GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000741-TA|BGIBMGA000741-PA|undefined
         (157 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1388|AAF46537.1|   82|Drosophila melanogaster CG15250-P...    38   0.006

>AE014298-1388|AAF46537.1|   82|Drosophila melanogaster CG15250-PA
           protein.
          Length = 82

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 17/53 (32%), Positives = 28/53 (52%)

Query: 65  SLDFPGSLFGPSVSLLIRTTKIIGDVVQNSAVRYQSFLRLFRPLFRGPFEIKG 117
           SL+ P  L   S+  +   +K +  ++ NSA RY  F+  F+P+F     +KG
Sbjct: 5   SLELPSELLNKSLVTVTNISKSLSRLILNSARRYSRFVLFFKPVFGDALVVKG 57


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.326    0.140    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,569,843
Number of Sequences: 52641
Number of extensions: 129462
Number of successful extensions: 277
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 276
Number of HSP's gapped (non-prelim): 1
length of query: 157
length of database: 24,830,863
effective HSP length: 79
effective length of query: 78
effective length of database: 20,672,224
effective search space: 1612433472
effective search space used: 1612433472
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 58 (27.5 bits)