GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000735-TA|BGIBMGA000735-PA|undefined
         (293 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8BU52 Cluster: 2 days pregnant adult female ovary cDNA...    41   0.043
UniRef50_Q58095 Cluster: UPF0027 protein MJ0682 [Contains: Mja h...    36   1.2  
UniRef50_Q5CS16 Cluster: Articulin family protein; n=2; Cryptosp...    34   3.8  
UniRef50_UPI00006CB748 Cluster: hypothetical protein TTHERM_0034...    33   6.6  
UniRef50_UPI000023E496 Cluster: hypothetical protein FG06107.1; ...    33   8.7  

>UniRef50_Q8BU52 Cluster: 2 days pregnant adult female ovary cDNA,
           RIKEN full-length enriched library, clone:E330004G06
           product:Hypothetical serine-rich region containing
           protein, full insert sequence; n=2; Murinae|Rep: 2 days
           pregnant adult female ovary cDNA, RIKEN full-length
           enriched library, clone:E330004G06 product:Hypothetical
           serine-rich region containing protein, full insert
           sequence - Mus musculus (Mouse)
          Length = 482

 Score = 40.7 bits (91), Expect = 0.043
 Identities = 19/47 (40%), Positives = 30/47 (63%)

Query: 220 SKCLLISIQDRFGIYLPRETSFSNKNVTATPNISLEDVSEDVGVDSE 266
           S CL IS+Q R+G  LP +T  ++++ T++   S +DV    G+DSE
Sbjct: 74  SSCLQISLQPRYGGCLPSDTVVADRDSTSSTCASKDDVCSSSGIDSE 120


>UniRef50_Q58095 Cluster: UPF0027 protein MJ0682 [Contains: Mja hyp2
           intein (EC 3.1.-.-)]; n=5; Archaea|Rep: UPF0027 protein
           MJ0682 [Contains: Mja hyp2 intein (EC 3.1.-.-)] -
           Methanococcus jannaschii
          Length = 968

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 18/63 (28%), Positives = 41/63 (65%), Gaps = 3/63 (4%)

Query: 124 VDKAVYQNVDAATLKFDTAYVELQKVVEQAMEIP--VIEIREDIAELLYNSYKMFELNIM 181
           +++AVY+N+D   ++  T + + ++ +E+   I   VI+  ++I E+ Y+S K++++ I+
Sbjct: 512 IERAVYENLDEDDVRISTKFPKFEEFIEKYGVIGGFVIDKIKEIEEISYDS-KLYDVGIV 570

Query: 182 EKE 184
            KE
Sbjct: 571 SKE 573


>UniRef50_Q5CS16 Cluster: Articulin family protein; n=2;
           Cryptosporidium|Rep: Articulin family protein -
           Cryptosporidium parvum Iowa II
          Length = 351

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 137 LKFDTAYVELQKVVEQAMEIPVIEIREDIAELLYNSYK-MFELNIMEKERIAAEIAWE 193
           LK  T +V   +V E+ +E+P I I E I E+    YK +    I+E  +I  EI W+
Sbjct: 83  LKEKTVFVPRVEVQERIVEVPKIVIEEKIVEVPQIQYKEVIMEKILEIPQIQEEIVWK 140


>UniRef50_UPI00006CB748 Cluster: hypothetical protein TTHERM_00348140;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00348140 - Tetrahymena thermophila SB210
          Length = 1997

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 14/48 (29%), Positives = 27/48 (56%)

Query: 245  NVTATPNISLEDVSEDVGVDSERADTKSLVSRKSAVSTKSNVSKLKEK 292
            N+ + PN+ LE++ EDV +D++  D + +  +      K  + K+K K
Sbjct: 1327 NLKSNPNMPLEEIEEDVVIDTQNMDKEEIEDKLREKRLKVALRKVKTK 1374


>UniRef50_UPI000023E496 Cluster: hypothetical protein FG06107.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG06107.1 - Gibberella zeae PH-1
          Length = 706

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 216 NVACSKCLLISIQDRFGIYLPR--ETSFSNKNVTATPNISLEDVSEDVGVDSERADTKSL 273
           NV C+KC L+  Q +      +  E    N+ V    N  LE V  ++ ++ +  D K+L
Sbjct: 357 NVECTKCTLVRTQQQLSAMSKKMQENGSPNEKVLEHLNQRLEAV--ELALEEDDFDDKTL 414

Query: 274 VSRKSAVSTKSNVSKLKEKE 293
            + K  +S ++ VS  K K+
Sbjct: 415 -TEKCKISAQNKVSSTKTKQ 433


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.131    0.356 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,867,151
Number of Sequences: 1657284
Number of extensions: 7676408
Number of successful extensions: 24227
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 24222
Number of HSP's gapped (non-prelim): 8
length of query: 293
length of database: 575,637,011
effective HSP length: 100
effective length of query: 193
effective length of database: 409,908,611
effective search space: 79112361923
effective search space used: 79112361923
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 72 (33.1 bits)