Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000747-TA|BGIBMGA000747-PA|undefined
(72 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0238 + 16730444-16730448,16730484-16730586,16732043-167320... 27 1.4
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 27 2.4
05_04_0288 + 19839597-19839821,19841882-19842107,19842494-198425... 26 3.2
01_06_1149 - 34901338-34901466,34901707-34901838,34901940-349022... 26 3.2
06_03_0671 + 23348958-23349101,23349475-23349834,23350003-233503... 25 5.6
01_01_0531 - 3892738-3892757,3893083-3893111,3893330-3893355,389... 25 5.6
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 25 7.5
10_08_0173 + 15414628-15414890,15415001-15415074,15416322-154164... 25 7.5
06_03_0568 + 22351552-22351679,22352176-22352227,22353044-223531... 25 7.5
05_06_0091 + 25462802-25462953,25464937-25465018 25 7.5
05_05_0051 + 21923402-21923763,21923861-21923951,21924048-219241... 25 7.5
12_01_0157 - 1191231-1191316,1192238-1192382 25 9.9
09_06_0108 - 20912236-20912364,20912470-20912601,20912718-209130... 25 9.9
>02_03_0238 +
16730444-16730448,16730484-16730586,16732043-16732099,
16732198-16732346,16732450-16732545,16732620-16732695,
16732810-16732883,16732991-16733408
Length = 325
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 27 ETSVIKKNKVWVRKWIDRSDKLGATKCLLKELALEEIPKNT 67
+ I K +W K I + L ATK L KEL++ E+ +NT
Sbjct: 25 QADTIGKRFLW--KCISEEELLQATKELDKELSMHEMRRNT 63
>05_01_0042 -
290077-290676,291093-291233,291675-291764,
292364-292563,292685-292743,292827-292942
Length = 401
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 37 WVRKWIDRSDKLGATKCLLKELALEEIPKNTSIG 70
WV+ WI + + KC L + E++ KN G
Sbjct: 35 WVKHWIPQDLATSSGKCALYKWVREDVYKNLKDG 68
>05_04_0288 +
19839597-19839821,19841882-19842107,19842494-19842582,
19845184-19845387,19845463-19845717,19845796-19846011,
19846611-19846766,19846880-19847039,19847702-19847788,
19847789-19847940,19848006-19848143,19848714-19848788,
19849166-19849444
Length = 753
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 20 ILEEVDEETSVIKKNKVWVRKWID 43
+LE VD + KVWV+ W+D
Sbjct: 100 MLEVVDSGKKSLYSAKVWVKPWLD 123
>01_06_1149 -
34901338-34901466,34901707-34901838,34901940-34902290,
34902301-34902619,34902756-34902784,34903641-34903715,
34903799-34903900,34904002-34904120,34904752-34904875,
34904976-34905026,34905143-34905241,34905751-34905861
Length = 546
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 41 WIDRSDKLGATKCLLKELALEEIPKNT 67
++ + DK+G K LLKEL EE T
Sbjct: 343 FVGKHDKMGMNKILLKELPPEETKVTT 369
>06_03_0671 +
23348958-23349101,23349475-23349834,23350003-23350302,
23350399-23350488,23353290-23353766
Length = 456
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 25 DEETSVIKKNKV--WVRKWIDRSDKLGATKCLLKELALE 61
DE+T IK+ ++ W K + R+ K+G K +K LA E
Sbjct: 137 DEKTDEIKRPELKNWQLKRLARALKIGRRKTSIKNLAGE 175
>01_01_0531 -
3892738-3892757,3893083-3893111,3893330-3893355,
3893639-3893767,3893884-3894151,3894355-3894694,
3894925-3895045,3895135-3895230,3895604-3895777,
3895902-3896068,3896675-3896840,3896915-3897053,
3897135-3897327,3897442-3897524,3897850-3897881
Length = 660
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 4 LQRNRVNKLIKLIVMAILEEVDEETSVIKK 33
LQ + V+K +K + AIL+EVD+E ++ ++
Sbjct: 408 LQTDSVDKELKSLKDAILQEVDKEGTLAEE 437
>12_01_0053 -
438527-438670,439038-439247,439401-439530,
439672-439842,440233-440355,440439-440543,
440656-441332,441498-441604,441970-442177,
442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 25.0 bits (52), Expect = 7.5
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 16 IVMAILEEVDEETSVIKKNKVWVRKWIDRSDKLGATKCLLKELALEEI 63
I+ I+EE+ ETS + ++ V + ID A L+++ AL+E+
Sbjct: 48 ILQLIIEEIQPETSELPDGRIQVHQEID-----AAVAELIEQEALDEL 90
>10_08_0173 +
15414628-15414890,15415001-15415074,15416322-15416401,
15417186-15417231,15417334-15417368,15417751-15417771,
15418418-15419133,15419292-15419324,15419517-15419813,
15420213-15420659,15420738-15420886,15421408-15421697,
15421774-15421898,15422006-15422156
Length = 908
Score = 25.0 bits (52), Expect = 7.5
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 37 WVRKWIDRSDKLGATKCLLKELALEEIPKNTSIGLV 72
W K + +SDK+ + ++ L L+EI +N+ +G V
Sbjct: 423 WSSKGMSKSDKIIVLERVIGSLGLQEI-RNSLVGTV 457
>06_03_0568 +
22351552-22351679,22352176-22352227,22353044-22353117,
22353233-22353322,22353833-22353976,22354885-22354973,
22355539-22355612,22357233-22357317,22357677-22357952,
22358392-22358420
Length = 346
Score = 25.0 bits (52), Expect = 7.5
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 19 AILEEVDEETSVIKKNKVWVRKWIDRSDKLGATKCLLKELAL 60
A L E + + ++VW R+W + LG++ + L L
Sbjct: 236 ARLPEANHACPAMMSDRVWPRRWQAKEPPLGSSSAHRRSLPL 277
>05_06_0091 + 25462802-25462953,25464937-25465018
Length = 77
Score = 25.0 bits (52), Expect = 7.5
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 17 VMAILEEVDEETSVIKKNKVWVRKWIDRSDKLGA 50
V+ + +V + S+ ++N +RKW++ A
Sbjct: 17 VLLLRSDVKQSASIFRRNVRHIRKWLEEESAAAA 50
>05_05_0051 +
21923402-21923763,21923861-21923951,21924048-21924196,
21924279-21924522,21924664-21924768,21924842-21925024,
21925118-21925319,21925896-21926372,21926680-21926771,
21927265-21927444
Length = 694
Score = 25.0 bits (52), Expect = 7.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 10 NKLIKLIVMAILEEVDEETSVIKKNKVWVRKWIDRSDKLGATKCL 54
+K+ L+V+ + E V+ K V W+ S+ +G T CL
Sbjct: 516 SKVPTLVVVISGRPLVVEPQVLDKVDALVAAWLPGSEGMGVTDCL 560
>12_01_0157 - 1191231-1191316,1192238-1192382
Length = 76
Score = 24.6 bits (51), Expect = 9.9
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 39 RKWIDRSDKLGATKCLLKELALEEIPKNTSIG 70
R W ++ DK+G C L++ +N +IG
Sbjct: 29 RSWREKKDKMGQEICSAIPPDLQDYDRNFNIG 60
>09_06_0108 -
20912236-20912364,20912470-20912601,20912718-20913071,
20913161-20913407,20913489-20913565,20913971-20914045,
20914118-20914219,20914329-20914447,20914861-20914984,
20915081-20915131,20915247-20915345,20915839-20915949
Length = 539
Score = 24.6 bits (51), Expect = 9.9
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 25 DEETSVIKKNKVWVRKWIDRSDKLGATKCLLKELALEE 62
D ET ++ N V+ + + + +K+G LLKEL +E
Sbjct: 320 DPETQALEIN-VFDWEQVGKHEKMGMNNILLKELPADE 356
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,805,073
Number of Sequences: 37544
Number of extensions: 54325
Number of successful extensions: 125
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 115
Number of HSP's gapped (non-prelim): 14
length of query: 72
length of database: 14,793,348
effective HSP length: 52
effective length of query: 20
effective length of database: 12,841,060
effective search space: 256821200
effective search space used: 256821200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)
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