Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000742-TA|BGIBMGA000742-PA|IPR003877|SPla/RYanodine
receptor SPRY, IPR001870|B302, (SPRY)-like
(546 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47865| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 6e-18
SB_48080| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 2e-09
SB_12174| Best HMM Match : SPRY (HMM E-Value=5.9e-05) 57 4e-08
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 44 2e-04
SB_6995| Best HMM Match : DUF740 (HMM E-Value=2.4) 34 0.25
SB_22188| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_23703| Best HMM Match : TTL (HMM E-Value=0) 30 4.1
SB_7977| Best HMM Match : MOZ_SAS (HMM E-Value=3.4e-21) 30 4.1
SB_51790| Best HMM Match : TTL (HMM E-Value=0) 30 4.1
SB_18517| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.5
SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.2
SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.2
SB_44778| Best HMM Match : TPR_2 (HMM E-Value=0.00023) 29 9.6
SB_43621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
>SB_47865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1273
Score = 89.4 bits (212), Expect = 6e-18
Identities = 58/171 (33%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 281 LKISCNGLEARCDSYSFESVRCTFQVDNGC---------WYYEVTIVTPGVMQIGWATKN 331
L +S + LEA +++FES+R T+ V + WYYEV + + G+MQIGW T+
Sbjct: 762 LVLSADRLEAYNMNWTFESIRATYCVGHAMYKASPHPSGWYYEVILKSNGIMQIGWQTEE 821
Query: 332 SHFLNHEGYGIGDDLYSLSYDGCRKLIWYKAKPASVQDLP---EWQPGDILGCLIDLNTR 388
+ G G+GDD +S ++DG R IW P+ Q+ EWQ GD+L CL
Sbjct: 822 CRYGPERGVGVGDDKHSCAFDGARCKIW-SGPPSEQQNNDYGVEWQIGDVLSCLFSWE-G 879
Query: 389 EAIFSLNGRCLTPCTEIFETTRCCKQGXXXXXXXXXXQQCRFNFGHLPFSF 439
+ F LNGR + T+ Q C FNFG +PF +
Sbjct: 880 DVSFWLNGR----DHGVAFTSLNTSINWYPAVSLAMDQHCIFNFGSMPFRY 926
>SB_48080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 314 EVTIVTPGVMQIGWATKNSHFLNHEGYGIGDDLYSLSYDGCRKLIWY-KAKPASVQDLPE 372
+V + G MQ+GWA G G GDD +S +YDG R L W+ AK + +
Sbjct: 110 KVLTFSGGYMQLGWADDGFSAAADTGQGCGDDSHSWAYDGTRTLKWHANAKEPYGR---K 166
Query: 373 WQPGDILGCLIDLNTREAIFSLNGRCLTPCTEIF 406
W+ GD +G +DL+ E FSLNG +P F
Sbjct: 167 WKEGDTVGIAVDLDQGEVSFSLNGDWSSPMGTAF 200
>SB_12174| Best HMM Match : SPRY (HMM E-Value=5.9e-05)
Length = 128
Score = 56.8 bits (131), Expect = 4e-08
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 327 WATKNSHFLNHEGYGIGDDLYSLSYDGCRKLIWYKAKPASVQDLP---EWQPGDILGCLI 383
W T+ + G G+GDD +S ++DG R IW P+ Q+ EWQ GD+L CL
Sbjct: 2 WQTEECRYGPERGVGVGDDKHSCAFDGARCKIW-SGPPSEQQNNDYGVEWQIGDVLSCLF 60
Query: 384 DLNTREAIFSLNGRCLTPCTEIFETTRCCKQGXXXXXXXXXXQQCRFNFGHLPFSF 439
+ F LNGR + T+ Q C FNFG +PF +
Sbjct: 61 SWE-GDVSFWLNGR----DHGVAFTSLNTSINWYPAVSLAMDQHCIFNFGSMPFRY 111
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 44.4 bits (100), Expect = 2e-04
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 293 DSYSFESVRCTFQVDNGCWYYEVTIVTPGVMQIGWATKNSHF---LNHEGYGIGDDLYSL 349
D Y ++ R T V G +YYE T+ G+ ++GW+T ++ + EG+G G
Sbjct: 17 DFYKWQGCRSTLGVKKGKYYYEATVTDEGLCRVGWSTAHATLDLGTDEEGFGFG-GTGKK 75
Query: 350 SYDGCRKLIWYKAKPASVQDLPEWQPGDILGCLIDLNTREAIFSLNG 396
SY+ R+ Y +P + D +GC I+L+ +S NG
Sbjct: 76 SYN--RQFDTY-GEPFGI--------NDTIGCYINLDNGTVKYSKNG 111
>SB_6995| Best HMM Match : DUF740 (HMM E-Value=2.4)
Length = 671
Score = 34.3 bits (75), Expect = 0.25
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 12 EREMYSPTAGPASASMSLSPGDARLRAMKALDPSIVDQLVMEMLTLIASFVDNDEESPVL 71
+ + T P S S G + M L+P V +L + TL + V N PV
Sbjct: 439 DSSQFIDTVDPVSLSKESGSGAQSTQTMSTLNPGSVAELSQSIKTLDSVSVSNQSMDPVD 498
Query: 72 LVKLHV-IADKEEGWLQVVSSM 92
+ V I DKE G Q++ +M
Sbjct: 499 SLSGSVDILDKESGSRQMMDTM 520
>SB_22188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1046
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 73 VKLHVIADKEEGWLQVVSSMVNVIPLDNPLGPSAITIVFDDCPLPSRDSVIKLTKLFRLS 132
+K+ + + EG +++ N + L ++I V D P+P+R+S+ T RL+
Sbjct: 847 IKVENVVESVEGLHKLLRRARNNLILREEKSKASIQSVVADVPIPTRESIASPTTQKRLA 906
Query: 133 RQR 135
RQ+
Sbjct: 907 RQK 909
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 31.1 bits (67), Expect = 2.4
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 11 DEREMYSPTAGPASASMSLSPGDARLRAMKALDPSIVDQLVMEMLTLIASFVDNDEESP- 69
D+ MY T G + SL P LR ++L + + TLI D +ESP
Sbjct: 1777 DQSLMYKSTFGNTGKAFSLDPKTGELRTARSL------RGLQREFTLIIKATDGIQESPD 1830
Query: 70 --VLLVKLHVIADKEEGWLQVVSSMVNVIPLDNPLGPSAITI 109
+++K+ ++ ++ LQ + V+ +D+PL A+ I
Sbjct: 1831 THPVILKISIVGGRQARKLQ---NHVSTKCVDSPLYAKALKI 1869
>SB_23703| Best HMM Match : TTL (HMM E-Value=0)
Length = 657
Score = 30.3 bits (65), Expect = 4.1
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 430 FNFGHLPFSFPPTDRPFMAFNDYARLTDEEKKV-LPRRYYLEKVRNASIPENACTLCYDA 488
FNF L F+ P R F+A +Y++ D K + + + L + R + EN L YD+
Sbjct: 93 FNFAPLSFNLPNDYRKFVA--EYSKKKDATKNIWICKPADLSRGRGIFLFENLLDLTYDS 150
Query: 489 VA 490
A
Sbjct: 151 AA 152
>SB_7977| Best HMM Match : MOZ_SAS (HMM E-Value=3.4e-21)
Length = 570
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 213 RFDKEDVNPLLKLE-KLANNEDYVWRQVGFCAQWALDNLFVIENRPLSYE-TVDMT 266
+F +E N +L +LAN + + + +WA NLF++ NR L VDMT
Sbjct: 450 KFTEEKNNEILNYNNQLANLQTKLEKTQSVAVKWATHNLFMLVNRHLGQTGMVDMT 505
>SB_51790| Best HMM Match : TTL (HMM E-Value=0)
Length = 536
Score = 30.3 bits (65), Expect = 4.1
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 430 FNFGHLPFSFPPTDRPFMAFNDYARLTDEEKKV-LPRRYYLEKVRNASIPENACTLCYDA 488
FNF L F+ P R F+A +Y++ D K + + + L + R + EN L YD+
Sbjct: 93 FNFAPLSFNLPNDYRKFVA--EYSKKKDATKNIWICKPADLSRGRGIFLFENLLDLTYDS 150
Query: 489 VA 490
A
Sbjct: 151 AA 152
>SB_18517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 29.9 bits (64), Expect = 5.5
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 250 LFVIENRPLSYETVDMTPINVILNSHDVSEYLKISC 285
L I N+ +++ +D+ P N+I+NSHDV + C
Sbjct: 183 LEAIHNKNIAH--LDLKPSNIIVNSHDVCKLADFGC 216
>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2070
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 253 IENRPLSYETVDMTPINVILNSHDVSEY---LKISCNGLEARCDSYSFESV 300
+EN P ++ V+ T +N ILN+ Y LK S + + D Y +SV
Sbjct: 1067 VENLPTQFDGVEYTEVNRILNALYKLTYFWVLKFSYSSISTNPDDYEGQSV 1117
>SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 447 MAFNDYARLTDEEKKVLPRRYYLEKVRNASIPENACTLCYDAVADCTLE---PCFHN 500
+ +ND+ +T+ KK R Y+L +++ A +P+ L Y + ++ P F+N
Sbjct: 873 LTWNDH--VTEVTKKASKRLYFLTQLKRAGVPQQELVLFYTSCVRSLMDYTAPVFYN 927
>SB_44778| Best HMM Match : TPR_2 (HMM E-Value=0.00023)
Length = 1016
Score = 29.1 bits (62), Expect = 9.6
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 310 CWYYEVTIVTPGVMQIGWATKNSHFLNHEGYGIGDDLYSLSYD 352
CWYY+V + + V G + H +++ + DD++ SYD
Sbjct: 194 CWYYDVHLTSDDVHLTG---DDVHLTSYDVHLTSDDVHLTSYD 233
>SB_43621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 29.1 bits (62), Expect = 9.6
Identities = 18/95 (18%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 184 NFEPCIVLFALIALEKFAHTTENKLVIRSRFDKEDVNPLLKLEKLANNEDY-VWRQVGFC 242
+F+ + L + + ++ R++ ++ NPL KL+ ++ Y + R+
Sbjct: 186 SFKQVMTLVVIFVFHSQSSGAKDTYASRAKVKTQNTNPLKKLQHSLEDQIYSILRKARLL 245
Query: 243 AQWALDNLFVIENR----PLSYETVDMTPINVILN 273
+ +LF + + + T PIN++LN
Sbjct: 246 GSLSSSSLFTVSSNHAFVHVQPNTASFDPINILLN 280
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.137 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,779,683
Number of Sequences: 59808
Number of extensions: 773127
Number of successful extensions: 1400
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1389
Number of HSP's gapped (non-prelim): 17
length of query: 546
length of database: 16,821,457
effective HSP length: 86
effective length of query: 460
effective length of database: 11,677,969
effective search space: 5371865740
effective search space used: 5371865740
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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