GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000740-TA|BGIBMGA000740-PA|undefined
         (86 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   1.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   1.6  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 1.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 9   GDVESISIISEREGVQARRDG 29
           GDV SI  + E   V+  RDG
Sbjct: 133 GDVGSIVYVMEEGKVEVSRDG 153


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
          protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 9/25 (36%), Positives = 11/25 (44%)

Query: 60 VKLFDYLGCQVSLTKNQLVHWFNIW 84
          VK F    C V  +    + WF IW
Sbjct: 11 VKSFRESRCSVRCSAASGLRWFEIW 35


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.133    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,498
Number of Sequences: 429
Number of extensions: 456
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 86
length of database: 140,377
effective HSP length: 48
effective length of query: 38
effective length of database: 119,785
effective search space:  4551830
effective search space used:  4551830
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
S2: 37 (19.0 bits)