Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000743-TA|BGIBMGA000743-PA|IPR001107|Band 7 protein,
IPR004851|Flotillin
(423 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 38 0.002
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 33 0.057
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.31
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 30 0.71
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 29 0.93
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 29 1.2
SPAC823.04 |||rRNA processing protein, DUF947|Schizosaccharomyce... 29 1.2
SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces pombe... 28 2.2
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 28 2.8
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 27 3.8
SPBC14F5.11c |mug186||sorting nexin Snx41|Schizosaccharomyces po... 27 3.8
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 5.0
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 27 5.0
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 27 5.0
SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyce... 27 5.0
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 27 6.6
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 6.6
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 26 8.7
SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subuni... 26 8.7
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 26 8.7
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 229 EVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKWEVQRREKELEATIRR 288
E K E E Q K +++ K ++ +E+ ++ ++ E QRR++E + +R
Sbjct: 94 EAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIRLQEQQRRKEERDQKLRE 153
Query: 289 PAEAEKFRLEKIAEAHRQK 307
EA++ R E+I RQ+
Sbjct: 154 KEEAQRLRQEQILNKERQQ 172
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 33.5 bits (73), Expect = 0.057
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 223 KAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKWEVQRREKEL 282
K ++E K+ + +++ K K+R K++Q+++A E Q ++ Q +K L
Sbjct: 571 KLLEEIEEENKRKQERELKKIRE-KEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKAL 629
Query: 283 EATIRRPAEAEKFRLEKIAEAHRQK 307
EA +R EA K R E+ + ++K
Sbjct: 630 EA--KRQEEARKKREEQRLKREQEK 652
Score = 32.3 bits (70), Expect = 0.13
Identities = 22/94 (23%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 214 KSQRDFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKW 273
K +++ ELKK + K+ + + +L+ AK ++R + E ++A + + ++
Sbjct: 581 KRKQERELKK------IREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQ 634
Query: 274 EVQRREKELEATIRRPAEAEKFRLEKIAEAHRQK 307
E R+++E E ++R E ++ LE+ +QK
Sbjct: 635 EEARKKRE-EQRLKREQEKKQQELERQKREEKQK 667
Score = 30.7 bits (66), Expect = 0.40
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 211 EIAKSQRDFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQEIAV 270
E+ + +R E K+ + E KK + E E A + QR++EE+ + + ER + +
Sbjct: 656 ELERQKR--EEKQKQKEREKKLKKQQQEADREKMARE--QRLREEEEKRILEERKRREKL 711
Query: 271 QKWEVQRREKELEATIRRPAEAEKFRLEK 299
K E +RR +EL + + +E ++ RL +
Sbjct: 712 DKEEEERRRREL---LEKESEEKERRLRE 737
Score = 27.5 bits (58), Expect = 3.8
Identities = 21/100 (21%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 208 NDTEIAKSQRDFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQE 267
++ + + +R F++ AA E +A E + + AK + I+EE + ++ +E
Sbjct: 533 DEQRMEEGRRMFQIF-AARLFEQRVLQAYREKVAQQRQAKLLEEIEEENKR----KQERE 587
Query: 268 IAVQKWEVQRREKELEATIRRPAEAEKFRLEKIAEAHRQK 307
+ + + ++R+K+ + + + E ++ E++AE QK
Sbjct: 588 LKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQK 627
Score = 27.1 bits (57), Expect = 5.0
Identities = 19/94 (20%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 214 KSQRDFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKW 273
+++R E +K + + ++ + + E Q + KQ+ KE + ++ ++ +
Sbjct: 630 EAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAR 689
Query: 274 EVQRREKELEATIRRPAEAEKFRLEKIAEAHRQK 307
E + RE+E + + EK L+K E R++
Sbjct: 690 EQRLREEEEKRILEERKRREK--LDKEEEERRRR 721
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 31.1 bits (67), Expect = 0.31
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 207 LNDTEIAKSQRDFELKKAAYDV--EVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVER 264
L+D K ++ ELK+ D+ + T KA A+ + Q +K+ E+ Q ++ R
Sbjct: 156 LHDLNEQKDKKIKELKERINDLTYDYETLKANADDSEGKQTLVSKREAALEEFQSKLLIR 215
Query: 265 TQEIAVQKW-------EVQRREKELEATIRRPAEAEKF---RLEKIAEAH 304
EI ++ ++++REK+LE + + E EK R K++EA+
Sbjct: 216 ENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERATKLSEAN 265
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 29.9 bits (64), Expect = 0.71
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 214 KSQRDFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKW 273
K++R+ E +KA + E K+ EAE + +A + +R EE+ + E+ + A +K
Sbjct: 576 KAKREAE-EKAKREAEEKAKR-EAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKA 633
Query: 274 EVQRREK---ELEATIRRPAEAEKFRLEKIAEAHRQ 306
+ + EK E E +R AE EK + E A R+
Sbjct: 634 KREAEEKAKREAEEKAKREAE-EKAKREAEENAKRE 668
Score = 29.5 bits (63), Expect = 0.93
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 214 KSQRDFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKW 273
+++R+ E +KA + E K+ EAE + +A + +R EE+ + E+ + A +K
Sbjct: 568 QAKREAE-EKAKREAEEKAKR-EAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKA 625
Query: 274 EVQRREK---ELEATIRRPAEAEKFRLEKIAEAHRQ 306
+ + EK E E +R AE EK + E +A R+
Sbjct: 626 KREAEEKAKREAEEKAKREAE-EKAKREAEEKAKRE 660
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 29.5 bits (63), Expect = 0.93
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 208 NDTEIAKSQRDFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQ 258
N E +++RD E+ + D E KK E E + + ++RIK+ ++Q
Sbjct: 47 NIEEEEEAERDIEISSESSDEEAELKKLEEEGEEVEKILRDEERIKKRKIQ 97
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 208 NDTEIAKS-QRDFELKKAAYDVEVHTKKA-EAEMAYELQAAKTKQRIKEEQMQIAVVERT 265
ND +++ + + KKAA D E+ +++A EA+ + E A+ +++ +EE + A R
Sbjct: 133 NDRSTSEALELEARAKKAAQDAELASERAREAQSSIERSASLREKQAREEAERAATALRE 192
Query: 266 QEI 268
E+
Sbjct: 193 AEL 195
>SPAC823.04 |||rRNA processing protein, DUF947|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 189
Score = 29.1 bits (62), Expect = 1.2
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 209 DTEIAKSQRDFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQE- 267
D E A+S R LK +E H ++ AE A+ K+R+KE + + Q+
Sbjct: 84 DQERAESIRQ-TLKSLLSKMERHLEEERAERVMHEFRAQEKERVKEGKKPFYLKRNEQKK 142
Query: 268 -IAVQKWEVQRREKELEATI----RRPAEAEKFRLEK 299
I + K++ K L+ I RR A+ EK L +
Sbjct: 143 LIQMDKYKSMEGTKALDKYIEKKRRRRAQKEKKHLPR 179
>SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 551
Score = 28.3 bits (60), Expect = 2.2
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 214 KSQRDFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKW 273
K F K A V + K+A A+ EL++ KT Q ++ ++ +E + ++V +
Sbjct: 21 KHSISFAGKLAVQQVSSYIKRASADDQSELESVKT-QLLEMIRVVTPAIELIEIMSVGEN 79
Query: 274 EVQRREKELEATIRRPAEAEKFRLEKIAEAHRQ 306
E + K+L ++ A+ E+F ++ AH +
Sbjct: 80 ENFKSTKQLVDSLH--ADIEQFTKHVLSAAHSE 110
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 220 ELKKAAYDVEVHTKKAEA--EMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKWEVQR 277
EL++ + + K E ++ LQ++ T + + +++ + ++EI +QKW +Q
Sbjct: 407 ELRELEFKCKQQKKTIEECKHISQSLQSSLTAESSRNKELVAGFLMLSEEIGIQKWIIQS 466
Query: 278 REK 280
K
Sbjct: 467 LSK 469
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.5 bits (58), Expect = 3.8
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 208 NDTEIAKSQRDFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVE-RTQ 266
ND+ AK ++ K+ +V K E + A E + +QRI+EE+ +IA E R
Sbjct: 228 NDSS-AKGKQAAGSKRKGPNVTALQKMLEEKRARE----EEEQRIREEEARIAEEEKRLA 282
Query: 267 EI-AVQKWEVQRREKELEATIRRPAEAEKFRLEK 299
E+ +K E + ++KE E + +A+ L K
Sbjct: 283 EVEEARKEEARLKKKEKERKKKEEMKAQGKYLSK 316
>SPBC14F5.11c |mug186||sorting nexin Snx41|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 586
Score = 27.5 bits (58), Expect = 3.8
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 121 EEIYKDRKIFSKKVFEVASSDLINMGITVVSYTLKDIRDEEGYLKALGMARTAEVKRDAR 180
EE +D + + FE S D +TV+ T++D+ D ++ EV R
Sbjct: 449 EECLRDLRHNQSQDFETVSQDTSLTSVTVLPRTIRDVFDRIRFVLNGLTDNNVEVSRHNN 508
Query: 181 IG 182
IG
Sbjct: 509 IG 510
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/85 (17%), Positives = 41/85 (48%)
Query: 218 DFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKWEVQR 277
+++L+ AA + + +E +K Q+ + E+++ + + T + + V+
Sbjct: 508 NYDLQGAAVQYLQRRLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRE 567
Query: 278 REKELEATIRRPAEAEKFRLEKIAE 302
+ +LE + ++ + K +EK+ E
Sbjct: 568 LKLDLEKSKKKNEDLSKLEVEKVEE 592
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 27.1 bits (57), Expect = 5.0
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 213 AKSQRDFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRI-KEEQMQIA-VVERTQEIAV 270
A Q++ EL AA V V T + A+ ++ T I K +M ++ +E +EI
Sbjct: 88 ATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICA 147
Query: 271 QKWEVQRREKELEATIRRPAEAEKF 295
K E EKEL IR ++++
Sbjct: 148 DKIETVESEKELIKAIRTCISSKQY 172
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 27.1 bits (57), Expect = 5.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 231 HTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKWEVQRR 278
HT+K A A A K + I+E Q QI +I+ WE +RR
Sbjct: 333 HTQKINAFKAN--YARKYEATIQELQNQIGTAPNAPKISNSNWEEERR 378
>SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 211 EIAKSQRDFELKKAAYDVEVHTKKAEAE 238
EI + ++FE + DV++HT K E E
Sbjct: 150 EIDRQVQEFEKSSSDMDVQIHTHKREIE 177
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 26.6 bits (56), Expect = 6.6
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 238 EMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKWEVQRREKELEATIRRPAEAEK 294
E ++ +AAK EQ+Q + ++ A K E QRR+KE + +RR +K
Sbjct: 492 ESFFDWEAAKVGAPQSREQIQ-----KQRQKAKTKLENQRRDKERQEELRRKEAMQK 543
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.6 bits (56), Expect = 6.6
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 208 NDTEIAKSQRDFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQE 267
N EIA+ + E K Y+ E T+ A + KTK+ + E Q+ E++Q
Sbjct: 1566 NADEIARLRSQLESTKQYYEKEKETEILAARSELVAEKEKTKEEL-ENQLN----EKSQR 1620
Query: 268 IAVQKWEVQRREKE 281
I + + Q+ E
Sbjct: 1621 IKELEEQAQKNSSE 1634
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 26.2 bits (55), Expect = 8.7
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 227 DVEVHTKKAEAEMAYELQAAK-----TKQRIKEEQMQIAVVERTQEIAVQKWEVQRREKE 281
D+ T + AEM ++Q K K KE+ +++ + + A + ++Q +KE
Sbjct: 80 DLAAATPEELAEMEKQIQELKDEVSVVKTLYKEKCIELQALNNSLSPAEIREKIQSIDKE 139
Query: 282 LEATIRRPAEAEKFRLEKIAEAHRQKT 308
+E T + +++I++ QKT
Sbjct: 140 IEETSSKLESLRNGTVKQISKEAMQKT 166
>SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subunit
8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 26.2 bits (55), Expect = 8.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 243 LQAAKTKQRIKEEQMQIAVVERTQEIAVQKWEVQRREKELEATIRRPAEAEKFRLE 298
L+ K + + + ++ +ER QE+ K E +R +KELE TI + E K RL+
Sbjct: 174 LKQKKQRSEFRASKREMERLERDQELR-NKIE-ERNKKELE-TIEKLRELAKARLQ 226
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 219 FELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKWEVQRR 278
F+ A D + + E + Q + + I EE+ + ++R +E+ + E QRR
Sbjct: 7 FQKLMALADSQSAQAAVQIEQLRKAQIREKAREITEERNRQRKLQRERELRQKYEEEQRR 66
Query: 279 EKELEA 284
++ +EA
Sbjct: 67 QQAMEA 72
Score = 26.2 bits (55), Expect = 8.7
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 218 DFELKKAAYDVEVHTKKAEAEMAYELQAAKTKQRIKEEQMQIAVVERTQEIAVQKWEVQR 277
D + +AA +E K E A E+ + +QR + + ++ ++ Q E +R
Sbjct: 15 DSQSAQAAVQIEQLRKAQIREKAREITEERNRQRKLQRERELRQKYEEEQRRQQAMEAKR 74
Query: 278 REKELEATIRRP--AEAEKFRLEKIAEAHR 305
T RP + E R+ ++ E R
Sbjct: 75 IAASTRQTSERPPLSAEEAKRIREVKEKDR 104
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.129 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,354,316
Number of Sequences: 5004
Number of extensions: 43242
Number of successful extensions: 153
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 126
Number of HSP's gapped (non-prelim): 35
length of query: 423
length of database: 2,362,478
effective HSP length: 75
effective length of query: 348
effective length of database: 1,987,178
effective search space: 691537944
effective search space used: 691537944
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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