Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000747-TA|BGIBMGA000747-PA|undefined
(72 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 25 1.6
SPBC887.14c |pfh1|pif1|pif1 helicase homolog Pfh1|Schizosaccharo... 25 1.6
SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyc... 23 3.7
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 23 4.9
SPCC306.07c |||U3 snoRNP-associated protein Cic1/Utp30 family|Sc... 23 6.5
SPCC63.07 |||tRNA guanylyltransferase |Schizosaccharomyces pombe... 23 6.5
SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyce... 23 6.5
SPCC553.07c |mug40||DinB translesion DNA repair polymerase|Schiz... 23 6.5
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 22 8.6
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 22 8.6
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 22 8.6
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 24.6 bits (51), Expect = 1.6
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 20 ILEEVDEETSVIKKNKVWVRKWIDRSDKLGATKCLLKE 57
+L++V EE I+K + V +D +K+ T+ ++KE
Sbjct: 341 VLQKVREEQLRIRKGDIDVPLSLDLMEKMTYTRAVVKE 378
>SPBC887.14c |pfh1|pif1|pif1 helicase homolog
Pfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 805
Score = 24.6 bits (51), Expect = 1.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 22 EEVDEETSVIKKNKVWVRKWI 42
E VD S IKKNK V +W+
Sbjct: 389 ESVDLLVSKIKKNKKCVNRWL 409
>SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 23.4 bits (48), Expect = 3.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 28 TSVIKKNKVWVRKWID 43
T +I KN+ +R WID
Sbjct: 301 TQIITKNRTSIRLWID 316
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 23.0 bits (47), Expect = 4.9
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 18 MAILEEVDEETSVIKKNKVWVRKWIDRSD 46
++I+++ V +K K+W +W D SD
Sbjct: 773 VSIIQQRIIPNPVSQKQKIWRDRWNDLSD 801
>SPCC306.07c |||U3 snoRNP-associated protein Cic1/Utp30
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 284
Score = 22.6 bits (46), Expect = 6.5
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 11 KLIKLIVMAILEEVDEETSVIKKNKVWVR 39
KL++ + A+L+ + I+K KV+++
Sbjct: 20 KLLEKTIRALLQHIRSSDKPIEKEKVYIQ 48
>SPCC63.07 |||tRNA guanylyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 22.6 bits (46), Expect = 6.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 27 ETSVIKKNKVWVRKWIDR 44
E + KK +W+R+ ID+
Sbjct: 201 EPEIYKKGSIWIREPIDQ 218
>SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 388
Score = 22.6 bits (46), Expect = 6.5
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 4/25 (16%)
Query: 34 NKVWVRKWIDRSDK----LGATKCL 54
N+VW RK+ + DK ATKCL
Sbjct: 351 NEVWHRKYFEWKDKDEGFEEATKCL 375
>SPCC553.07c |mug40||DinB translesion DNA repair
polymerase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 22.6 bits (46), Expect = 6.5
Identities = 9/39 (23%), Positives = 22/39 (56%)
Query: 13 IKLIVMAILEEVDEETSVIKKNKVWVRKWIDRSDKLGAT 51
++L + + EV++ S ++ +K + R+W R + + T
Sbjct: 80 LRLRIEKVQVEVEKYQSKLRFDKAFQREWTIRQESVDTT 118
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 22.2 bits (45), Expect = 8.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 21 LEEVDEETSVIKKNKVWVRKWIDRSDKLGATK 52
+EEVD+E+ +K V++ +++L TK
Sbjct: 238 IEEVDDESEKKEKKTKKVKETTTETEELNKTK 269
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 22.2 bits (45), Expect = 8.6
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 1 MNRLQRNRVNKLIKLIVMAILEEVDEETSVIKKNKVWVRKWI 42
+NR L ++ ++E DEE IKKN R WI
Sbjct: 145 VNRNSDPSEKSTFSLNILKAIKETDEE---IKKNPGKARLWI 183
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 22.2 bits (45), Expect = 8.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 54 LLKELALEEIPKNTSIGLV 72
LL A EEIP+NT G V
Sbjct: 566 LLNGSASEEIPQNTESGQV 584
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 315,266
Number of Sequences: 5004
Number of extensions: 9982
Number of successful extensions: 36
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 11
length of query: 72
length of database: 2,362,478
effective HSP length: 52
effective length of query: 20
effective length of database: 2,102,270
effective search space: 42045400
effective search space used: 42045400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)
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