GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000745-TA|BGIBMGA000745-PA|IPR006994|Basic
helix-loop-helix, Nulp1-type
         (271 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   7.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   7.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   7.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   7.4  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
          vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/18 (33%), Positives = 13/18 (72%)

Query: 22 QKMQRMFLFVLHNRVGNM 39
          +K+ RM+ F+LH  + ++
Sbjct: 70 KKLSRMYFFILHLSIADL 87


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 247 PLWKFIIDEASHFLNVFTNV 266
           P WK I  E  HF+++  N+
Sbjct: 470 PDWKPISKEEIHFIDIGENI 489


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 247 PLWKFIIDEASHFLNVFTNV 266
           P WK I  E  HF+++  N+
Sbjct: 472 PDWKPISKEEIHFIDIGENI 491


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 247 PLWKFIIDEASHFLNVFTNV 266
           P WK I  E  HF+++  N+
Sbjct: 470 PDWKPISKEEIHFIDIGENI 489


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 247 PLWKFIIDEASHFLNVFTNV 266
           P WK I  E  HF+++  N+
Sbjct: 472 PDWKPISKEEIHFIDIGENI 491


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.328    0.140    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,924
Number of Sequences: 317
Number of extensions: 2643
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 5
length of query: 271
length of database: 114,650
effective HSP length: 56
effective length of query: 215
effective length of database: 96,898
effective search space: 20833070
effective search space used: 20833070
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 42 (21.0 bits)