Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000736-TA|BGIBMGA000736-PA|undefined
(99 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082) 29 0.47
SB_41580| Best HMM Match : CAP_GLY (HMM E-Value=4.1e-28) 29 0.47
SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.63
SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0) 29 0.83
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.9
SB_36933| Best HMM Match : TNFR_c6 (HMM E-Value=0.93) 27 1.9
SB_8603| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.9
SB_48008| Best HMM Match : M (HMM E-Value=0.0068) 27 1.9
SB_8966| Best HMM Match : SAP (HMM E-Value=1.6e-08) 27 1.9
SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.3
SB_15625| Best HMM Match : E1_dh (HMM E-Value=0) 27 3.3
SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.8
SB_15300| Best HMM Match : HemolysinCabind (HMM E-Value=8.9) 25 7.7
>SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)
Length = 478
Score = 29.5 bits (63), Expect = 0.47
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 38 VREPERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRPLSSALED 88
V+E R S+ V+ AL DM ++L AR Q+ + L + LED
Sbjct: 72 VKESRRRSVEVQVEIDDDQALQDMHDKLEKLDHMLQARGQQCQELKTRLED 122
>SB_41580| Best HMM Match : CAP_GLY (HMM E-Value=4.1e-28)
Length = 834
Score = 29.5 bits (63), Expect = 0.47
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 38 VREPERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRPLSSALED 88
V+E R S+ V+ AL DM ++L AR Q+ + L + LED
Sbjct: 632 VKESRRRSVEVQVEIDDDQALQDMHDKLEKLDHMLQARGQQCQELKTRLED 682
>SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 29.1 bits (62), Expect = 0.63
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 17 YNKGES-YYRPVLDRLDGKAPIVREPERESIRADVDNRIKSALHDMETP 64
YN ++ YYR L D PI+R R+ RA +D + LH E P
Sbjct: 679 YNAQDTIYYRAALKLRDQGRPIIRAARRQIERAGIDP--VTGLHTKEAP 725
>SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 1127
Score = 28.7 bits (61), Expect = 0.83
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 27 VLDRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRP 81
+L RL G P V++ + E +DN ++ N E DF R+ GRP
Sbjct: 352 MLRRLIGVVPHVKKEDLEYFAEVIDNLNRTPKFRASPWNQEYRDFLAERSSTGRP 406
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 27.9 bits (59), Expect = 1.4
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 28 LDRLDGKAP-IVREPERESIRAD-VDNRIKSALHDMETP-NDELFDFRGARAQRGRPLSS 84
LD LDG + I R + + R D V +++ H +E+ ND A A L S
Sbjct: 529 LDELDGDSSGIKRIQDTANDRYDKVKRDLENKKHHLESDQNDRFIRALDAVATEINKLDS 588
Query: 85 ALEDDEFNED 94
+ DD NED
Sbjct: 589 EIPDDRLNED 598
>SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 32 DGKAPIVREPERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRPLSSALEDDE 90
D +AP + I +D D+ + L D + ND+ + + +R R L+S+ E DE
Sbjct: 1004 DAEAP--SSSRKRVISSDDDDELDEKLDDDDDNNDDEEESKPTPKKRVRQLASSSESDE 1060
>SB_36933| Best HMM Match : TNFR_c6 (HMM E-Value=0.93)
Length = 524
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 31 LDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRPLSSALE 87
LDG A R + + I V R+ AL+D ++ +L D + + + GR +A+E
Sbjct: 297 LDGSANCNRVVKLDCI-GHVQKRMGKALYDFQSATTKLADGKPVKERSGRLTKTAIE 352
>SB_8603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 51 DNRIKSALHDMETPNDELFDFR 72
+N+IK+ HD E ND L DFR
Sbjct: 25 NNKIKTQNHDDEEKNDPLNDFR 46
>SB_48008| Best HMM Match : M (HMM E-Value=0.0068)
Length = 1068
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 32 DGKAPI-VREPERESIRADVDNRIKSALHDMETPNDEL 68
D KA + +R+ ES+ A V N++ A++D+E N+EL
Sbjct: 20 DHKAQLQIRDQNIESLTASV-NKLSLAVNDLEMENEEL 56
>SB_8966| Best HMM Match : SAP (HMM E-Value=1.6e-08)
Length = 696
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 51 DNRIKSALHDMETPNDELFDFR 72
+N+IK+ HD E ND L DFR
Sbjct: 50 NNKIKTQNHDDEEKNDPLNDFR 71
>SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 10 TRVYDCNYNKGESYY-RPVLDRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDEL 68
++ ++ ++++ +S++ +P L +D KAP V ++ + D+E P
Sbjct: 468 SKPHESDHSQNKSHHIKPALP-MDNKAPYVHPNTKQQFQGKPGGEAAREKKDLEKPKRRQ 526
Query: 69 FDFRGARAQRGRPLSSALEDDEFNEDAMV 97
+ R A+ A DE ++D V
Sbjct: 527 RNRRARSAEVSSGTKEAKPSDEGSQDNKV 555
>SB_15625| Best HMM Match : E1_dh (HMM E-Value=0)
Length = 352
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/32 (34%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 38 VREPERESIRADVDNRIKSALHDMETPNDELF 69
+++ E+E+ +A++D ++ A +D E P D+LF
Sbjct: 296 IKKIEQEA-KAEIDEAVECAKNDPEPPLDDLF 326
>SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 25.8 bits (54), Expect = 5.8
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 14 DCNYNKGESYYRPVLDRLDGKAPIVREPERESIRADVDNRIKS 56
D Y+ R L+R + P++R ER + +++ +++S
Sbjct: 88 DDRYDNEIEKMRSPLERTEKMLPVIRSKERSFVSSNIKEKVES 130
>SB_15300| Best HMM Match : HemolysinCabind (HMM E-Value=8.9)
Length = 159
Score = 25.4 bits (53), Expect = 7.7
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 28 LDRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDEL 68
+D LD P ++ +++ I DV+ K+ + E+ +DE+
Sbjct: 85 MDELDFSLPTKKKKKKKKIAIDVEAEAKAIENGTESGDDEV 125
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.136 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,444,059
Number of Sequences: 59808
Number of extensions: 133344
Number of successful extensions: 336
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 323
Number of HSP's gapped (non-prelim): 16
length of query: 99
length of database: 16,821,457
effective HSP length: 71
effective length of query: 28
effective length of database: 12,575,089
effective search space: 352102492
effective search space used: 352102492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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