GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000742-TA|BGIBMGA000742-PA|IPR003877|SPla/RYanodine
receptor SPRY, IPR001870|B302, (SPRY)-like
         (546 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   3.9  
AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione S-tran...    25   6.9  
AY825864-1|AAV70427.1|  161|Anopheles gambiae voltage gated sodi...    24   9.1  
AY825863-1|AAV70426.1|  161|Anopheles gambiae voltage gated sodi...    24   9.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   9.1  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.4 bits (53), Expect = 3.9
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 109 IVFDDCPLPSRDSVIKLTKLFRLSRQRAL 137
           +  DDCP P   S+++L      ++ + L
Sbjct: 108 LTIDDCPFPHHQSILQLVSFLGTTQVKVL 136


>AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione
           S-transferase E5 protein.
          Length = 230

 Score = 24.6 bits (51), Expect = 6.9
 Identities = 7/23 (30%), Positives = 16/23 (69%)

Query: 262 TVDMTPINVILNSHDVSEYLKIS 284
           ++D+ PIN++   H   E+L+++
Sbjct: 31  SLDIVPINLLAGDHRTDEFLRLN 53


>AY825864-1|AAV70427.1|  161|Anopheles gambiae voltage gated sodium
           channel protein.
          Length = 161

 Score = 24.2 bits (50), Expect = 9.1
 Identities = 10/34 (29%), Positives = 21/34 (61%)

Query: 173 TLDFLLAFLDTNFEPCIVLFALIALEKFAHTTEN 206
           ++ +LLA+L  +F   I ++  + LE ++  TE+
Sbjct: 15  SITYLLAYLVISFLIVINMYIAVILENYSQATED 48


>AY825863-1|AAV70426.1|  161|Anopheles gambiae voltage gated sodium
           channel protein.
          Length = 161

 Score = 24.2 bits (50), Expect = 9.1
 Identities = 10/34 (29%), Positives = 21/34 (61%)

Query: 173 TLDFLLAFLDTNFEPCIVLFALIALEKFAHTTEN 206
           ++ +LLA+L  +F   I ++  + LE ++  TE+
Sbjct: 15  SITYLLAYLVISFLIVINMYIAVILENYSQATED 48


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 9.1
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 4/85 (4%)

Query: 434 HLPFSFPPTDRPFMAFNDYARLTDEEKKVLPRRYYLEKVRNA-SIPENACTLC---YDAV 489
           H P  +P TD      +D+ R+T EE + +     + K      IP  A  +    Y  V
Sbjct: 414 HPPVYWPETDDVDSGASDFDRVTPEELQEIAAHMAIRKAPGLDGIPNAAVKVAIEKYPGV 473

Query: 490 ADCTLEPCFHNDTSSGNGSPRRLTL 514
                + C +  T       +RL L
Sbjct: 474 FCRVYQDCLNTGTFPQQWKRQRLVL 498


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.137    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,686
Number of Sequences: 2123
Number of extensions: 23220
Number of successful extensions: 80
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 76
Number of HSP's gapped (non-prelim): 5
length of query: 546
length of database: 516,269
effective HSP length: 67
effective length of query: 479
effective length of database: 374,028
effective search space: 179159412
effective search space used: 179159412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 50 (24.2 bits)