Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000740-TA|BGIBMGA000740-PA|undefined
         (86 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10117-1|AAA62202.1|  312|Homo sapiens endothelial-monocyte acti...    29   2.3  
CR542281-1|CAG47076.1|  312|Homo sapiens SCYE1 protein.                29   2.3  
BC014051-1|AAH14051.1|  312|Homo sapiens small inducible cytokin...    29   2.3  

>U10117-1|AAA62202.1|  312|Homo sapiens endothelial-monocyte
          activating polypeptide II protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 50 KRLDSKAAKAVKLFDYLGCQVSLTKNQLV 78
          KRL+ K A+A ++ +YL  QVSL K + +
Sbjct: 9  KRLEQKGAEADQIIEYLKQQVSLLKEKAI 37


>CR542281-1|CAG47076.1|  312|Homo sapiens SCYE1 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 50 KRLDSKAAKAVKLFDYLGCQVSLTKNQLV 78
          KRL+ K A+A ++ +YL  QVSL K + +
Sbjct: 9  KRLEQKGAEADQIIEYLKQQVSLLKEKAI 37


>BC014051-1|AAH14051.1|  312|Homo sapiens small inducible cytokine
          subfamily E, member 1 (endothelial monocyte-activating
          protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 50 KRLDSKAAKAVKLFDYLGCQVSLTKNQLV 78
          KRL+ K A+A ++ +YL  QVSL K + +
Sbjct: 9  KRLEQKGAEADQIIEYLKQQVSLLKEKAI 37


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.133    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,622,068
Number of Sequences: 224733
Number of extensions: 171605
Number of successful extensions: 210
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 207
Number of HSP's gapped (non-prelim): 3
length of query: 86
length of database: 73,234,838
effective HSP length: 64
effective length of query: 22
effective length of database: 58,851,926
effective search space: 1294742372
effective search space used: 1294742372
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)