Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000736-TA|BGIBMGA000736-PA|undefined
         (99 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   2.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   2.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   4.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   4.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    20   4.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     19   7.3  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           19   7.3  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    19   7.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    19   7.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    19   7.3  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    19   9.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 14  DCNYNKGESYYRPVLDRLDGKAPIVREPERESIRA 48
           D +  +G    +PV D  D  AP + + E  ++ A
Sbjct: 509 DTSLVRGRLVAKPVADARDAPAPFLLKRENYTLPA 543


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%)

Query: 25  RPVLDRLDG-KAPIVREPERESIRADVDNRIK 55
           RP L  ++G K   ++E   E++RA VDNR K
Sbjct: 468 RPAL--IEGWKVEKIQEIYLEALRAYVDNRRK 497


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 72  RGARAQRGRPLSSALEDDEFNEDA 95
           R    +R  PL+  + DD FN  A
Sbjct: 288 RSYAPERYPPLAQGVNDDAFNSVA 311


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 23  YYRPVLDRLDGKAPIVREPERESIRADVDNRIKSALHDMETPND 66
           YY+P+      +   +R+ E  S  + V +++K   + +E  ++
Sbjct: 134 YYKPIKTLNGHEIKFIRKEEYISFESKVFHKLKKMKYLVEVQDE 177


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory
          receptor candidate 22 protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 49 DVDNRIKSALHDMETPN 65
          +VDN++K    D++ PN
Sbjct: 34 EVDNQLKQMGCDLDIPN 50


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1
          protein.
          Length = 697

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)

Query: 13 YDCNYNKGESY 23
          YDC YN  + Y
Sbjct: 74 YDCPYNTQDCY 84


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 22 SYYRPVLDRLDGKAPIVREPERESI 46
          S  +P    +  K P+   PER S+
Sbjct: 35 SITQPTKTVIQSKRPLAPAPERTSV 59


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 290

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 70 DFRGARAQRGRPLSSALED 88
          D R A+  RGR ++ AL +
Sbjct: 40 DIRTAKFARGRSINMALSN 58


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 445

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 70 DFRGARAQRGRPLSSALED 88
          D R A+  RGR ++ AL +
Sbjct: 40 DIRTAKFARGRSINMALSN 58


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 445

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 70 DFRGARAQRGRPLSSALED 88
          D R A+  RGR ++ AL +
Sbjct: 40 DIRTAKFARGRSINMALSN 58


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase
          like protein E4 protein.
          Length = 138

 Score = 19.0 bits (37), Expect = 9.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 19 KGESYYRPVLDRLDGKAPIVREP 41
          +G  Y +P L  L  KAP   EP
Sbjct: 2  EGMPYAQPPLGPLRFKAPQPAEP 24


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.136    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,406
Number of Sequences: 317
Number of extensions: 718
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 99
length of database: 114,650
effective HSP length: 48
effective length of query: 51
effective length of database: 99,434
effective search space:  5071134
effective search space used:  5071134
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.8 bits)
S2: 37 (19.0 bits)