Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000745-TA|BGIBMGA000745-PA|IPR006994|Basic
helix-loop-helix, Nulp1-type
(271 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ297734-1|CAC11127.1| 702|Drosophila melanogaster hypothetical... 95 7e-20
AF145663-1|AAD38638.1| 702|Drosophila melanogaster BcDNA.GH1102... 95 7e-20
AE014296-1369|AAF50489.3| 702|Drosophila melanogaster CG7927-PA... 95 7e-20
AY089287-1|AAL90025.1| 726|Drosophila melanogaster AT08349p pro... 31 2.2
AE013599-1448|AAM68666.1| 1740|Drosophila melanogaster CG8487-PA... 31 2.2
AE013599-1447|AAF58532.2| 1983|Drosophila melanogaster CG8487-PB... 31 2.2
AE014134-677|AAF51061.1| 3115|Drosophila melanogaster CG3921-PA ... 29 6.8
>AJ297734-1|CAC11127.1| 702|Drosophila melanogaster hypothetical
protein protein.
Length = 702
Score = 95.5 bits (227), Expect = 7e-20
Identities = 43/107 (40%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Query: 50 MHVDFMLES-HVRLEYKYVENRPFHVAILKYIYMLTNKACHRTALELAKVMLNIDP-SDP 107
+H++F L S + RL+Y+ ENR F++ + K+ L +AC RTA E++K++L++ P +DP
Sbjct: 308 LHINFSLTSGNCRLDYRRQENRSFYIVLFKHAQYLEERACSRTAFEISKLLLSLQPDTDP 367
Query: 108 CGVMLIVDVLALRAREHLWLVQAYEAWAVEKDASSLFNMQYSYPLAL 154
++L++D ALR+++ WLV+ YE + ++ + L NM YSY LAL
Sbjct: 368 LAMILVIDYYALRSKQFEWLVEFYEKYNAARNLNQLPNMAYSYALAL 414
Score = 38.7 bits (86), Expect = 0.008
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 2 SILERKEDITYFVFNHNDYYQKMQRMFLFVLHNRVGNMFLPIDRASKDMHVDFMLE 57
SI + D+ +F F H+ YYQ +Q+MFL L R+ + FL HVD +++
Sbjct: 225 SITDNGADVQWFAFEHSQYYQGVQQMFLSAL-ERIDSEFLITLIKRCPYHVDSLVQ 279
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 175 LQELINFYAKMAYGKWREPPVMDWLMTVLNELLDEYETQPHIQVRCRIFSNERMNIYRGY 234
L +L+ Y A WR+ V+ WL + +N +LD E++ + + +R Y G
Sbjct: 472 LHQLVCLYVCRARVVWRQNEVLPWLESNVNIVLDRIESKDPL---VNEYKEKRSLRYSGT 528
Query: 235 PLQ-VIRHLAI 244
P + ++RH+ +
Sbjct: 529 PPRPILRHVIL 539
>AF145663-1|AAD38638.1| 702|Drosophila melanogaster BcDNA.GH11023
protein.
Length = 702
Score = 95.5 bits (227), Expect = 7e-20
Identities = 43/107 (40%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Query: 50 MHVDFMLES-HVRLEYKYVENRPFHVAILKYIYMLTNKACHRTALELAKVMLNIDP-SDP 107
+H++F L S + RL+Y+ ENR F++ + K+ L +AC RTA E++K++L++ P +DP
Sbjct: 308 LHINFSLTSGNCRLDYRRQENRSFYIVLFKHAQYLEERACSRTAFEISKLLLSLQPDTDP 367
Query: 108 CGVMLIVDVLALRAREHLWLVQAYEAWAVEKDASSLFNMQYSYPLAL 154
++L++D ALR+++ WLV+ YE + ++ + L NM YSY LAL
Sbjct: 368 LAMILVIDYYALRSKQFEWLVEFYEKYNAARNLNQLPNMAYSYALAL 414
Score = 38.7 bits (86), Expect = 0.008
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 2 SILERKEDITYFVFNHNDYYQKMQRMFLFVLHNRVGNMFLPIDRASKDMHVDFMLE 57
SI + D+ +F F H+ YYQ +Q+MFL L R+ + FL HVD +++
Sbjct: 225 SITDNGADVQWFAFEHSQYYQGVQQMFLSAL-ERIDSEFLITLIKRCPYHVDSLVQ 279
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 175 LQELINFYAKMAYGKWREPPVMDWLMTVLNELLDEYETQPHIQVRCRIFSNERMNIYRGY 234
L +L+ Y A WR+ V+ WL + +N +LD E++ + + +R Y G
Sbjct: 472 LHQLVCLYVCRARVVWRQNEVLPWLESNVNIVLDRIESKDPL---VNEYKEKRSLRYSGT 528
Query: 235 PLQ-VIRHLAI 244
P + ++RH+ +
Sbjct: 529 PPRPILRHVIL 539
>AE014296-1369|AAF50489.3| 702|Drosophila melanogaster CG7927-PA
protein.
Length = 702
Score = 95.5 bits (227), Expect = 7e-20
Identities = 43/107 (40%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Query: 50 MHVDFMLES-HVRLEYKYVENRPFHVAILKYIYMLTNKACHRTALELAKVMLNIDP-SDP 107
+H++F L S + RL+Y+ ENR F++ + K+ L +AC RTA E++K++L++ P +DP
Sbjct: 308 LHINFSLTSGNCRLDYRRQENRSFYIVLFKHAQYLEERACSRTAFEISKLLLSLQPDTDP 367
Query: 108 CGVMLIVDVLALRAREHLWLVQAYEAWAVEKDASSLFNMQYSYPLAL 154
++L++D ALR+++ WLV+ YE + ++ + L NM YSY LAL
Sbjct: 368 LAMILVIDYYALRSKQFEWLVEFYEKYNAARNLNQLPNMAYSYALAL 414
Score = 38.7 bits (86), Expect = 0.008
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 2 SILERKEDITYFVFNHNDYYQKMQRMFLFVLHNRVGNMFLPIDRASKDMHVDFMLE 57
SI + D+ +F F H+ YYQ +Q+MFL L R+ + FL HVD +++
Sbjct: 225 SITDNGADVQWFAFEHSQYYQGVQQMFLSAL-ERIDSEFLITLIKRCPYHVDSLVQ 279
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 175 LQELINFYAKMAYGKWREPPVMDWLMTVLNELLDEYETQPHIQVRCRIFSNERMNIYRGY 234
L +L+ Y A WR+ V+ WL + +N +LD E++ + + +R Y G
Sbjct: 472 LHQLVCLYVCRARVVWRQNEVLPWLESNVNIVLDRIESKDPL---VNEYKEKRSLRYSGT 528
Query: 235 PLQ-VIRHLAI 244
P + ++RH+ +
Sbjct: 529 PPRPILRHVIL 539
>AY089287-1|AAL90025.1| 726|Drosophila melanogaster AT08349p
protein.
Length = 726
Score = 30.7 bits (66), Expect = 2.2
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 24 MQRMFLFVLHNRVGNMFLPIDRASKDMHVDFMLESHVRLEYKYVENRPFHVAILKY-IYM 82
M+ + V+HNR + +P+ A +D + +L Y Y+ NR VA+LK IY+
Sbjct: 99 MEFLVKIVVHNR--DRMIPLWPAVRDQ-MYLLLMGSASCGYDYLLNRCI-VAVLKLAIYL 154
Query: 83 LTNKACHRTALELAKVMLNIDPS 105
+ N+ L+ K++L + P+
Sbjct: 155 MRNEELCPIVLQSLKMLLMLKPA 177
>AE013599-1448|AAM68666.1| 1740|Drosophila melanogaster CG8487-PA,
isoform A protein.
Length = 1740
Score = 30.7 bits (66), Expect = 2.2
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 24 MQRMFLFVLHNRVGNMFLPIDRASKDMHVDFMLESHVRLEYKYVENRPFHVAILKY-IYM 82
M+ + V+HNR + +P+ A +D + +L Y Y+ NR VA+LK IY+
Sbjct: 1114 MEFLVKIVVHNR--DRMIPLWPAVRDQ-MYLLLMGSASCGYDYLLNRCI-VAVLKLAIYL 1169
Query: 83 LTNKACHRTALELAKVMLNIDPS 105
+ N+ L+ K++L + P+
Sbjct: 1170 MRNEELCPIVLQSLKMLLMLKPA 1192
>AE013599-1447|AAF58532.2| 1983|Drosophila melanogaster CG8487-PB,
isoform B protein.
Length = 1983
Score = 30.7 bits (66), Expect = 2.2
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 24 MQRMFLFVLHNRVGNMFLPIDRASKDMHVDFMLESHVRLEYKYVENRPFHVAILKY-IYM 82
M+ + V+HNR + +P+ A +D + +L Y Y+ NR VA+LK IY+
Sbjct: 1114 MEFLVKIVVHNR--DRMIPLWPAVRDQ-MYLLLMGSASCGYDYLLNRCI-VAVLKLAIYL 1169
Query: 83 LTNKACHRTALELAKVMLNIDPS 105
+ N+ L+ K++L + P+
Sbjct: 1170 MRNEELCPIVLQSLKMLLMLKPA 1192
>AE014134-677|AAF51061.1| 3115|Drosophila melanogaster CG3921-PA
protein.
Length = 3115
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 206 LLDEYETQPHIQVRCRIFSNERMNIYRGYPLQVIRHLAIISPLWKFI 252
+ D T+ + QV CR + +N+Y G+ ++ H ++ +W ++
Sbjct: 1949 ICDSRFTERNAQVVCRELGYDPLNVYYGHDRRIEFHTNSLTRIWSWV 1995
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.328 0.140 0.436
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,630,188
Number of Sequences: 52641
Number of extensions: 484307
Number of successful extensions: 1165
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1152
Number of HSP's gapped (non-prelim): 13
length of query: 271
length of database: 24,830,863
effective HSP length: 84
effective length of query: 187
effective length of database: 20,409,019
effective search space: 3816486553
effective search space used: 3816486553
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 61 (28.7 bits)
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