Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000736-TA|BGIBMGA000736-PA|undefined
(99 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75544-2|CAC42316.1| 480|Caenorhabditis elegans Hypothetical pr... 27 1.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 2.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 2.9
AC024776-22|AAK68478.3| 701|Caenorhabditis elegans Hypothetical... 26 3.9
AC084197-22|AAK68590.2| 1142|Caenorhabditis elegans Suppressor w... 26 5.1
Z83220-2|CAB05701.2| 905|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z75544-1|CAA99881.1| 476|Caenorhabditis elegans Hypothetical pr... 25 6.8
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 25 6.8
Z81094-5|CAB03152.1| 528|Caenorhabditis elegans Hypothetical pr... 25 9.0
Z71264-4|CAA95831.1| 348|Caenorhabditis elegans Hypothetical pr... 25 9.0
Z11505-5|CAA77589.1| 435|Caenorhabditis elegans Hypothetical pr... 25 9.0
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 25 9.0
AL032637-21|CAA21618.2| 612|Caenorhabditis elegans Hypothetical... 25 9.0
AL032635-3|CAB63374.1| 635|Caenorhabditis elegans Hypothetical ... 25 9.0
AL032627-13|CAA21548.1| 118|Caenorhabditis elegans Hypothetical... 25 9.0
AF326942-1|AAG49392.1| 118|Caenorhabditis elegans RNA polymeras... 25 9.0
AF098987-1|AAC67432.1| 276|Caenorhabditis elegans Heparan sulph... 25 9.0
AF038613-9|AAB92053.1| 331|Caenorhabditis elegans Hypothetical ... 25 9.0
>Z75544-2|CAC42316.1| 480|Caenorhabditis elegans Hypothetical
protein K02A11.1b protein.
Length = 480
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 35 APIVREPERESIRADVDNRIKSALHDMETPNDEL--FDFRGARAQRGRPLS 83
A I+R +E + ADV + S H E+P+ + + F+ ++ ++ +P+S
Sbjct: 373 ADILRTWSKEDVSADVHSSQGSLQHQRESPSKRVLKYYFQSSQNKQAKPMS 423
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 26.6 bits (56), Expect = 2.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 62 ETPNDELFDFRGARAQRGRPLSSALEDDEFNE 93
E P+DE F+ R R QRGR + A D E ++
Sbjct: 12381 EYPDDEHFN-RRRRLQRGRRVMEASSDSELDD 12411
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 26.6 bits (56), Expect = 2.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 62 ETPNDELFDFRGARAQRGRPLSSALEDDEFNE 93
E P+DE F+ R R QRGR + A D E ++
Sbjct: 12381 EYPDDEHFN-RRRRLQRGRRVMEASSDSELDD 12411
>AC024776-22|AAK68478.3| 701|Caenorhabditis elegans Hypothetical
protein Y41D4B.4 protein.
Length = 701
Score = 26.2 bits (55), Expect = 3.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 44 ESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRPLSSALEDDEFNE 93
E+ +AD+ + + N E FDFR + R L + L+ F+E
Sbjct: 191 ETWKADLPDEYGKKIEICRRKNCEKFDFRSQKFSRFPRLKNKLKQQHFSE 240
>AC084197-22|AAK68590.2| 1142|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 3 protein.
Length = 1142
Score = 25.8 bits (54), Expect = 5.1
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 39 REPERESIRADVDNRIKSALHDMETPNDEL----FDFRGARAQRGRPLSSALEDDEFNED 94
R +E R D + K+ L+D+++ D L + A +PL DDE +E
Sbjct: 262 RVKRQERSRGDAGDEEKTTLNDLQSELDSLRKMAIEISSAIGVEMKPLKEEASDDEEDEA 321
Query: 95 A 95
A
Sbjct: 322 A 322
>Z83220-2|CAB05701.2| 905|Caenorhabditis elegans Hypothetical
protein C34B7.2 protein.
Length = 905
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 9 RTRVYDCNYNKGESYYRPVLDRLDGKAPIVREPERESIRADV 50
R + C+ + G Y +DR+D KA I EPE + R ++
Sbjct: 16 RFYIIGCD-STGSRYNVLKIDRIDPKALITGEPEYDYTREEI 56
>Z75544-1|CAA99881.1| 476|Caenorhabditis elegans Hypothetical
protein K02A11.1a protein.
Length = 476
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 35 APIVREPERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRPLS 83
A I+R +E + ADV + S H E+P+ + + ++ ++ +P+S
Sbjct: 373 ADILRTWSKEDVSADVHSSQGSLQHQRESPSKRV--LKSSQNKQAKPMS 419
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 25.4 bits (53), Expect = 6.8
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 53 RIKSALHDMETPNDELFDFRGARAQRGRPLSSALEDDEFNEDAMVVV 99
R K+A+ D+E + DF GAR QRG L E + D +V+
Sbjct: 75 RGKAAIVDLERVLELKPDFYGARIQRGNILLKQGELEAAEADFNIVL 121
>Z81094-5|CAB03152.1| 528|Caenorhabditis elegans Hypothetical
protein F58G11.6 protein.
Length = 528
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 65 NDELFDFRGARAQRGRPLSSALEDDEF 91
N++ FDFR QR + EDD+F
Sbjct: 97 NEDGFDFRTVTTQRTEHVYIRTEDDQF 123
>Z71264-4|CAA95831.1| 348|Caenorhabditis elegans Hypothetical
protein K07G5.5 protein.
Length = 348
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 40 EPERESIRADVDNRIKSALHDMETPNDELFD-FRGARAQRGRPLSSALEDDEFNEDAMV 97
E ++E ++++V + + + EL F + G+PL E+DE ED ++
Sbjct: 13 EKKKEVVKSNVSPEAQKKVDEFYNNQKELLQKFDEDQKTIGKPLQKTAEEDERYEDRVL 71
>Z11505-5|CAA77589.1| 435|Caenorhabditis elegans Hypothetical
protein F59B2.8 protein.
Length = 435
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 1 MSRVGRTRRTRVYDCNYN 18
+S +GR RR R++D YN
Sbjct: 411 LSSIGRVRRRRIFDEMYN 428
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
defective protein 45 protein.
Length = 1076
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 39 REPERE--SIRADVDNRIKSALHDMETPNDELFD 70
REP RE S +AD DN +S+ P+D D
Sbjct: 904 REPFREVPSSKADTDNSWRSSAQPTRKPDDRRSD 937
>AL032637-21|CAA21618.2| 612|Caenorhabditis elegans Hypothetical
protein Y43F8C.3 protein.
Length = 612
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 24 YRPVLDRLDGKAPIVREPERESIRADVDNRIKSALHDME 62
+ ++ RLD IV EP E ++ + + +K A+ D E
Sbjct: 227 FSQLMHRLD-PVEIVAEPNEEPVKFEFNTTLKWAIDDFE 264
>AL032635-3|CAB63374.1| 635|Caenorhabditis elegans Hypothetical
protein Y51A2A.5 protein.
Length = 635
Score = 25.0 bits (52), Expect = 9.0
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 41 PERESIR-ADVDNRIKSALHDMETPNDELFDFRGARAQRGRPLSSALEDDEFNEDAMV 97
P+ I+ A + N I+ + +D +FD+ Q G+PL+ E E D ++
Sbjct: 135 PQESHIQEATISNVIEQPAFTDDIRSDAIFDYDSFMIQEGQPLTHYCECIEILADKVL 192
>AL032627-13|CAA21548.1| 118|Caenorhabditis elegans Hypothetical
protein Y41C4A.10 protein.
Length = 118
Score = 25.0 bits (52), Expect = 9.0
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 35 APIVREP--ERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRPLSSALEDDE 90
A I R+P E + D D LHD T +D F A+AQ L L + E
Sbjct: 35 AGITRDPVNHMELWKLDEDGNKSQLLHDTATLSDAGFSSTNAKAQCPAALGLRLTNAE 92
>AF326942-1|AAG49392.1| 118|Caenorhabditis elegans RNA polymerase
II transcriptionfactor SIII p18 subunit protein.
Length = 118
Score = 25.0 bits (52), Expect = 9.0
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 35 APIVREP--ERESIRADVDNRIKSALHDMETPNDELFDFRGARAQRGRPLSSALEDDE 90
A I R+P E + D D LHD T +D F A+AQ L L + E
Sbjct: 35 AGITRDPVNHMELWKLDEDGNKSQLLHDTATLSDAGFSSTNAKAQCPAALGLRLTNAE 92
>AF098987-1|AAC67432.1| 276|Caenorhabditis elegans Heparan
sulphotransferase protein 3 protein.
Length = 276
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 8 RRTRVYDCNYNKGESYYRPVLDRLDGKAPIVRE 40
R T +D NY G +YR + ++ IV E
Sbjct: 81 RETHFFDSNYTLGFDWYRDQMPEVENDNEIVIE 113
>AF038613-9|AAB92053.1| 331|Caenorhabditis elegans Hypothetical
protein F42A6.8 protein.
Length = 331
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 37 IVREPERESIRADVDNRIKSALHDMETPNDELFDFRG 73
++R P ES DV K A+ ++ TPN L +RG
Sbjct: 245 LLRSPSFESATIDVQLLEKEAIENVFTPN-HLLIYRG 280
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.136 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,493,665
Number of Sequences: 27539
Number of extensions: 95881
Number of successful extensions: 215
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 209
Number of HSP's gapped (non-prelim): 18
length of query: 99
length of database: 12,573,161
effective HSP length: 70
effective length of query: 29
effective length of database: 10,645,431
effective search space: 308717499
effective search space used: 308717499
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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