GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000746-TA|BGIBMGA000746-PA|undefined
         (437 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   5.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   6.7  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)

Query: 413 NKEAD-ANEQKSEADNEGSDNNQANE 437
           N+ AD  N     A+N+ +DN  AN+
Sbjct: 429 NQNADNQNADNQNANNQNADNQNANK 454


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 131 ELGTVTLTLPESNLIFNSSEV 151
           E+  +TLTLP   +++N  E+
Sbjct: 369 EIVMLTLTLPGIGVVYNGDEI 389


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.133    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,930
Number of Sequences: 429
Number of extensions: 3663
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 3
length of query: 437
length of database: 140,377
effective HSP length: 60
effective length of query: 377
effective length of database: 114,637
effective search space: 43218149
effective search space used: 43218149
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)