAQRRYIEDIKRLFRVIVMMIP 309

Query: 165 VPIFWSLFDQQGSRWTFQASRLRSEIFGITLMPDQLQVMNPAMVLFMMPVCPGGVWPVFP 224
           VP+FW+L+DQQGS W  QA  + +++FG  ++PDQ+ V+N  ++LF +P+    V+P   
Sbjct: 310 VPMFWALYDQQGSTWVLQAVGMDAKVFGFEILPDQMGVLNAFLILFFIPIFQSIVYPTIE 369

Query: 225 NL----PPLHKMFIGGMLAALAFVSAGILQIGIERSTLQVPQHHHTGLILLNSLP-CPVH 279
            L      L KM  GG+L A++F   GI+Q+ +  +   +P  +   L ++N++P C  +
Sbjct: 370 KLGFQMTMLRKMAGGGILTAVSFFVCGIVQLFVNPTLPYIPMANEAHLTIINTIPSCDFN 429

Query: 280 VTI 282
           V I
Sbjct: 430 VLI 432



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 4/62 (6%)

Query: 443 GGVYVLCLRERLGRLDAAVLHAPNPP---NELHLAWIVPQYLLVSVAEIMFAVSGLEFSF 499
           GG Y++ +  R  + D+ VL         N + + W +PQY++++  E++F+++GLEF++
Sbjct: 638 GGQYLITVSTR-SKNDSEVLATTESLVSYNRVSILWQIPQYVILTAGEVLFSITGLEFAY 696

Query: 500 TQ 501
           T+
Sbjct: 697 TE 698


>AF000417-1|AAC39118.1|  785|Caenorhabditis elegans high-affinity
           peptide transporter protein.
          Length = 785

 Score =  214 bits (523), Expect = 1e-55
 Identities = 108/303 (35%), Positives = 174/303 (57%), Gaps = 25/303 (8%)

Query: 1   MIGLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPAL 60
           ++GL ++  GTGGIKPCV+AFGGDQF      + +  FFS FY ++N G  + M +TP  
Sbjct: 134 LLGLLIVGLGTGGIKPCVSAFGGDQFPA-HYTRMISLFFSMFYFSINAGSLISMWLTPYF 192

Query: 61  RKSVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEPRDNVTLKFVSCAWYAFT 120
           R S+ CFG D+CY L FG PA L++V+ ++F+ G  WY+   P++N+  K +     A  
Sbjct: 193 R-SMSCFGHDSCYPLAFGIPAILMIVATLVFMAGSFWYKKVPPKENIIFKVIGTITTALR 251

Query: 121 KRIRSDSKELPPVDHWLDYSIEKYGPKL----------------VADMKVVFAILYLYLP 164
           K+  S S       HWL+YS++ +   L                + D+K +F ++ + +P
Sbjct: 252 KKASSSSTH--QRSHWLEYSLDGHDCALSTECKNLHGNCAQRRYIEDIKRLFRVIVMMIP 309

Query: 165 VPIFWSLFDQQGSRWTFQASRLRSEIFGITLMPDQLQVMNPAMVLFMMPVCPGGVWPVFP 224
           VP+FW+L+DQQGS W  QA  + +++FG  ++PDQ+ V+N  ++LF +P+    V+P   
Sbjct: 310 VPMFWALYDQQGSTWVLQAVGMDAKVFGFEILPDQMGVLNAFLILFFIPIFQSIVYPTIE 369

Query: 225 NL----PPLHKMFIGGMLAALAFVSAGILQIGIERSTLQVPQHHHTGLILLNSLP-CPVH 279
            L      L KM  GG+L A++F   GI+Q+ +  +   +P  +   L ++N++P C  +
Sbjct: 370 KLGFQMTMLRKMAGGGILTAVSFFVCGIVQLFVNPTLPYIPMANEAHLTIINTIPSCDFN 429

Query: 280 VTI 282
           V I
Sbjct: 430 VLI 432



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 4/62 (6%)

Query: 443 GGVYVLCLRERLGRLDAAVLHAPNPP---NELHLAWIVPQYLLVSVAEIMFAVSGLEFSF 499
           GG Y++ +  R  + D+ VL         N + + W +PQY++++  E++F+++GLEF++
Sbjct: 638 GGQYLITVSTR-SKNDSEVLATTESLVSYNRVSILWQIPQYVILTAGEVLFSITGLEFAY 696

Query: 500 TQ 501
           T+
Sbjct: 697 TE 698


>AF003146-1|AAB54202.1|  701|Caenorhabditis elegans Oligopeptide
           transporter protein 3 protein.
          Length = 701

 Score =  204 bits (498), Expect = 1e-52
 Identities = 99/263 (37%), Positives = 157/263 (59%), Gaps = 7/263 (2%)

Query: 3   GLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRK 62
           GL +IA  TG IKPCV+AF  DQF   +++ R Q FFS FY  +N G    +I+TP LR 
Sbjct: 119 GLFVIAFATGCIKPCVSAFAADQFTEDQKDLRSQ-FFSFFYFAINGGSLFAIIITPILRG 177

Query: 63  SVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEP-RDNVTLKFVSCAWYAFTK 121
            V CFG+  C+ L FG P  L+L+++I+F+ G   Y+   P ++NV  K V+  + +  K
Sbjct: 178 RVQCFGNAHCFPLAFGVPGVLMLLALILFLMGWSMYKKHPPSKENVGSKVVAVIYTSLRK 237

Query: 122 RIRSDSKELPPVDHWLDYSIEKYGPKLVADMKVVFAILYLYLPVPIFWSLFDQQGSRWTF 181
            +   S++  PV HWLD++  ++  K++   + +  +  ++ P+  FW+LFDQQGS W  
Sbjct: 238 MVGGASRD-KPVTHWLDHAAPEHSQKMIDSTRGLLNVAVIFCPLIFFWALFDQQGSTWVL 296

Query: 182 QASRLRSEIFGITLMPDQLQVMNPAMVLFMMPVCPGGVWPV---FPNLPPLHKMFIGGML 238
           QA RL   +   +++P+Q+  +NP  VL ++P+  G V+P       + PL KM +GG+L
Sbjct: 297 QARRLDGRVGHFSILPEQIHAINPVCVLILVPIFEGWVYPALRKITRVTPLRKMAVGGLL 356

Query: 239 AALAFVSAGILQIGIERSTLQVP 261
            A +F  AG+LQ+ +   T++ P
Sbjct: 357 TAFSFAIAGVLQLKV-NETMEFP 378



 Score = 44.0 bits (99), Expect = 3e-04
 Identities = 13/34 (38%), Positives = 28/34 (82%)

Query: 468 PNELHLAWIVPQYLLVSVAEIMFAVSGLEFSFTQ 501
           PN + + W +PQY+++++ E++ +V+GLEF+++Q
Sbjct: 570 PNSVSILWSLPQYIIITLGEVLLSVTGLEFAYSQ 603


>AF142441-1|AAF66614.1|  701|Caenorhabditis elegans H+/oligopeptide
           symporter OPT-3 protein.
          Length = 701

 Score =  202 bits (493), Expect = 5e-52
 Identities = 99/263 (37%), Positives = 156/263 (59%), Gaps = 7/263 (2%)

Query: 3   GLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRK 62
           GL +IA  TG IKPCV+AF  DQF   +++ R Q FFS FY  +N G    +I+TP LR 
Sbjct: 119 GLFVIAFATGCIKPCVSAFAADQFTEDQKDLRSQ-FFSFFYFAINGGSLFAIIITPILRG 177

Query: 63  SVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEP-RDNVTLKFVSCAWYAFTK 121
            V CFG+  C+ L FG P  L+L+++I F+ G   Y+   P ++NV  K V+  + +  K
Sbjct: 178 RVQCFGNAHCFPLAFGVPGVLMLLALIQFLMGWSMYKKHPPSKENVGSKVVAVIYTSLRK 237

Query: 122 RIRSDSKELPPVDHWLDYSIEKYGPKLVADMKVVFAILYLYLPVPIFWSLFDQQGSRWTF 181
            +   S++  PV HWLD++  ++  K++   + +  +  ++ P+  FW+LFDQQGS W  
Sbjct: 238 MVGGASRD-KPVTHWLDHAAPEHSQKMIDSTRGLLNVAVIFCPLIFFWALFDQQGSTWVL 296

Query: 182 QASRLRSEIFGITLMPDQLQVMNPAMVLFMMPVCPGGVWPV---FPNLPPLHKMFIGGML 238
           QA RL   +   +++P+Q+  +NP  VL ++P+  G V+P       + PL KM +GG+L
Sbjct: 297 QARRLDGRVGHFSILPEQIHAINPVCVLILVPIFEGWVYPALRKITRVTPLRKMAVGGLL 356

Query: 239 AALAFVSAGILQIGIERSTLQVP 261
            A +F  AG+LQ+ +   T++ P
Sbjct: 357 TAFSFAIAGVLQLKV-NETMEFP 378



 Score = 44.0 bits (99), Expect = 3e-04
 Identities = 13/34 (38%), Positives = 28/34 (82%)

Query: 468 PNELHLAWIVPQYLLVSVAEIMFAVSGLEFSFTQ 501
           PN + + W +PQY+++++ E++ +V+GLEF+++Q
Sbjct: 570 PNSVSILWSLPQYIIITLGEVLLSVTGLEFAYSQ 603


>U39666-2|AAA80411.2|  835|Caenorhabditis elegans Oligopeptide
           transporter protein 2 protein.
          Length = 835

 Score =  194 bits (472), Expect = 2e-49
 Identities = 106/306 (34%), Positives = 166/306 (54%), Gaps = 31/306 (10%)

Query: 3   GLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRK 62
           GL +IA GTGGIKPCV+AFGGDQF L +E   L  FFS FY ++N G  +   ++P  R 
Sbjct: 150 GLLIIAFGTGGIKPCVSAFGGDQFELGQERM-LSLFFSMFYFSINAGSMISTFISPIFR- 207

Query: 63  SVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEPRDNVTLKFVSCAWYAFTKR 122
           S  C G D+CY + FG PA L++V+ ++F+ G  WY+   P+DNV  +     + A   +
Sbjct: 208 SQPCLGQDSCYPMAFGIPAILMIVATLVFMGGSFWYKKNPPKDNVFGEVSRLMFRAVGNK 267

Query: 123 IRSDSKELPPVDHW----------------LDYSIEKYG------PKLVADMKVVFAILY 160
           ++S S    P +HW                L+   EK         K + D++ +  +L 
Sbjct: 268 MKSGS---TPKEHWLLHYLTTHDCALDAKCLELQAEKRNKNLCQKKKFIDDVRSLLRVLV 324

Query: 161 LYLPVPIFWSLFDQQGSRWTFQASRLRSEIFG-ITLMPDQLQVMNPAMVLFMMPVCPGGV 219
           ++LPVP+FW+L+DQQGS W  QA ++   +   + L+PDQ+Q +N  ++L  +P+    +
Sbjct: 325 MFLPVPMFWALYDQQGSVWLIQAIQMDCRLSDTLLLLPDQMQTLNAVLILLFIPLFQVII 384

Query: 220 WPVFP---NLPPLHKMFIGGMLAALAFVSAGILQIGIERSTLQVPQHHHTGLILLNSLPC 276
           +PV      L PL KM  GG+LA+LAF+  G +Q+ +  +   +P+     +   N    
Sbjct: 385 YPVAAKCVRLTPLRKMVTGGLLASLAFLITGFVQLQVNTTLPTLPEEGEASISFWNQFET 444

Query: 277 PVHVTI 282
              +T+
Sbjct: 445 DCTITV 450



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 5/64 (7%)

Query: 440 LRAGGVYVLCLRERLGRLDAAVLHAPN--PPNELHLAWIVPQYLLVSVAEIMFAVSGLEF 497
           ++ GGV++  L    G  +   +H       N + + W +PQ ++++ AEI+F+++G EF
Sbjct: 665 VKQGGVFIYALT---GTYENPKIHELQIVQSNSVSILWQIPQIVVITAAEILFSITGYEF 721

Query: 498 SFTQ 501
           +++Q
Sbjct: 722 AYSQ 725


>AF000418-1|AAC39119.1|  796|Caenorhabditis elegans low-affinity
           peptide transporter protein.
          Length = 796

 Score =  194 bits (472), Expect = 2e-49
 Identities = 106/306 (34%), Positives = 166/306 (54%), Gaps = 31/306 (10%)

Query: 3   GLALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRK 62
           GL +IA GTGGIKPCV+AFGGDQF L +E   L  FFS FY ++N G  +   ++P  R 
Sbjct: 111 GLLIIAFGTGGIKPCVSAFGGDQFELGQERM-LSLFFSMFYFSINAGSMISTFISPIFR- 168

Query: 63  SVMCFGDDTCYALGFGFPAFLVLVSIIIFVTGKPWYRMKEPRDNVTLKFVSCAWYAFTKR 122
           S  C G D+CY + FG PA L++V+ ++F+ G  WY+   P+DNV  +     + A   +
Sbjct: 169 SQPCLGQDSCYPMAFGIPAILMIVATLVFMGGSFWYKKNPPKDNVFGEVSRLMFRAVGNK 228

Query: 123 IRSDSKELPPVDHW----------------LDYSIEKYG------PKLVADMKVVFAILY 160
           ++S S    P +HW                L+   EK         K + D++ +  +L 
Sbjct: 229 MKSGS---TPKEHWLLHYLTTHDCALDAKCLELQAEKRNKNLCQKKKFIDDVRSLLRVLV 285

Query: 161 LYLPVPIFWSLFDQQGSRWTFQASRLRSEIFG-ITLMPDQLQVMNPAMVLFMMPVCPGGV 219
           ++LPVP+FW+L+DQQGS W  QA ++   +   + L+PDQ+Q +N  ++L  +P+    +
Sbjct: 286 MFLPVPMFWALYDQQGSVWLIQAIQMDCRLSDTLLLLPDQMQTLNAVLILLFIPLFQVII 345

Query: 220 WPVFP---NLPPLHKMFIGGMLAALAFVSAGILQIGIERSTLQVPQHHHTGLILLNSLPC 276
           +PV      L PL KM  GG+LA+LAF+  G +Q+ +  +   +P+     +   N    
Sbjct: 346 YPVAAKCVRLTPLRKMVTGGLLASLAFLITGFVQLQVNTTLPTLPEEGEASISFWNQFET 405

Query: 277 PVHVTI 282
              +T+
Sbjct: 406 DCTITV 411



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 5/64 (7%)

Query: 440 LRAGGVYVLCLRERLGRLDAAVLHAPN--PPNELHLAWIVPQYLLVSVAEIMFAVSGLEF 497
           ++ GGV++  L    G  +   +H       N + + W +PQ ++++ AEI+F+++G EF
Sbjct: 626 VKQGGVFIYALT---GTYENPKIHELQIVQSNSVSILWQIPQIVVITAAEILFSITGYEF 682

Query: 498 SFTQ 501
           +++Q
Sbjct: 683 AYSQ 686


>U00058-2|AAL02528.2|  832|Caenorhabditis elegans Hypothetical
           protein W03A5.1 protein.
          Length = 832

 Score = 33.5 bits (73), Expect = 0.36
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 11/66 (16%)

Query: 374 YIGNTGPNK---NVSIAVETEKRLSDIYYVS----DAPVDQIGESAYMCLQPGKFKWRAS 426
           Y+ N GP K   N+ +  ET  R++ ++YV     D   DQIG+ A+  ++ GKF+   +
Sbjct: 489 YMKNQGPQKKWENMPLH-ETSIRINSLFYVDGKKIDCGTDQIGKGAFGTVKKGKFR---N 544

Query: 427 SAGDEV 432
           S G+ V
Sbjct: 545 SLGESV 550


>Z75529-1|CAA99782.1|  534|Caenorhabditis elegans Hypothetical
           protein C44H9.1 protein.
          Length = 534

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 351 AFYFMDPNVFAKSLTGKPKL-KVVYIGNTGPNKNVSIAVETEKRLSDIYYVSDAPV-DQI 408
           A+YF++ N +    +  P L K V+IG    N N    V+ EK   D+  +    V    
Sbjct: 249 AYYFINSNQYLDYPS--PTLPKTVFIGGMQVNTNKHGKVKLEKEWDDLLNLRKQNVLVSF 306

Query: 409 GESAYMCLQPGKFK 422
           G +A+ C  P +FK
Sbjct: 307 GSNAFSCDMPDEFK 320


>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 167 IFWSLFDQQGSRWTFQASRLRSEIFGITLMPDQLQVMNP 205
           + W L D+   + TF+  R++ ++F   L PD L    P
Sbjct: 884 VCWRLSDKNLEKITFRVPRIKKDVFQDDLFPDSLVTWEP 922


>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 167 IFWSLFDQQGSRWTFQASRLRSEIFGITLMPDQLQVMNP 205
           + W L D+   + TF+  R++ ++F   L PD L    P
Sbjct: 884 VCWRLSDKNLEKITFRVPRIKKDVFQDDLFPDSLVTWEP 922


>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
          Length = 1057

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 167 IFWSLFDQQGSRWTFQASRLRSEIFGITLMPDQLQVMNP 205
           + W L D+   + TF+  R++ ++F   L PD L    P
Sbjct: 884 VCWRLSDKNLEKITFRVPRIKKDVFQDDLFPDSLVTWEP 922


>AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical
           protein Y39A1B.2 protein.
          Length = 1003

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 16/64 (25%), Positives = 24/64 (37%)

Query: 5   ALIATGTGGIKPCVAAFGGDQFRLPEENQRLQRFFSTFYCTVNLGGFMGMIVTPALRKSV 64
           AL A G   +    +   G  F    E+   + F  T    + LG   G+++ P L    
Sbjct: 799 ALYAVGAPILMSATSTIIGVSFMASAESYVFRSFLKTIMLVILLGALHGLVILPVLLSMF 858

Query: 65  MCFG 68
            C G
Sbjct: 859 YCGG 862


>AC024852-1|AAK66027.1|  257|Caenorhabditis elegans Hypothetical
           protein Y71F9AM.6 protein.
          Length = 257

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 340 VVIGQNSDDQIAFYFMDP---NVFAKSLTGKPKLKVVYIGNTGPNKNVSIAVETEKR 393
           + IG + D  +AF+F+ P   NV  +  TGKP   ++   N G    V    ET  R
Sbjct: 41  LTIGASPDAGLAFHFVQPSDANVVREFYTGKPVKYLIGFQNKGEKDFVVKYAETSFR 97


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.325    0.140    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,621,779
Number of Sequences: 27539
Number of extensions: 550043
Number of successful extensions: 1463
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1423
Number of HSP's gapped (non-prelim): 23
length of query: 504
length of database: 12,573,161
effective HSP length: 84
effective length of query: 420
effective length of database: 10,259,885
effective search space: 4309151700
effective search space used: 4309151700
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 62 (29.1 bits)

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