Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000745-TA|BGIBMGA000745-PA|IPR006994|Basic
helix-loop-helix, Nulp1-type
(271 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ321703-1|ABC55265.1| 676|Homo sapiens NULP1 protein. 86 1e-16
BC011884-1|AAH11884.1| 676|Homo sapiens transcription factor 25... 86 1e-16
BC009349-1|AAH09349.1| 676|Homo sapiens transcription factor 25... 86 1e-16
BC000959-1|AAH00959.1| 676|Homo sapiens transcription factor 25... 86 1e-16
AB028972-1|BAA83001.1| 550|Homo sapiens KIAA1049 protein protein. 86 1e-16
>DQ321703-1|ABC55265.1| 676|Homo sapiens NULP1 protein.
Length = 676
Score = 86.2 bits (204), Expect = 1e-16
Identities = 43/107 (40%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 51 HVDFMLESHV-RLEYKYVENRPFHVAILKYIYMLTNKACHRTALELAKVMLNIDP-SDPC 108
H F L S RL+Y+ ENR F++A+ K + L + C RTALE K++L+++P DP
Sbjct: 321 HPLFSLTSGACRLDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLILSLEPDEDPL 380
Query: 109 GVMLIVDVLALRAREHLWLVQAYEAWAVEKDASSLFNMQYSYPLALF 155
++L++D LALRAR + +L++ ++ W ++ S L N +S PLA F
Sbjct: 381 CMLLLIDHLALRARNYEYLIRLFQEWEAHRNLSQLPNFAFSVPLAYF 427
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 175 LQELINFYAKMAYGKWREPPVMDWLMTVLNELLDEYETQPHIQVRCRIFSNERMNIYRGY 234
L +L+N Y ++ W+EP M WL ++E+L + C N R +Y+
Sbjct: 495 LSQLVNLYLGRSHFLWKEPATMSWLEENVHEVLQAVDAGDPAVEAC---ENRRKVLYQRA 551
Query: 235 PLQVIRHLAI 244
P + RH+ +
Sbjct: 552 PRNIHRHVIL 561
Score = 38.3 bits (85), Expect = 0.028
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 1 MSILERKEDITYFVFNHNDYYQKMQRMFLFVLHNRVGNMFLPIDRASKDMHVDFMLE 57
M +LE K+ +++F F H++ YQ+ Q FL + + N + + + S HVD +L+
Sbjct: 236 MRLLESKKGLSFFAFEHSEEYQQAQHKFLVAVESMEPNNIVVLLQTS-PYHVDSLLQ 291
>BC011884-1|AAH11884.1| 676|Homo sapiens transcription factor 25
(basic helix-loop-helix) protein.
Length = 676
Score = 86.2 bits (204), Expect = 1e-16
Identities = 43/107 (40%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 51 HVDFMLESHV-RLEYKYVENRPFHVAILKYIYMLTNKACHRTALELAKVMLNIDP-SDPC 108
H F L S RL+Y+ ENR F++A+ K + L + C RTALE K++L+++P DP
Sbjct: 321 HPLFSLTSGACRLDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLILSLEPDEDPL 380
Query: 109 GVMLIVDVLALRAREHLWLVQAYEAWAVEKDASSLFNMQYSYPLALF 155
++L++D LALRAR + +L++ ++ W ++ S L N +S PLA F
Sbjct: 381 CMLLLIDHLALRARNYEYLIRLFQEWEAHRNLSQLPNFAFSVPLAYF 427
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 175 LQELINFYAKMAYGKWREPPVMDWLMTVLNELLDEYETQPHIQVRCRIFSNERMNIYRGY 234
L +L+N Y ++ W+EP M WL ++E+L + C N R +Y+
Sbjct: 495 LSQLVNLYLGRSHFLWKEPATMSWLEENVHEVLQAVDAGDPAVEAC---ENRRKVLYQRA 551
Query: 235 PLQVIRHLAI 244
P + RH+ +
Sbjct: 552 PRNIHRHVIL 561
Score = 38.3 bits (85), Expect = 0.028
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 1 MSILERKEDITYFVFNHNDYYQKMQRMFLFVLHNRVGNMFLPIDRASKDMHVDFMLE 57
M +LE K+ +++F F H++ YQ+ Q FL + + N + + + S HVD +L+
Sbjct: 236 MRLLESKKGLSFFAFEHSEEYQQAQHKFLVAVESMEPNNIVVLLQTS-PYHVDSLLQ 291
>BC009349-1|AAH09349.1| 676|Homo sapiens transcription factor 25
(basic helix-loop-helix) protein.
Length = 676
Score = 86.2 bits (204), Expect = 1e-16
Identities = 43/107 (40%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 51 HVDFMLESHV-RLEYKYVENRPFHVAILKYIYMLTNKACHRTALELAKVMLNIDP-SDPC 108
H F L S RL+Y+ ENR F++A+ K + L + C RTALE K++L+++P DP
Sbjct: 321 HPLFSLTSGACRLDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLILSLEPDEDPL 380
Query: 109 GVMLIVDVLALRAREHLWLVQAYEAWAVEKDASSLFNMQYSYPLALF 155
++L++D LALRAR + +L++ ++ W ++ S L N +S PLA F
Sbjct: 381 CMLLLIDHLALRARNYEYLIRLFQEWEAHRNLSQLPNFAFSVPLAYF 427
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 175 LQELINFYAKMAYGKWREPPVMDWLMTVLNELLDEYETQPHIQVRCRIFSNERMNIYRGY 234
L +L+N Y ++ W+EP M WL ++E+L + C N R +Y+
Sbjct: 495 LSQLVNLYLGRSHFLWKEPATMSWLEENVHEVLQAVDAGDPAVEAC---ENRRKVLYQRA 551
Query: 235 PLQVIRHLAI 244
P + RH+ +
Sbjct: 552 PRNIHRHVIL 561
Score = 38.3 bits (85), Expect = 0.028
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 1 MSILERKEDITYFVFNHNDYYQKMQRMFLFVLHNRVGNMFLPIDRASKDMHVDFMLE 57
M +LE K+ +++F F H++ YQ+ Q FL + + N + + + S HVD +L+
Sbjct: 236 MRLLESKKGLSFFAFEHSEEYQQAQHKFLVAVESMEPNNIVVLLQTS-PYHVDSLLQ 291
>BC000959-1|AAH00959.1| 676|Homo sapiens transcription factor 25
(basic helix-loop-helix) protein.
Length = 676
Score = 86.2 bits (204), Expect = 1e-16
Identities = 43/107 (40%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 51 HVDFMLESHV-RLEYKYVENRPFHVAILKYIYMLTNKACHRTALELAKVMLNIDP-SDPC 108
H F L S RL+Y+ ENR F++A+ K + L + C RTALE K++L+++P DP
Sbjct: 321 HPLFSLTSGACRLDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLILSLEPDEDPL 380
Query: 109 GVMLIVDVLALRAREHLWLVQAYEAWAVEKDASSLFNMQYSYPLALF 155
++L++D LALRAR + +L++ ++ W ++ S L N +S PLA F
Sbjct: 381 CMLLLIDHLALRARNYEYLIRLFQEWEAHRNLSQLPNFAFSVPLAYF 427
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 175 LQELINFYAKMAYGKWREPPVMDWLMTVLNELLDEYETQPHIQVRCRIFSNERMNIYRGY 234
L +L+N Y ++ W+EP M WL ++E+L + C N R +Y+
Sbjct: 495 LSQLVNLYLGRSHFLWKEPATMSWLEENVHEVLQAVDAGDPAVEAC---ENRRKVLYQRA 551
Query: 235 PLQVIRHLAI 244
P + RH+ +
Sbjct: 552 PRNIHRHVIL 561
Score = 38.3 bits (85), Expect = 0.028
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 1 MSILERKEDITYFVFNHNDYYQKMQRMFLFVLHNRVGNMFLPIDRASKDMHVDFMLE 57
M +LE K+ +++F F H++ YQ+ Q FL + + N + + + S HVD +L+
Sbjct: 236 MRLLESKKGLSFFAFEHSEEYQQAQHKFLVAVESMEPNNIVVLLQTS-PYHVDSLLQ 291
>AB028972-1|BAA83001.1| 550|Homo sapiens KIAA1049 protein protein.
Length = 550
Score = 86.2 bits (204), Expect = 1e-16
Identities = 43/107 (40%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 51 HVDFMLESHV-RLEYKYVENRPFHVAILKYIYMLTNKACHRTALELAKVMLNIDP-SDPC 108
H F L S RL+Y+ ENR F++A+ K + L + C RTALE K++L+++P DP
Sbjct: 195 HPLFSLTSGACRLDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLILSLEPDEDPL 254
Query: 109 GVMLIVDVLALRAREHLWLVQAYEAWAVEKDASSLFNMQYSYPLALF 155
++L++D LALRAR + +L++ ++ W ++ S L N +S PLA F
Sbjct: 255 CMLLLIDHLALRARNYEYLIRLFQEWEAHRNLSQLPNFAFSVPLAYF 301
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 175 LQELINFYAKMAYGKWREPPVMDWLMTVLNELLDEYETQPHIQVRCRIFSNERMNIYRGY 234
L +L+N Y ++ W+EP M WL ++E+L + C N R +Y+
Sbjct: 369 LSQLVNLYLGRSHFLWKEPATMSWLEENVHEVLQAVDAGDPAVEAC---ENRRKVLYQRA 425
Query: 235 PLQVIRHLAI 244
P + RH+ +
Sbjct: 426 PRNIHRHVIL 435
Score = 38.3 bits (85), Expect = 0.028
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 1 MSILERKEDITYFVFNHNDYYQKMQRMFLFVLHNRVGNMFLPIDRASKDMHVDFMLE 57
M +LE K+ +++F F H++ YQ+ Q FL + + N + + + S HVD +L+
Sbjct: 110 MRLLESKKGLSFFAFEHSEEYQQAQHKFLVAVESMEPNNIVVLLQTS-PYHVDSLLQ 165
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.328 0.140 0.436
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,659,569
Number of Sequences: 224733
Number of extensions: 1462376
Number of successful extensions: 2877
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2857
Number of HSP's gapped (non-prelim): 15
length of query: 271
length of database: 73,234,838
effective HSP length: 89
effective length of query: 182
effective length of database: 53,233,601
effective search space: 9688515382
effective search space used: 9688515382
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 64 (29.9 bits)
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