Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000737-TA|BGIBMGA000737-PA|undefined
         (194 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.52 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.52 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   2.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 0.52
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 3   KTHIKDTRLAQNVLDKSRNVVSTIKALQRWHK-ITESLKRLRASKKTSRFADDIDFENSV 61
           KT   D R+  N+LDK     ST K    +   I   ++  +   K  +    +D +N++
Sbjct: 403 KTDSSDNRILNNLLDK--KPYSTYKFPTNFDALIVNEMRSEKPESKKDKKGSQVDHKNNL 460

Query: 62  ANLEN 66
            + +N
Sbjct: 461 GDSKN 465


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.52
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 3   KTHIKDTRLAQNVLDKSRNVVSTIKALQRWHK-ITESLKRLRASKKTSRFADDIDFENSV 61
           KT   D R+  N+LDK     ST K    +   I   ++  +   K  +    +D +N++
Sbjct: 295 KTDSSDNRILNNLLDK--KPYSTYKFPTNFDALIVNEMRSEKPESKKDKKGSQVDHKNNL 352

Query: 62  ANLEN 66
            + +N
Sbjct: 353 GDSKN 357


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 31  RWHKITESLKRL-RASKKTSRFADDIDFENSVANLEN 66
           R+  I + ++ L   S+K +RF  ++ F N + +L N
Sbjct: 199 RFRVINDGIQALINDSRKVTRFPTELTFCNKIKHLVN 235


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 22  VVSTIKALQRWHKITESLKRLRASKKTSRF 51
           VV+T    + W ++ ++L+     KKT R+
Sbjct: 84  VVTTFYKRRTWTRLLKNLESCAKIKKTKRY 113


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.124    0.320 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,630
Number of Sequences: 317
Number of extensions: 811
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 194
length of database: 114,650
effective HSP length: 54
effective length of query: 140
effective length of database: 97,532
effective search space: 13654480
effective search space used: 13654480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 41 (20.6 bits)