GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000736-TA|BGIBMGA000736-PA|undefined
         (99 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    23   2.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    22   4.8  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        21   8.3  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        21   8.3  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        21   8.3  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        21   8.3  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    21   8.3  

>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)

Query: 8   RRTRVYDCNYNKGESYYRPVL 28
           R  R YD  +N GE  YR  L
Sbjct: 484 RMVRKYDVGWNYGELKYRATL 504


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/28 (28%), Positives = 18/28 (64%)

Query: 44  ESIRADVDNRIKSALHDMETPNDELFDF 71
           ES    ++NR+K +++D+ET    + ++
Sbjct: 715 ESQIRGLENRLKYSMNDLETSKKNINEY 742


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 21 ESYYRPVLDRLDGKAPIVREPERESIRADV 50
          ES++ P  +  DG+ P +     + IR  V
Sbjct: 51 ESFFGPFCETKDGEQPALCSSYEDCIRCAV 80


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 21 ESYYRPVLDRLDGKAPIVREPERESIRADV 50
          ES++ P  +  DG+ P +     + IR  V
Sbjct: 51 ESFFGPFCETKDGEQPALCSSYEDCIRCAV 80


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 21 ESYYRPVLDRLDGKAPIVREPERESIRADV 50
          ES++ P  +  DG+ P +     + IR  V
Sbjct: 51 ESFFGPFCETKDGEQPALCSSYEDCIRCAV 80


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 21 ESYYRPVLDRLDGKAPIVREPERESIRADV 50
          ES++ P  +  DG+ P +     + IR  V
Sbjct: 51 ESFFGPFCETKDGEQPALCSSYEDCIRCAV 80


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 21  ESYYRPVLDRLDGKAPIVREPERESIRADV 50
           ES++ P  +  DG+ P +     + IR  V
Sbjct: 627 ESFFGPFCETKDGEQPALCSSYEDCIRCAV 656


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.136    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,278
Number of Sequences: 2123
Number of extensions: 3547
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 99
length of database: 516,269
effective HSP length: 55
effective length of query: 44
effective length of database: 399,504
effective search space: 17578176
effective search space used: 17578176
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)