Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000736-TA|BGIBMGA000736-PA|undefined
(99 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 28 1.1
10_08_0459 + 18092656-18092724,18092827-18092886,18092970-180930... 27 1.8
10_08_0263 - 16311650-16311675,16312101-16312149,16312987-163131... 27 1.8
01_05_0077 + 17928962-17929392,17929472-17929568,17929700-179297... 27 2.4
05_03_0147 - 8895516-8895623,8895751-8895756,8895987-8896118,889... 27 3.2
07_03_1320 - 25791399-25792100 26 4.3
12_01_0107 - 843820-846335,846400-846511 26 5.6
11_01_0107 - 801148-803633,803727-803860,803990-804006,804321-80... 25 7.5
10_08_0260 - 16290798-16290893,16292284-16292570,16293248-162939... 25 7.5
08_02_0210 + 14324539-14324609,14324735-14325740,14325838-143273... 25 7.5
02_02_0701 - 13067547-13067580,13067725-13067864,13068525-130686... 25 7.5
01_05_0694 - 24347642-24348246,24349915-24349993,24350473-243506... 25 7.5
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 25 9.9
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 25 9.9
>05_06_0219 +
26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 31 LDGKAPIVREPERESIRADVDNRIKSALHD-MET 63
+ G P V+E +S ++ + NR K LHD MET
Sbjct: 624 VSGLFPSVQEENTKSSKSSIANRFKGQLHDLMET 657
>10_08_0459 +
18092656-18092724,18092827-18092886,18092970-18093038,
18093134-18093178,18093706-18094332,18094424-18094597,
18094688-18094991,18095070-18095161,18095253-18095319,
18095407-18095478,18095613-18095830,18095979-18096113,
18096225-18096520,18096603-18096774,18096860-18096958,
18097048-18097179,18097273-18097373,18097460-18097649,
18097713-18097751
Length = 986
Score = 27.5 bits (58), Expect = 1.8
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 6 RTRRTRVYDCNYNKGESYYRPVLDRL 31
+ R + DC Y++G+ +Y P++ +L
Sbjct: 852 KDRMLVILDCVYHEGDDFYEPIMTQL 877
>10_08_0263 -
16311650-16311675,16312101-16312149,16312987-16313167,
16313900-16314722,16314749-16314818
Length = 382
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 3 RVGRTRRTRVYDCNYNKGESYY-RPVLDRLDGKAPIVREPERESIRADVDNRIKSALHDM 61
R GR + R+Y+ + GE YY R +L+ G + ++ V + KSA H +
Sbjct: 115 RKGRKKIGRIYNAHPASGERYYLRVILNTAKGCTTF---EDIRTVNGFVHSSYKSACHAL 171
Query: 62 ETPNDE 67
ND+
Sbjct: 172 GFLNDD 177
>01_05_0077 +
17928962-17929392,17929472-17929568,17929700-17929747,
17929833-17929996,17930454-17930469
Length = 251
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 29 DRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELFD 70
D+++ K P + + E ADVDN I+S E ++LFD
Sbjct: 196 DKVEIKVPFIADDEDIEEMADVDNNIESD----EEEEEDLFD 233
>05_03_0147 -
8895516-8895623,8895751-8895756,8895987-8896118,
8896499-8896600,8896822-8896858,8896950-8897242,
8898293-8898418,8898590-8898726,8898818-8898889,
8898972-8899020,8899242-8899312,8899395-8899505,
8899602-8899929,8899999-8900172,8900519-8900578,
8900622-8900861,8900986-8901048,8901123-8901125
Length = 703
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 6 RTRRTRVYDCNYNKGESYYRPVLDRL 31
+ R + D +N+G+ Y+RP+L +L
Sbjct: 641 KDRMLVILDSLHNEGDEYFRPILSQL 666
>07_03_1320 - 25791399-25792100
Length = 233
Score = 26.2 bits (55), Expect = 4.3
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 30 RLDGKAPIVRE-PERESIRADVDNRIKSA-LHDMETPNDELFDFRGARAQRGRPLSSALE 87
R DG VRE +R S+ +V R + + DM + G R + +A
Sbjct: 82 RCDGSPACVRELVDRRSVVFEVRRRRRRRRIRDMVLGPAMASELVGRAEVAWRDVVAAAA 141
Query: 88 DDEFNEDAMVVV 99
DD+ ++DA VVV
Sbjct: 142 DDDDDDDAAVVV 153
>12_01_0107 - 843820-846335,846400-846511
Length = 875
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 25 RPVLDRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELFDFRG 73
+P+LD + + I+ E +ES DVD + +S + D++ + + D G
Sbjct: 345 KPILDEVSKENHILEEDGKESHILDVDGK-ESHILDVDGKQNHILDEDG 392
>11_01_0107 -
801148-803633,803727-803860,803990-804006,804321-804504,
804819-804883
Length = 961
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 25 RPVLDRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELFDFRG 73
+P LD + + I+ E +ES DVD + +S + D++ + + D G
Sbjct: 431 KPTLDEVSKENHILEEDGKESHILDVDGK-ESHILDVDGKQNHILDEHG 478
>10_08_0260 -
16290798-16290893,16292284-16292570,16293248-16293901,
16294999-16295546,16295900-16295961,16296062-16296481
Length = 688
Score = 25.4 bits (53), Expect = 7.5
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 3 RVGRTRRTRVYDCNYNKGESYY-RPVLDRLDGKAPIVREPERESIRADVDNRIKSALHDM 61
R G + R+Y+ + GE YY R +L+ G + ++ V + KSA H +
Sbjct: 396 RKGGMKIGRIYNAHPASGERYYLRVILNTAKGCTTF---EDIRTVNGTVHSSYKSACHAL 452
Query: 62 ETPNDE 67
ND+
Sbjct: 453 GFLNDD 458
>08_02_0210 +
14324539-14324609,14324735-14325740,14325838-14327390,
14327473-14327601,14328345-14328510
Length = 974
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 51 DNRIKSALHDMETPNDELFDFRGARAQRGRPLSSALEDDEFNEDA 95
+ +I S+L ME DE++DF G R + R + LE ++ + A
Sbjct: 219 EEQIGSSLPVME--EDEMYDFLGLRTEDERADQARLEAEKQRDSA 261
>02_02_0701 -
13067547-13067580,13067725-13067864,13068525-13068659,
13068761-13068808,13068834-13068859,13068990-13069057,
13069101-13069112,13070359-13070415,13070817-13070935,
13071700-13071810,13076755-13077066
Length = 353
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 12 VYDCNYNKGESYYRPVLDRLDGKAPIVR-EPER-ESIRADVDNRIKSALHDME 62
+Y C +N G ++ + DR+D ++ +P R + R + ++ L ME
Sbjct: 186 IYFCCFNLGRKHFVCIFDRMDSSLMLITCQPLRPQQARGEEGKQVLQVLGVME 238
>01_05_0694 -
24347642-24348246,24349915-24349993,24350473-24350607,
24351486-24351578,24351801-24351926,24352285-24352332,
24352552-24352653,24353234-24353317,24353754-24353825,
24354136-24354292,24354520-24354563,24354806-24354918,
24355252-24355368,24356330-24356399
Length = 614
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 42 ERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRG 79
+++++RA V+ + +A DM++ + E F+G R RG
Sbjct: 517 DKDALRAAVERQPVAA--DMDSSDPEFRGFKGGRVYRG 552
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 25.0 bits (52), Expect = 9.9
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 5 GRTRRTRVYDCNYNKGESYY-------RPVLDRLDGKAPIVREPERESIRA--DVDNRIK 55
G + T YD N +K + Y LDR + + + R+ + A D+D
Sbjct: 483 GLSPTTNEYDGNSSKSDDYRDSDGEEESETLDRSNRRRRRSQRYTRDFVEAVSDIDPNFD 542
Query: 56 SALHDMETPNDELFDFRGARAQRGRPLSSALEDDE 90
S D E + ++D R ++ + SSA E+DE
Sbjct: 543 S---DDEIMGEAVYDEEYLRTRKQQKTSSASEEDE 574
>02_05_0232 +
27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 25.0 bits (52), Expect = 9.9
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 20 GESYYRPVLDRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRG 79
G + +P+ + D R+ E AD+ R++ AL + + E ++ R
Sbjct: 337 GSAMQQPMYEPDDDHFVSPRKLENSGDDADIYGRLQEALSETQDLKRETYEESTKRRNAE 396
Query: 80 RPLSSALE 87
R L SAL+
Sbjct: 397 RNLISALQ 404
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.136 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,897,378
Number of Sequences: 37544
Number of extensions: 110830
Number of successful extensions: 255
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 249
Number of HSP's gapped (non-prelim): 15
length of query: 99
length of database: 14,793,348
effective HSP length: 71
effective length of query: 28
effective length of database: 12,127,724
effective search space: 339576272
effective search space used: 339576272
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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