GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000745-TA|BGIBMGA000745-PA|IPR006994|Basic
helix-loop-helix, Nulp1-type
         (271 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       27   0.43 
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            26   1.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   2.3  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   3.1  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       23   9.3  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    23   9.3  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   9.3  

>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 37  GNMFLPIDRASKDMHVDFMLESHVRLEYKYVENRPFHVAILKYIYMLTNKACHRTALELA 96
           G  F+   +  K ++ D+      RL+ K    RP H+   K ++   N  CH++   +A
Sbjct: 82  GIFFIEYLQKGKIINSDYYKALLERLKVKSAAKRP-HMKKKKVLFHQDNAPCHKSLRTMA 140

Query: 97  KV 98
           K+
Sbjct: 141 KI 142


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 4/120 (3%)

Query: 137 EKDASSLFNMQYSYPLALFHIAVKHKGLGFSLDRTANDLQELINFYAKMAYGKWREPPVM 196
           E+D     + Q S+   +   ++K + L  +  +T    +E++N        +W++  + 
Sbjct: 162 EQDHVQRLSNQRSHYKRIQCYSLKQRSLVDAFQKTIRKAEEVLNLVYNKYIFEWQKTQMF 221

Query: 197 DWLMTVLNELLDEYETQPHIQVRCRIFSNERMNIYRGYPLQVIRHLA--IISPLWKFIID 254
             + +     LDE +T    +    I  N +  I+     Q+  H++  I S LWK + D
Sbjct: 222 PEVRSTNAYSLDEIQT--WYESLAAIMWNTKDQIHLTMKSQLREHVSQEINSDLWKVMKD 279


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 116 VLALRAREHLWLVQAYEAWAVEKDASSLFNMQY 148
           VL LR  +HL+  + YE   +E +  +L N+Q+
Sbjct: 430 VLWLREHKHLFQGKIYEPMILELNVPALENVQF 462


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 208  DEYETQPHIQVRCRIFSNERMNIYRGYPLQV 238
            DE ET  H+   C  F+ ER+ +     ++V
Sbjct: 976  DEDETVDHVMFHCPRFAEERLQLNESCRVEV 1006


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 5   ERKEDITYFVFNHNDYYQKMQ 25
           ER  D T  +F H D+Y + Q
Sbjct: 431 ERPADPTAVIFPHEDHYSQPQ 451


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 11/21 (52%), Positives = 12/21 (57%)

Query: 201 TVLNELLDEYETQPHIQVRCR 221
           TV+N  L E    PHIQ R R
Sbjct: 321 TVMNFCLYELAKNPHIQERLR 341


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 1    MSILERKEDITYFVFNHNDYY 21
            + +L+  ++  YFV + NDYY
Sbjct: 1048 VQVLDENDNNPYFVDSVNDYY 1068


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.328    0.140    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,735
Number of Sequences: 2123
Number of extensions: 10164
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 7
length of query: 271
length of database: 516,269
effective HSP length: 63
effective length of query: 208
effective length of database: 382,520
effective search space: 79564160
effective search space used: 79564160
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 47 (23.0 bits)