Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000737-TA|BGIBMGA000737-PA|undefined
(194 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 37 0.002
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 35 0.007
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 33 0.036
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 32 0.048
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 32 0.064
SPAC9.13c |cwf16|SPAPJ735.01c|splicing factor |Schizosaccharomyc... 31 0.084
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 30 0.26
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.45
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 29 0.59
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 28 1.0
SPAC2F7.05c |||translation initiation factor eIF5 |Schizosacchar... 27 1.4
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 27 1.4
SPBC1773.16c |||transcription factor |Schizosaccharomyces pombe|... 27 2.4
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 2.4
SPCC1884.02 |nic1|SPCC757.01|NiCoT heavy metal ion transporter N... 26 3.2
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |... 26 3.2
SPBC13A2.03 |||phosphatidate cytidylyltransferase|Schizosaccharo... 26 3.2
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 26 4.2
SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomy... 26 4.2
SPAC18G6.15 |mal3||EB1 family Mal3|Schizosaccharomyces pombe|chr... 25 5.5
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 25 5.5
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 5.5
SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 25 5.5
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 25 5.5
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 25 5.5
SPAC17G6.09 |sec62||ER protein translocation subcomplex subunit ... 25 5.5
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 7.3
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 25 9.7
SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces ... 25 9.7
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 25 9.7
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 25 9.7
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 99 TEKRIARRLEDNSLTKWTALKSGEEESAAAQRAKVTRARLSDLEDEMSELNERSAAREKR 158
TEK + +R+ED + + EE A + + +D +DE+ EL ER +E+R
Sbjct: 134 TEKILQKRIEDLLYERQNHQQQLEEVLATVDQLQSLVTNFNDQQDEVDELRERITLKEER 193
Query: 159 VARLR 163
+ ++R
Sbjct: 194 IQQMR 198
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 35.1 bits (77), Expect = 0.007
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 84 EVSSARRALQDN-EERTEKRIARRLEDNSLTKWTALKSGEEESAAAQRAKVTRARLSDLE 142
E+ A AL++ +E+ EK LE+ T + L+ +E+A A R +ARL DL+
Sbjct: 44 ELKQAIEALREKAKEKKEKERILALEEKK-TNYKILQKSNDETAQAMRKMQDQARLRDLQ 102
Query: 143 DEMSELNERSAAREKRVARL 162
+ E + R+K +A +
Sbjct: 103 KIRQQKAEDAEQRKKILAEI 122
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 32.7 bits (71), Expect = 0.036
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
Query: 37 ESLKRLRASKKTSRFADDIDFENSVANLENRMRISDKILESVGIGHSEVSSARRALQDNE 96
+S+K+ + SKK + + + E+S + E+ S+ SE SS+ + ++E
Sbjct: 69 KSVKKQKKSKKKEESSSESESESSSSESESSSSESES-----SSSESESSSSESSSSESE 123
Query: 97 ERTEKRIARRLEDNSLTKWTALKSGEEESAAAQRAKVTRARLSDLEDEMSELNERSAARE 156
E + + E +S + ++ EEE+ K + S E SE S++ E
Sbjct: 124 EEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSE 183
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 32.3 bits (70), Expect = 0.048
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 115 WTALKSGEEESAAAQR-AKVTRARLSDLEDEMSELNERSAAREKRVARLR 163
W + ++ +EE A ++ A+ + +L+ ++SEL + A++K VA L+
Sbjct: 29 WYSTEAAKEEKPAEEKVAETENVDVKELQSKLSELKSKYEAKDKEVAELK 78
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 31.9 bits (69), Expect = 0.064
Identities = 30/160 (18%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 7 KDTRLA--QNVLDKSRNVVSTIKALQRWHKITESLKRLRASKKTSRFADDIDF-ENSVAN 63
+ TRL Q+ L++ +N + T+ +R + L + + K A+++ + +N
Sbjct: 811 ESTRLQELQSQLNQDKNQIETLN--ERISAAADELSSMESINKNQ--ANELKLAKQKCSN 866
Query: 64 LENRMRISDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLEDNSLTKWTALKSGEE 123
L+ ++ +K+ + H+E S+ + +T +++ L+ ++ +LKS
Sbjct: 867 LQEKINFGNKLAKE----HTEKISSLEKDLEAATKTASTLSKELKTVK-SENDSLKSVSN 921
Query: 124 ESAAAQRAKVTRARLSDLEDEMSELNERSAAREKRVARLR 163
+ +++ V + ++ ++E NE+ AR++ + RL+
Sbjct: 922 DDQNKEKS-VNNEKFKEVSQALAEANEKLNARDEEIERLK 960
>SPAC9.13c |cwf16|SPAPJ735.01c|splicing factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 31.5 bits (68), Expect = 0.084
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 82 HSEVSSARRALQDNEERTEKRIARRLEDNSLTKWTALKSGEEESAAAQRAKVTRARLSDL 141
H++ ++ A ++ E EKR+ + E+N L + + +E Q+ T+ ++ +
Sbjct: 99 HADYAAESGASRNYEPWHEKRL-QEYEENELAERNDIPEEDEMEKLEQKTLDTKRQMQ-I 156
Query: 142 EDEMSELNERSAAREK 157
D + EL E+SA R +
Sbjct: 157 SDALDELREKSARRSR 172
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 29.9 bits (64), Expect = 0.26
Identities = 20/88 (22%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 65 ENRMRISDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLEDNSLTKWTALKSGEEE 124
E +R +KIL+ + + E + ++ + T K++ RR+ + + A+K E E
Sbjct: 315 EKILRFKEKILDLLEMKQQEENDRISHIEYENDLTVKKLKRRISELEM----AVKEYESE 370
Query: 125 SAAAQR---AKVTRARLSDLEDEMSELN 149
+ +++ K++ R+ +LED+++E++
Sbjct: 371 KSYSEKEYEEKISSLRI-ELEDKLAEID 397
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.1 bits (62), Expect = 0.45
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 102 RIARRLEDN--SLTKWTALKSGEEESAAAQRAKVTRARLSDLEDEMSELNERSAAREKRV 159
R R LED+ SL K +KS ES V +AR ++LEDE+S ++ R+ R
Sbjct: 1646 RTLRSLEDSVASLQKECKIKSNTVESLQDVLTSV-QARNAELEDEVSRSVDKIRRRDDRC 1704
Query: 160 ARL 162
L
Sbjct: 1705 EHL 1707
Score = 28.3 bits (60), Expect = 0.79
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 58 ENSVANLENRMRISDKILESVGIGHSEVSSARRALQDNEERTEKRIARR 106
E+SVA+L+ +I +ES+ + V + L+D R+ +I RR
Sbjct: 1652 EDSVASLQKECKIKSNTVESLQDVLTSVQARNAELEDEVSRSVDKIRRR 1700
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 28.7 bits (61), Expect = 0.59
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 7/41 (17%)
Query: 29 LQRWH-KITESLKRLRASKKT------SRFADDIDFENSVA 62
L+ WH K SL++ R K S F DD+DFENS++
Sbjct: 114 LEEWHQKFWWSLRKKRNLPKENSELDLSNFQDDLDFENSIS 154
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 27.9 bits (59), Expect = 1.0
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 9/105 (8%)
Query: 34 KITESLKRLRASKKTSRFAD-DIDFENSVANLENRMRISDKILESVGIGHSEVSSARRAL 92
++TE L+R + S + R D+ +V + + K ++ A RA+
Sbjct: 247 RLTEVLERQQRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQA------RAQKANRAV 300
Query: 93 QDNEERTEKRIARRLEDNSLTKWTALKSGEEES--AAAQRAKVTR 135
EK RR E N+ + ALK +EE+ +AK TR
Sbjct: 301 LAYHSHIEKEEQRRAERNAKQRLQALKENDEEAYLKLIDQAKDTR 345
>SPAC2F7.05c |||translation initiation factor eIF5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 395
Score = 27.5 bits (58), Expect = 1.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 94 DNEERTEKRIARRLEDNSLTKWTALKSGEEESAAAQRAKVTRARLSDLEDEMSE 147
+ E+ E + RR+ + TA +E+ A + RAR+ +LE M +
Sbjct: 163 EEEDGAEDELTRRIRQEAAELPTAEVVNDEDWAVDTSEEAVRARVQELEGNMKD 216
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 1 MRKTHIKDTRLAQNVLDKSR 20
+RKTH+ DT L NVLD R
Sbjct: 227 LRKTHLYDTILDNNVLDSVR 246
>SPBC1773.16c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 595
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 54 DIDFENSVANLENRMRISDKILESVGIGHSEVSSARRALQDNEERTE 100
D D EN + L+N ++ DK ++ + + S R+ QD+E + +
Sbjct: 67 DNDEENEINELKNAVKALDKRFDNFELKLEALFSLLRSQQDSERKVK 113
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 96 EERTEKRIARRLEDNSLTKWTALKSGEEESAAAQRAKVTRARLSD---LEDEMSELNERS 152
++R ++ R+ E L + + E+E ++ K+ ++ + LE E L E+
Sbjct: 82 KQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIRLQEQQ 141
Query: 153 AAREKRVARLR 163
+E+R +LR
Sbjct: 142 RRKEERDQKLR 152
>SPCC1884.02 |nic1|SPCC757.01|NiCoT heavy metal ion transporter
Nic1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 405
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 50 RFADDIDFENSVANLENRMRISDKILESVG----IGHSEV 85
R A D D ++ NL R+ +DK + +VG IGHS V
Sbjct: 75 RHALDADHITAIDNLTRRLLSTDKPMSTVGTWFSIGHSTV 114
>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 661
Score = 26.2 bits (55), Expect = 3.2
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Query: 45 SKKTSRFADDIDFENSVANLENRMRISDKILESVGIGHSEVSSARRALQDNEE--RTEKR 102
S+ S F D+D ++ N N + +I ESV H + + + +++ + E
Sbjct: 424 SETVSGFKHDVDVYDTAENEGNNTLL--QIKESV---HEKTPTQDEPMDISQDTIKQEDY 478
Query: 103 IARRLEDNSLTKWTALKSGEEESAAAQRAKVTR-ARLSDLEDEMSELNERSAAREKRVAR 161
+LE +S +K ++ + +EE AA+ A ++ R DE + EK A
Sbjct: 479 YEPKLEQHSSSKRNSISTRKEEDAASALANLSAVGRSISAVDESAHQGHLPGWDEKEEAL 538
Query: 162 LRAL 165
+ +L
Sbjct: 539 IFSL 542
>SPBC13A2.03 |||phosphatidate
cytidylyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 66 NRMRISDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLEDNSLTK--WTALKSG 121
N+ SDK +VG+ ++ S++ + + K +AR+ N +T+ WT L G
Sbjct: 7 NKRNNSDKENGNVGVVQNKDSASSKTTEPARLTKHKSLARKPSQNFITRTIWTFLLLG 64
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 25.8 bits (54), Expect = 4.2
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 46 KKTSRFADDIDFENSVANLENRMRISDKILES-VGIGHSEVSSARRALQDNEERTEKRIA 104
++ +F DDI S+ + K LE V + + ++ NEER E+
Sbjct: 129 ERLQQFDDDIQKRESLLETYTLLDAQRKDLEEKVLLSQDRKLESEAIIKQNEERNEEMFQ 188
Query: 105 RRLEDNSL 112
+ED L
Sbjct: 189 SLIEDKRL 196
>SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 756
Score = 25.8 bits (54), Expect = 4.2
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 14/75 (18%)
Query: 74 ILESVGIGHSEVSSARRALQDNEERTEKRIARRLEDNS-LTKWTALKSGEEESAAAQRAK 132
+LE G+G S++SS + D ++T +LE++S + K+ + + E++A
Sbjct: 677 LLELKGVGKSDISSFLQQFSDFVKKTP-----QLEESSPIFKYLTINTAVEQAA------ 725
Query: 133 VTRARLS-DLEDEMS 146
TR+RLS DL E S
Sbjct: 726 -TRSRLSLDLAPESS 739
>SPAC18G6.15 |mal3||EB1 family Mal3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 120 SGEEESAAAQRAKVTRARLSDLEDEMSELNERSAAREK 157
S +AA RAK + +++ LE ++ E+NE E+
Sbjct: 163 SSTANTAAVLRAKQAQQQITSLETQLYEVNETMFGLER 200
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 25.4 bits (53), Expect = 5.5
Identities = 15/80 (18%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 83 SEVSSARRALQDNEERTEKRIARR-------LEDNSLTKWTALKSGEEESAAAQRAKVTR 135
S++++ R+ L++ ++ ++ + ++ L T+ L G+EE+ Q+ +
Sbjct: 41 SKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKHATERQKLDKGDEETNETQQEDLLN 100
Query: 136 ARLSDLEDEMSELNERSAAR 155
L +ED E+S+ +
Sbjct: 101 TLLQQMEDTKITTAEKSSVQ 120
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 25.4 bits (53), Expect = 5.5
Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 83 SEVSSARRALQDNEERTEKRIARRLEDNSLTKWTALKSGEEESAAAQRAKVTRARLSDLE 142
S++ S + + DN+ R K + +RL ++ L G E+ + +V +A+ +E
Sbjct: 62 SKLLSNQVSQNDNDAR--KNLRKRLRNDVLKDLAEEIQGCEKKLESLYEEVAKAKAKAVE 119
Query: 143 DEMS-ELNERSAAREKRVARLRA 164
D+++ E ++ A + K A + A
Sbjct: 120 DQLALEEADKEAKKAKTEAPVEA 142
>SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 182
Score = 25.4 bits (53), Expect = 5.5
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 30 QRWHKITESLKRLRASKKTSR--FADDIDFENSVANLENRMRISDKILESVGIGHSEVSS 87
QR +IT K + +KT ++D+ + I D +L+S +S +SS
Sbjct: 59 QRIRQITAKDKTVNLLRKTLNRPLLHEVDYHGK------SLEILDMLLQS---RNSMISS 109
Query: 88 ARRALQDNEERTEKRIARRLED 109
R LQ+ ++ +K+ +LE+
Sbjct: 110 LRSELQEKNQKDKKKEVNKLEE 131
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 25.4 bits (53), Expect = 5.5
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 55 IDFENSVANLENRMRISD---KILESVGIGHSE-VSSARRALQDNEERTE--KRIARRLE 108
++++ V N+ N +S+ K+ ++ + E S+ RA + E+ E K + E
Sbjct: 226 LEWKEKVYNVSNNTLLSEAHYKLALALEFTNPEDPSNKSRACEHVEKAAEILKNVLNERE 285
Query: 109 DNSLTKWTALKSGEEESAAAQRAKVTRARLSDLEDEMSELNERSAAREKRV 159
+ K K EES + R LS+LE + +L + + E+ V
Sbjct: 286 NEVTDKKGKGKQKAEESTLTSDLENLREMLSELEQKTLDLKHGAPSLEEAV 336
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.4 bits (53), Expect = 5.5
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 95 NEERTEKRIARRLEDNSLTKWTALKSGEEESAAAQRAKV------TRARLSDLEDEMSEL 148
+ E+T++ + + LED K + ++ E E AA +RA + T A SD E +L
Sbjct: 898 HREKTQEGLNKVLEDLETKKASDVQLTEAEKAAERRANLANKMFDTLANASDDEAPKLKL 957
Query: 149 NERSAA 154
+ S A
Sbjct: 958 GDASVA 963
>SPAC17G6.09 |sec62||ER protein translocation subcomplex subunit
Sec62 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 273
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 25 TIKALQRWHKITESLKRLRASKKTSRFA 52
+ K L WH +K+ R SKK S+ A
Sbjct: 212 SFKPLWSWHNSKSEVKKTRKSKKLSKKA 239
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 143 DEMSELNERSAAREKRVARL 162
D+ S+LNE SA EKR+ L
Sbjct: 1052 DQTSQLNEESAYLEKRIQTL 1071
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 74 ILESVGIGHSEVSSARRALQDNEERTEKRIARRL 107
+LE V ++S AR +Q +E + KR+ RRL
Sbjct: 902 LLEEVKDLKKKLSKARSIMQLDELNSRKRVLRRL 935
>SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 797
Score = 24.6 bits (51), Expect = 9.7
Identities = 26/135 (19%), Positives = 56/135 (41%), Gaps = 10/135 (7%)
Query: 37 ESLKRLRASKKTSRFADDIDFENSVANLENR-------MRISDKILESVGIGHSEVSSAR 89
E ++++A+K+ + ADD+ +S+ L+N+ I + G G +
Sbjct: 70 EKSEQVKANKQVT--ADDLLEAHSIPQLKNKNDEVSQAKNIPKMKFNTTGFGAKMLEKMG 127
Query: 90 RALQDNEERTEKRIARRLEDNSLTKWTALKSGEEESAAAQRAKVTRARLSDLEDEMSELN 149
+ IA ++ + L + E + ++ + R +SD EDE +
Sbjct: 128 YKQGQGLGANAEGIAEPVQSKLRPERVGLGAVRERTEKQRKEAIARGEISDSEDEKHTVK 187
Query: 150 ERSAAREKRVARLRA 164
++ REK+ L++
Sbjct: 188 QK-PLREKKKKPLKS 201
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 114 KWTALKSGEEESAAAQRAKVTRARLSDLEDEMSELNE 150
+W AL + EEES AA R + R ++ + NE
Sbjct: 151 EWEALYNEEEESDAATRRLMKRQNQRQIQYCIQRYNE 187
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 24.6 bits (51), Expect = 9.7
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Query: 23 VSTIKALQRWHKITESL-KRLRASKKTSRFADDIDFENSVANLENRMRISDKILESVGIG 81
V T K +R K E L K+ + +KK +D + V++ + ++ +S G
Sbjct: 177 VKTKKEKEREKKEREKLRKKQQQAKKKGSTGEDTLASSEVSSEVDISTPAEN--DSSAKG 234
Query: 82 HSEVSSARRA--LQDNEERTEKRIARRLEDNSLTKWTALKSGEEESAA-AQRAKVTRARL 138
S R+ + ++ E++ AR E+ + + A + EE+ A + A+ ARL
Sbjct: 235 KQAAGSKRKGPNVTALQKMLEEKRAREEEEQRIREEEARIAEEEKRLAEVEEARKEEARL 294
Query: 139 SDLEDEMSELNERSA 153
E E + E A
Sbjct: 295 KKKEKERKKKEEMKA 309
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.124 0.320
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,801
Number of Sequences: 5004
Number of extensions: 21909
Number of successful extensions: 122
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 104
Number of HSP's gapped (non-prelim): 35
length of query: 194
length of database: 2,362,478
effective HSP length: 69
effective length of query: 125
effective length of database: 2,017,202
effective search space: 252150250
effective search space used: 252150250
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)
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