Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000734-TA|BGIBMGA000734-PA|undefined
(113 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0628 + 24589313-24589472,24589604-24589765,24589850-245899... 31 0.16
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342... 29 0.86
02_05_0076 + 25637752-25639062,25639221-25639297,25640962-256410... 29 0.86
04_04_1121 - 31041629-31041793,31041891-31042022,31042255-310424... 28 1.5
11_01_0464 + 3597568-3600244,3600345-3600742 28 2.0
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 28 2.0
03_02_0621 - 9923163-9923245,9924163-9924338,9924437-9924495,992... 27 2.6
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 27 3.5
07_03_0562 + 19535801-19535865,19535972-19536017,19536125-195362... 27 3.5
06_03_0152 + 17287133-17287490,17288541-17288734,17289349-172895... 27 3.5
03_06_0518 - 34474776-34474865,34475168-34475437,34475536-344758... 27 3.5
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 26 6.1
10_01_0003 + 46158-46428,46588-46706,46819-46928,48977-49415,495... 26 8.0
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 26 8.0
>02_04_0628 +
24589313-24589472,24589604-24589765,24589850-24589983,
24590108-24590275,24590481-24590562,24590734-24591512
Length = 494
Score = 31.5 bits (68), Expect = 0.16
Identities = 22/78 (28%), Positives = 34/78 (43%)
Query: 23 NEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKG 82
N++ ST ++ E ++ +K G L S GD + +V + + SS KG
Sbjct: 196 NQETSTSNQHEYESNPSDAEPKQKGTPEGLLVSTEGGDQASYVKSSTPTTSSFDSELQKG 255
Query: 83 GVLLKSSDQNMNLTDDDD 100
G L SSD N + D
Sbjct: 256 GNRLDSSDHRGNFSSTTD 273
>05_03_0634 +
16432679-16433076,16433358-16433610,16433993-16434291,
16434553-16434729,16435001-16435621,16435690-16435784,
16436000-16436088,16436185-16436250,16436475-16437026,
16437879-16437953,16438305-16438375,16438456-16438513,
16441506-16442048
Length = 1098
Score = 29.1 bits (62), Expect = 0.86
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 11 TVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDS-SKHVLRNL 69
T T + I +N+ +K+ R +TE NE+K + S+ KG++ +H+ N
Sbjct: 550 TPTRPSTPASIDKLENAPTTKQRSVRTVTERNESKSGRPLIKKMSERKGNARPRHISSNA 609
Query: 70 KSQSSKSVNKA 80
+ S S N +
Sbjct: 610 QLDSPGSANSS 620
>02_05_0076 +
25637752-25639062,25639221-25639297,25640962-25641095,
25641178-25641242,25641431-25641482,25641912-25641994,
25642128-25642221,25642332-25642861
Length = 781
Score = 29.1 bits (62), Expect = 0.86
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 37 VITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQN---- 92
+IT + +++D EL KFKG RN SQ S + + KG L+ +S+ +
Sbjct: 584 IITSADSRIRVIDSFELVCKFKG------FRNTNSQIS-ACSAVKGRYLISASEDSHVYM 636
Query: 93 MNLTDDDDPYVK 104
DD +P K
Sbjct: 637 WRCNDDSEPNTK 648
>04_04_1121 -
31041629-31041793,31041891-31042022,31042255-31042425,
31042521-31042622,31042703-31042807,31043115-31043286,
31043916-31043980,31044179-31044502,31044729-31044846,
31044928-31045011,31045472-31045603,31045714-31046570,
31046735-31046849,31047371-31047481,31047763-31047824
Length = 904
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 33 EESRVITENNET-KKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQ 91
++S V++E E +K V E S GDSS + N +S+S S ++ L S Q
Sbjct: 189 KDSMVVSEKPEKPQKNVPVSENDSS-SGDSSDEEMANDQSESDDSSSEEASEELKIESKQ 247
Query: 92 NMNLTDDD 99
++TD D
Sbjct: 248 GKDMTDMD 255
>11_01_0464 + 3597568-3600244,3600345-3600742
Length = 1024
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 35 SRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQNMN 94
S ++ ++N + DFG ++FK DS+ L L S SS + G + + SD
Sbjct: 843 SNILLDDNMVAHVGDFG--LARFKFDSTTSSLSYLNSTSSLVIKGTIGYIAPECSDGGQV 900
Query: 95 LTDDD 99
T D
Sbjct: 901 STASD 905
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 22 KNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVN 78
K K SK++ R++ ++ET + D S + D SK R KS++S V+
Sbjct: 298 KRRKRDRKSKQKSKRMLESDSETGNVSD-----SSLEDDKSKRHHRGRKSKASSQVS 349
>03_02_0621 -
9923163-9923245,9924163-9924338,9924437-9924495,
9924952-9924984,9925060-9925185
Length = 158
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 30 SKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAK 81
SK S+V + T K+ GE +K+KG + L+N S ++ +AK
Sbjct: 103 SKPVCSKVDIHSYPTFKVFYEGEEVAKYKGPRNVESLKNFVSDEAEKAGEAK 154
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 82 GGVLLKSSDQNMNLTDDDDPYVKNDNI 108
GG +L +S +N+ + DD P V ND I
Sbjct: 586 GGPILSTSGRNVVIDQDDVPKVINDGI 612
>07_03_0562 +
19535801-19535865,19535972-19536017,19536125-19536223,
19536588-19536674,19537545-19537613,19537702-19538710,
19539217-19539365,19539453-19540487,19540488-19541003
Length = 1024
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 26 NSTFSKEEESRVITENNETKKIVDFGELTSKF-KGDSSKHVLRNLKSQSSKSV 77
+S+F KE+ +VI+ N+E ++ F + K SSK L + K K V
Sbjct: 258 SSSFHKEQGRKVISRNSENDRVASFHKQHDKRPTSRSSKDELPSQKKHIRKPV 310
>06_03_0152 +
17287133-17287490,17288541-17288734,17289349-17289557,
17289640-17289742,17290128-17290291,17290554-17290692,
17290908-17291078,17291162-17291298,17291445-17291759,
17291906-17291965,17292372-17292511,17292691-17292788,
17292875-17293387
Length = 866
Score = 27.1 bits (57), Expect = 3.5
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 6 KKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHV 65
K L+ + Y+N ++ ++ + E +V +K+ + GE K K
Sbjct: 109 KTLQGELVYNNAKKARFDDSSNNVESKSEDKV----GNSKQTIQKGERKEKSKSKKGDGK 164
Query: 66 LRNLKSQSSKSVNKAKGGVL 85
L+N+++Q+ S K + VL
Sbjct: 165 LQNVQAQTEASNGKLQSKVL 184
>03_06_0518 -
34474776-34474865,34475168-34475437,34475536-34475831,
34475924-34476013,34476172-34476337,34476399-34476679,
34476881-34477217
Length = 509
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 33 EESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQN 92
+E R+I N + ++ LT+K G + S+S + K+ G +
Sbjct: 291 KEQRIIHRNVRSSNVLLTDTLTAKLAGVGLARMAGGESSESEDTQGKSAAGYVDPEYLST 350
Query: 93 MNLTDDDDPY 102
LTD D Y
Sbjct: 351 YELTDKSDVY 360
>03_02_1010 -
13194002-13194339,13194421-13194573,13194661-13194809,
13194932-13195184,13195282-13195469,13195684-13195841,
13196093-13196307,13196410-13196614
Length = 552
Score = 26.2 bits (55), Expect = 6.1
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 30 SKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKG-----GV 84
SK E + ++ + D E ++ K KH L + KSV A G G
Sbjct: 457 SKAEADGEAMDLDKPSNVADEAEPGTEKKKKKKKHKLEEEPQEQEKSVAHANGDAEENGT 516
Query: 85 LLKSSDQNMNLTDDDDP 101
K +N +++D +P
Sbjct: 517 PKKKKKKNREVSEDAEP 533
>10_01_0003 +
46158-46428,46588-46706,46819-46928,48977-49415,
49511-49633,49805-50106,50143-50350,50729-51448
Length = 763
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 2 DEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITE 40
D F + LK T + G+I K S F++++E ++ E
Sbjct: 333 DAFVELLKRKDTESRVAGVIARAKASEFAQKQEMKMREE 371
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 25.8 bits (54), Expect = 8.0
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 15 DNIVGLIKNEKNSTFSKEE-ESRVITENNETKKIVDF---GELTSKFKGDSSKHVLRNLK 70
+N VG +K E S K + +++ + + E V E ++ + +++ H L NL
Sbjct: 676 ENTVGELKKEVTSLELKIQIQAQELEQKREEADTVHAQLQDERSNHMQKEAALHALENLH 735
Query: 71 SQSSKSVNKAK 81
SQS + N K
Sbjct: 736 SQSQEDFNLVK 746
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.307 0.127 0.333
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,933,107
Number of Sequences: 37544
Number of extensions: 98778
Number of successful extensions: 307
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 301
Number of HSP's gapped (non-prelim): 16
length of query: 113
length of database: 14,793,348
effective HSP length: 73
effective length of query: 40
effective length of database: 12,052,636
effective search space: 482105440
effective search space used: 482105440
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 54 (25.8 bits)
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