GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000743-TA|BGIBMGA000743-PA|IPR001107|Band 7 protein,
IPR004851|Flotillin
         (423 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.91 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   3.7  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.4 bits (53), Expect = 0.91
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 95  TEQEIQHIALVTLEGHQRAIMGSMT 119
           T QE+  +  VTL GHQ+ IM S+T
Sbjct: 958 TVQELTALG-VTLVGHQKKIMNSVT 981


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 206 FLNDTEIAKSQRDFELKKAAYDVEVHTKKAEAEM 239
           F  D  +A +Q+  ELK A    ++ +KK E  M
Sbjct: 348 FSRDLMLAGTQQSVELKLALDQEQLKSKKLEESM 381


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.129    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,320
Number of Sequences: 429
Number of extensions: 2357
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 423
length of database: 140,377
effective HSP length: 60
effective length of query: 363
effective length of database: 114,637
effective search space: 41613231
effective search space used: 41613231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)