Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000734-TA|BGIBMGA000734-PA|undefined
(113 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g22400.1 68418.m02613 rac GTPase activating protein, putative... 34 0.019
At4g26630.1 68417.m03837 expressed protein 32 0.078
At3g28770.1 68416.m03591 expressed protein 31 0.14
At1g69610.1 68414.m08006 expressed protein 31 0.18
At4g09950.1 68417.m01628 avirulence-responsive family protein / ... 31 0.24
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 31 0.24
At5g28810.1 68418.m03542 hypothetical protein 30 0.32
At5g40550.1 68418.m04921 expressed protein 29 0.55
At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7) ident... 29 0.96
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 28 1.3
At1g50410.1 68414.m05650 SNF2 domain-containing protein / helica... 28 1.3
At1g19980.1 68414.m02503 cytomatrix protein-related contains wea... 28 1.3
At5g04590.1 68418.m00458 sulfite reductase / ferredoxin (SIR) id... 27 2.2
At1g09730.1 68414.m01092 Ulp1 protease family protein low simila... 27 2.2
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 27 2.2
At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family pr... 27 2.9
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 27 2.9
At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related... 27 2.9
At3g12560.1 68416.m01563 telomeric DNA-binding protein, putative... 27 2.9
At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta... 27 2.9
At5g56890.1 68418.m07099 protein kinase family protein contains ... 27 3.9
At5g28646.1 68418.m03507 wave-dampened2 (WVD2) nearly identical ... 27 3.9
At5g23570.1 68418.m02765 XS domain-containing protein / XS zinc ... 27 3.9
At5g16630.1 68418.m01947 DNA repair protein Rad4 family low simi... 27 3.9
At3g24255.1 68416.m03045 expressed protein 27 3.9
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 27 3.9
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 27 3.9
At1g32880.1 68414.m04051 importin alpha-1 subunit, putative simi... 27 3.9
At5g63320.1 68418.m07946 expressed protein 26 5.1
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 26 5.1
At5g37140.1 68418.m04458 tRNA-splicing endonuclease positive eff... 26 5.1
At4g01590.1 68417.m00207 expressed protein 26 5.1
At2g27410.1 68415.m03312 hypothetical protein contains Pfam prof... 26 5.1
At1g76920.1 68414.m08954 F-box family protein (FBX3) contains si... 26 5.1
At1g03320.1 68414.m00311 hypothetical protein 26 5.1
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 26 6.8
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 26 6.8
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 26 6.8
At4g11050.1 68417.m01796 endo-1,4-beta-glucanase, putative / cel... 26 6.8
At4g00550.1 68417.m00076 UDP-galactose:MGDG galactosyltransferas... 26 6.8
At3g23910.1 68416.m03004 expressed protein 26 6.8
At3g02930.1 68416.m00288 expressed protein ; expression support... 26 6.8
At2g10975.1 68415.m01173 hypothetical protein 26 6.8
At1g78030.1 68414.m09093 expressed protein 26 6.8
At1g23210.1 68414.m02902 glycosyl hydrolase family 9 protein sim... 26 6.8
At5g66410.1 68418.m08376 expressed protein 25 9.0
At5g15380.1 68418.m01799 cytosine methyltransferase, putative si... 25 9.0
At5g01225.1 68418.m00028 hypothetical protein 25 9.0
At4g24200.1 68417.m03474 expressed protein hypothetical protein ... 25 9.0
At3g52820.1 68416.m05820 purple acid phosphatase (PAP22) identic... 25 9.0
At3g02020.1 68416.m00164 aspartate kinase, lysine-sensitive, put... 25 9.0
At3g01410.1 68416.m00064 RNase H domain-containing protein low s... 25 9.0
At2g34300.1 68415.m04196 dehydration-responsive protein-related ... 25 9.0
At1g77620.1 68414.m09037 expressed protein 25 9.0
At1g70070.1 68414.m08062 DEAD/DEAH box helicase, putative simila... 25 9.0
At1g66190.1 68414.m07513 expressed protein ; expression supporte... 25 9.0
At1g50750.1 68414.m05707 expressed protein 25 9.0
At1g33500.1 68414.m04146 hypothetical protein 25 9.0
At1g32850.1 68414.m04048 ubiquitin carboxyl-terminal hydrolase f... 25 9.0
>At5g22400.1 68418.m02613 rac GTPase activating protein, putative
similar to rac GTPase activating protein 1 [Lotus
japonicus] GI:3695059; contains Pfam profile PF00620:
RhoGAP domain
Length = 466
Score = 34.3 bits (75), Expect = 0.019
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 21 IKNEKNSTFSKEEESRVITENNETK-KIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNK 79
I+N +N + S E + ENN + + DFG+ + DSS+ V+ NL + V +
Sbjct: 386 IENAENQSSSSEISDELTLENNACEQRETDFGKYRTGRLSDSSQQVVLNLDPPAQWPVGR 445
Query: 80 AKG 82
KG
Sbjct: 446 TKG 448
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 32.3 bits (70), Expect = 0.078
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 23 NEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKG 82
+EK T KE E + +N ET+K+ + E+T D + N+ + +
Sbjct: 62 DEKAETEDKESEVKKNEDNAETQKMEEKVEVTK----DEGQAEATNMDEDADGKKEQTDD 117
Query: 83 GVLLKSSDQNMNLTDDDDPYVKND 106
GV ++ + N+ D+ Y K+D
Sbjct: 118 GVSVEDTVMKENVESKDNNYAKDD 141
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.5 bits (68), Expect = 0.14
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 22 KNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLK----SQSSKSV 77
K KNS K+EE + NNE KK D + T+K + K ++ K S+ S S
Sbjct: 949 KESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASK 1008
Query: 78 NKAK 81
N+ K
Sbjct: 1009 NREK 1012
>At1g69610.1 68414.m08006 expressed protein
Length = 636
Score = 31.1 bits (67), Expect = 0.18
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 16 NIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFG-ELTSKF---KGDSSKHVLRNLKS 71
+IVG ++ K +F E S + + E KK+V F E TS K +S + ++K
Sbjct: 112 SIVGFVEEPKAFSFKFHEYSAITVQEEEKKKMVSFSDEKTSSMVLEKSESDGFMKEHVKE 171
Query: 72 QSSKSVNKAKGGVLLKSSDQNM-----NLTDDDDPYVK 104
+ + G + +N+ NL DDDD +++
Sbjct: 172 EMLVYEFMSCGVLKESLVHENLVGGEDNLFDDDDGFIE 209
>At4g09950.1 68417.m01628 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains
Pfam PF04548: AIG1 family;
Length = 336
Score = 30.7 bits (66), Expect = 0.24
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 16 NIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSK 75
N+V I + N + S + EN T K + + + KG SSK + +K + K
Sbjct: 198 NLVEQISKKNNGKSYMADLSHELRENEATIK--EKQKQIEEMKGWSSKQEISQMKKELEK 255
Query: 76 SVNKAKGGVLLKSSDQNMNLTDD 98
S N+ G+ K S+Q +D
Sbjct: 256 SHNEMLEGIKEKISNQLKESLED 278
>At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1939
Score = 30.7 bits (66), Expect = 0.24
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 9 KNTVTYDNIVGLIKN--EKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVL 66
+N + ++ L KN + + S+ +E R T ++ + D + KG SKH
Sbjct: 1719 ENVMEQNHSENLPKNFPKPDKQHSRRKEQRAETSSDRKLRKTDGDVVPISSKGSESKHTR 1778
Query: 67 RNLKSQSSKSVNKAKGGVLLKSSDQNMNLTDDDDPYVK 104
RN K ++S K +S++ + + + +K
Sbjct: 1779 RNAKEEASSQREKLVASCEKVTSEETLRRSHEKKEKMK 1816
>At5g28810.1 68418.m03542 hypothetical protein
Length = 560
Score = 30.3 bits (65), Expect = 0.32
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 20 LIKNEKNSTFSKEEESRVITEN----NETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSK 75
++K NS +KE ++V+T+ ++ KKI+ E K K + K V++ K SSK
Sbjct: 430 VVKKAVNSVKNKEAGTKVLTKKKVAKSDKKKIIVNVEKVGKPKPEMKKTVVKVEKVDSSK 489
Query: 76 SVNKAKGGV-LLKSSDQN-MNLTD 97
K G K+ D + +++TD
Sbjct: 490 PEKKKSGAAPTTKTFDDDVVDVTD 513
>At5g40550.1 68418.m04921 expressed protein
Length = 273
Score = 29.5 bits (63), Expect = 0.55
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 16 NIVGLIKNEKNSTFSKEEESRVITENNET-KKIVDFGELTSKFKGDSSKHVLRNLKSQSS 74
+IVG+++N K ++++ V+ E N+ KK+ E+ K GD S L+NL Q+
Sbjct: 5 DIVGILENTKELDRLRKDQEEVLVEINKMHKKLQASPEIVEK-PGDISLAKLKNLYIQAK 63
Query: 75 K 75
+
Sbjct: 64 E 64
>At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7)
identical to COP1-Interacting Protein 7 (CIP7)
GI:3327868 from [Arabidopsis thaliana]
Length = 1058
Score = 28.7 bits (61), Expect = 0.96
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 22 KNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAK 81
K +KN SK++ES ++N+ T+ + G ++ K S K V+RN+ +SK N AK
Sbjct: 345 KKKKNKKKSKQDESAEPSDNSSTETESEDG---NEGKKQSRKVVIRNINYITSKR-NGAK 400
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 21 IKNE-KNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNK 79
+K E K +E+E + E+++ +K+ + E K KGD K ++ +S K
Sbjct: 339 VKEEGKERVEEEEKEKEKVKEDDQKEKVEE--EEKEKVKGDEEKEKVKEEESAEGKKKEV 396
Query: 80 AKG 82
KG
Sbjct: 397 VKG 399
>At1g50410.1 68414.m05650 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 981
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 40 ENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQNMNLTDDD 99
+N+ K + GE F K VL L+S S++ + + + SS Q N DDD
Sbjct: 749 DNSHDKSVFQNGE----FSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPNDDDDD 804
Query: 100 D 100
D
Sbjct: 805 D 805
>At1g19980.1 68414.m02503 cytomatrix protein-related contains weak
similarity to CAST1 [Rattus norvegicus]
gi|22138113|gb|AAL07517
Length = 342
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/79 (18%), Positives = 33/79 (41%)
Query: 7 KLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVL 66
K+ + ++Y + EK+ T S+ + E N TKK + +LT +
Sbjct: 203 KISSLISYQEQLQSSNQEKDETISRLKAKMAEMETNSTKKDEEISKLTRDLESAKKSRGF 262
Query: 67 RNLKSQSSKSVNKAKGGVL 85
+ ++ +K ++ G +
Sbjct: 263 TPVLTRCTKLEKRSNGNTV 281
>At5g04590.1 68418.m00458 sulfite reductase / ferredoxin (SIR)
identical to sulfite reductase [Arabidopsis thaliana]
GI:804953, GI:2584721
Length = 642
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 67 RNLKSQSSKSVNKAKGGVLLKSSDQNMNLTDDDDPYVKNDNILA 110
+NLK+ S S+ K G L D N N+ PYVK D + A
Sbjct: 178 QNLKTVMS-SIIKNMGSTLGACGDLNRNVLAPAAPYVKKDYLFA 220
>At1g09730.1 68414.m01092 Ulp1 protease family protein low
similarity to SP|Q9GZR1 SUMO-1-specific protease 1 (EC
3.4.22.-) (Sentrin-specific protease SENP6) (Protease
FKSG6) {Homo sapiens}; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 984
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 32 EEESRVITENNETKKIVDFG-ELTSKFKGDSSKHVLRNL 69
E++S ++TE E++ I+ FG E T + ++HV + L
Sbjct: 78 EDDSTLVTEAKESRTILTFGLETTDHLEETDAEHVNQGL 116
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 23 NEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSK 63
+EKN F EEE R +N E K++ D E + D +K
Sbjct: 183 DEKNKKFRAEEEMREKIDNKE-KEVHDLKEKIKSLESDVAK 222
>At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain, weak hit to PF01661: Appr-1-p
processing enzyme family
Length = 912
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 11 TVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLK 70
T ++ + +++++ S K ++++ E K + E K+KG K V NL+
Sbjct: 640 TSLFEGFLSVVQDQ--SKLPKRSSQTAVSDSGEDIK--EDSERNKKYKGSQDKAVTNNLE 695
Query: 71 SQS 73
S+S
Sbjct: 696 SES 698
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 23 NEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKS 76
NEK + + EE + N E++K+VD E ++ + ++ + N K + S
Sbjct: 121 NEKEAEGTGNEEGNEDSNNGESEKVVDESEGGNEISNEEAREI--NYKGDDASS 172
Score = 25.4 bits (53), Expect = 9.0
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 22 KNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAK 81
K + +EEE + + ENNE + E T +G+ + +S K V++++
Sbjct: 101 KENGDEIVEREEEEKAVEENNEKE-----AEGTGNEEGNEDSN-----NGESEKVVDESE 150
Query: 82 GGVLLKSSD-QNMNLTDDD 99
GG + + + + +N DD
Sbjct: 151 GGNEISNEEAREINYKGDD 169
>At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related
similar to storekeeper protein GI:14268476 [Solanum
tuberosum]
Length = 328
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 1 MDEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGD 60
M+ FF+KLK++++++ N+ S K E++ T ++ KK + E+ GD
Sbjct: 180 MNGFFEKLKDSISFEVKTDQFVNKIRSMKRKYIENKKTTTEHD-KKCYELAEIIWVSDGD 238
Query: 61 SS 62
++
Sbjct: 239 AT 240
>At3g12560.1 68416.m01563 telomeric DNA-binding protein, putative
similar to telomeric DNA-binding protein 1 [Arabidopsis
thaliana] gi|13641340|gb|AAK31590
Length = 619
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 26 NSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSK 75
N ++++ + ++ +K + +L++KFK S + R KS SSK
Sbjct: 202 NGSYARHGNHTNLGRKDDDEKFYSYHKLSNKFKSYRSPTIRRIRKSMSSK 251
>At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta
antigen-related contains weak similarity to C protein
immunoglobulin-A-binding beta antigen [Streptococcus
agalactiae] gi|18028989|gb|AAL56250
Length = 731
Score = 27.1 bits (57), Expect = 2.9
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 24 EKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKS 76
+ +S +EEE +E+N TK V L+S+ SS + S SS S
Sbjct: 249 DSSSETDEEEEENQDSEDNNTKDNVTVESLSSEDPSSSSSSSSSSSSSSSSSS 301
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 33 EESRVITENNETKKIVDFGELTSKFKGDSSKHV-LRNLKSQSSKSVNKAKGGVLLKSSD 90
+ S ++ EN+ T K+ DFG + + ++H+ R + + + A G LL SD
Sbjct: 851 KSSNILLENDFTPKVSDFGLARNALDDEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSD 909
>At5g28646.1 68418.m03507 wave-dampened2 (WVD2) nearly identical
to WAVE-DAMPENED2 [Arabidopsis thaliana] GI:28453880
Length = 293
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 24 EKNSTFSKEEESRVITENNETKKIVD 49
E+NS + S VITEN+ KK +D
Sbjct: 38 EENSLSQNHKSSNVITENDSKKKNLD 63
>At5g23570.1 68418.m02765 XS domain-containing protein / XS zinc
finger domain-containing protein-related contains Pfam
profiles PF03468: XS domain, weak hit to PF03470: XS
zinc finger domain
Length = 625
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/85 (18%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 33 EESRVITENNETKKIVDFGELTS--KFKGDSSK--HVLRNLKSQSSKSVNKAKGGVLLKS 88
E++R++ + + + + E+ + +F DS K H R+ K ++ + + + + ++
Sbjct: 481 EDNRIVRQRTKMQHEQNREEMDAHDRFFMDSIKQIHERRDAKEENFEMLQQQERAKVVGQ 540
Query: 89 SDQNMNLTDDDDPYVKNDNILAFLD 113
QN+N + +DD + + + +F++
Sbjct: 541 QQQNINPSSNDDCRKRAEEVSSFIE 565
>At5g16630.1 68418.m01947 DNA repair protein Rad4 family low
similarity to SP|Q01831 DNA-repair protein complementing
XP-C cells (Xeroderma pigmentosum group C complementing
protein) {Homo sapiens}; contains Pfam profile PF03835:
DNA repair protein Rad4
Length = 865
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 30 SKEEESRVITENNETKKIVDFGELTSKFKGDSS 62
+ E S+++ N++ KK+ DF + + KG SS
Sbjct: 611 ANEVPSKILKRNSKFKKVKDFEDGDNNIKGGSS 643
>At3g24255.1 68416.m03045 expressed protein
Length = 836
Score = 26.6 bits (56), Expect = 3.9
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 25 KNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGV 84
+N S E ES ++E E +++ L S + +L +L S SS+ V K+K
Sbjct: 498 RNELQSVEAESAKVSE--EIERLSQSHALDSSRLQRDLEGLLLSLDSMSSQDVEKSKENQ 555
Query: 85 LLKSSDQNMNLTDDD 99
SS + + DDD
Sbjct: 556 PSSSSMEVCEVIDDD 570
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 26.6 bits (56), Expect = 3.9
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 14/87 (16%)
Query: 21 IKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKA 80
++ + N + K+ V T+ + +IV+ K KGDS +K KS K
Sbjct: 703 LRQDSNKPYGKDLSDEVSTDRS---RIVE--TKGGKEKGDSQNDSKDRMKENDLKSAEKV 757
Query: 81 KGGVLLKSSDQNMNLTDDDDPYVKNDN 107
KG + N T DP+VK D+
Sbjct: 758 KG------VESNKKST---DPHVKKDS 775
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 26.6 bits (56), Expect = 3.9
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 14/87 (16%)
Query: 21 IKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKA 80
++ + N + K+ V T+ + +IV+ K KGDS +K KS K
Sbjct: 673 LRQDSNKPYGKDLSDEVSTDRS---RIVE--TKGGKEKGDSQNDSKDRMKENDLKSAEKV 727
Query: 81 KGGVLLKSSDQNMNLTDDDDPYVKNDN 107
KG + N T DP+VK D+
Sbjct: 728 KG------VESNKKST---DPHVKKDS 745
>At1g32880.1 68414.m04051 importin alpha-1 subunit, putative
similar to importin alpha-1 subunit (Karyopherin
alpha-1 subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 183
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 1 MDEFFKKLKNTVTYDNIVGLIKNEKNSTFSKEEES 35
+DE F KL++ + + I L+K +N+ F ++ES
Sbjct: 34 LDESFPKLQSVIDANLIPTLVKLTQNAEFDMKKES 68
>At5g63320.1 68418.m07946 expressed protein
Length = 569
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 18 VGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKF--KGDSSKHVLRNLKSQSSK 75
+ I+ E+ E+ESRV + + +VD GE S+ KG + N +
Sbjct: 465 INKIEGEEQLANVPEQESRVTEKEEQETGVVDLGEQKSEVVEKGVEENEAVDNGEGVQGT 524
Query: 76 SVNKAKGG 83
V+ KGG
Sbjct: 525 EVSD-KGG 531
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 7 KLKNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVL 66
K K + G +NE + ++E + + +E+KK GE T K +S+K
Sbjct: 704 KAKQKAEEIEVTGKEENETDKHGKMKKERK--RKKSESKKEGGEGEETQKEANESTKKER 761
Query: 67 RNLKSQSSK 75
+ KS+S K
Sbjct: 762 KRKKSESKK 770
>At5g37140.1 68418.m04458 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 692
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 8 LKNT-VTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSK-FKGDSSK 63
L+NT Y++ V L+K + + E++ + + + KI+ FGE K F G S +
Sbjct: 212 LENTEAKYEHYVHLLKEVERMSEEAEKKKKGADKKPKAIKILTFGEFVKKTFDGFSEE 269
>At4g01590.1 68417.m00207 expressed protein
Length = 200
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 39 TENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSS-DQNMNLTD 97
++ + +K+ F +L +KFK + + + + + V +++G DQN + D
Sbjct: 127 SQEADLQKLDVFEKLEAKFKVEGKEE---KEEGEDDEEVVESEGEESDNGDYDQNQDFDD 183
Query: 98 DDDPYVKNDN 107
DDD Y D+
Sbjct: 184 DDDDYNNEDD 193
>At2g27410.1 68415.m03312 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 309
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 22 KNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVL 66
K K F E+E+R+I EN KI D G + + +KHVL
Sbjct: 163 KQVKTPDFLTEDETRIIHEN--AMKIRDNGVPVNFVDPELNKHVL 205
>At1g76920.1 68414.m08954 F-box family protein (FBX3) contains
similarity to stamina pistilloidia GI:4101570, the pea
ortholog of Fim and UFO from [Pisum sativum]
Length = 374
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 4 FFKKLKN-TVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKF 57
F KL N T+T+ N V L K+E F + R++ N ++K ++ G L S F
Sbjct: 225 FSCKLTNLTITHTNWVCLEKHEWGDIFDIIKRPRLLRGNGDSKLLM-IGGLKSTF 278
>At1g03320.1 68414.m00311 hypothetical protein
Length = 220
Score = 26.2 bits (55), Expect = 5.1
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 22 KNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAK 81
KNE ++ + +++N KK + GE S K +K+VLR + S+K K K
Sbjct: 21 KNEDEPDEEDVKQKQKVSKNENPKKDSN-GEKGSDEKDKKNKNVLRWPQDSSTK---KEK 76
Query: 82 GGVLLKSSDQN 92
G SS++N
Sbjct: 77 GDGKNLSSEEN 87
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 37 VITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQNMNLT 96
++T + ++VD +L KFKG RN SQ S S+ ++ S D N+ +
Sbjct: 618 LVTSADSRTRVVDGVDLVHKFKG------FRNTNSQISASLTSNGKFLVSASEDSNVYVW 671
Query: 97 DDD 99
+ D
Sbjct: 672 NYD 674
>At5g05210.1 68418.m00555 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 386
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/63 (20%), Positives = 29/63 (46%)
Query: 21 IKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKA 80
++ EK+ T +++S+ T+NN E + + D L+ + + +++
Sbjct: 121 LEQEKSGTELPDDDSKKETDNNRLNDDDSKEETDNNRQKDDRSVTYEELRERLHRKIDEL 180
Query: 81 KGG 83
KGG
Sbjct: 181 KGG 183
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 25.8 bits (54), Expect = 6.8
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 25 KNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGV 84
+N S E+E I E+ E VD + ++ G SSK + SS V++ G
Sbjct: 39 RNVEGSNEDEEEEIEEDGEEISEVDHAKAVAEALGKSSK----SKAVSSSMEVDEVSQG- 93
Query: 85 LLKSSDQNMNLTDDDD 100
LK D + N ++DD
Sbjct: 94 -LKELDMD-NYDEEDD 107
>At4g11050.1 68417.m01796 endo-1,4-beta-glucanase, putative /
cellulase, putative similar to endo-beta-1,4-glucanase
GI:4972236 from [Fragaria x ananassa]
Length = 626
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 51 GELTSKFKGDSSK--HVLRNLKSQSSKSVNKAKGGVLLKSSDQNM 93
GE T+ F+ K + +L +S+K++ K GG++ + S NM
Sbjct: 298 GEHTAVFERYQQKAEQFMCSLLGKSTKNIKKTPGGLIFRQSWNNM 342
>At4g00550.1 68417.m00076 UDP-galactose:MGDG galactosyltransferase 2
/ digalactosyldiacylglycerol synthase 2 (DGD2) identical
to digalactosyldiacylglycerol synthase (DGD2)
GI:18141112 [Arabidopsis thaliana]
Length = 473
Score = 25.8 bits (54), Expect = 6.8
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 2 DEFFKKLKNTVTYDNIVGLIK------NEKNSTFSKEEESRVITENNETKKIVDFGELTS 55
++FFK+ N TYD+ G ++ E+ S + E++ ++ T++ + +L
Sbjct: 337 NKFFKQFPNCRTYDDGQGFVRATLKALGEQPSQLT-EQQRHELSWEAATQRFIKVSDLNR 395
Query: 56 KFKGDSSKHVLRNLKSQSSKSVNK 79
+ DS+ R++ + SS SV K
Sbjct: 396 LSRADSNLS-KRSVFASSSISVGK 418
>At3g23910.1 68416.m03004 expressed protein
Length = 421
Score = 25.8 bits (54), Expect = 6.8
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 25 KNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGV 84
+N S E ES ++E E + + +S+ + D + +L +L S SS+ V K+K
Sbjct: 83 RNELQSVEAESAKVSEEIE-RLSQSHAQDSSRLQRDL-EGLLLSLDSMSSQDVEKSKENQ 140
Query: 85 LLKSSDQNMNLTDDD 99
SS + + DDD
Sbjct: 141 PSSSSMEVCEVIDDD 155
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 25.8 bits (54), Expect = 6.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 24 EKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGG 83
EK F KE E E +VD + TS G + + L K + K K G
Sbjct: 739 EKKEVFHKESAK----EEEEDLNVVDQSQKTSPVNGLTGEDELLKEKEKKKKKTLFGKVG 794
Query: 84 VLLK 87
LLK
Sbjct: 795 NLLK 798
>At2g10975.1 68415.m01173 hypothetical protein
Length = 133
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 28 TFSKEEESRVITENNETKKIVDFGELTSKFK-GDSSKHVLRNL 69
T E +++I E KK+ F ELT K D SK +L+ L
Sbjct: 84 TMMHSETNQLIKEKTHAKKMKMFIELTEKENLDDKSKKLLQQL 126
>At1g78030.1 68414.m09093 expressed protein
Length = 223
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 9 KNTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIV 48
KN+V +++G N + + F +RV++ N E + ++
Sbjct: 36 KNSVRVGSVIGFKINSELNRFFSVNSNRVVSINRENRSVM 75
>At1g23210.1 68414.m02902 glycosyl hydrolase family 9 protein
similar to endo-1,4-beta-glucanase GB:CAA67157
GI:2440035 from (Arabidopsis thaliana)
Length = 489
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 52 ELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQNM 93
E FK ++ + + L S V ++GG+L+KS NM
Sbjct: 298 EYFQSFKQNADEFICSLLPGISHPQVQYSQGGLLVKSGGSNM 339
>At5g66410.1 68418.m08376 expressed protein
Length = 230
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 50 FGELTSKFKGDSSKHVLRNLKSQSSKSVNK 79
FG + + D K VL N K+Q S+ VN+
Sbjct: 15 FGNVLAAAARDYKKEVLANEKAQGSRPVNE 44
>At5g15380.1 68418.m01799 cytosine methyltransferase, putative
similar to cytosine methyltransferase [Arabidopsis
thaliana] GI:7658293; contains Pfam profile PF00627:
UBA/TS-N domain
Length = 624
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
Query: 59 GDSSKHVLRNLKSQSSKSVNKAKGGVLL--------KSSDQNMNLTDDDD 100
G +HV++ ++ + V + +L +S D N+N+ DDDD
Sbjct: 121 GFPEEHVIKAMQEHGDEDVGEITNALLTYAEVDKLRESEDMNININDDDD 170
>At5g01225.1 68418.m00028 hypothetical protein
Length = 134
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 43 ETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVN 78
+T + + FG + +K SS +V +L SKS+N
Sbjct: 65 KTFRYISFGRMNTKTTPSSSSNVSSSLYLMKSKSLN 100
>At4g24200.1 68417.m03474 expressed protein hypothetical protein -
Arabidopsis thaliana,PIR2:T06677
Length = 1000
Score = 25.4 bits (53), Expect = 9.0
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 12 VTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKS 71
V+ D+IV ++ EKNS +S +++ N + I +++ + +
Sbjct: 339 VSSDSIVASMELEKNSLLQSSLDSNEVSK-NVSGTICGSHDVSVAHNSKQVSSLTHMTDN 397
Query: 72 QSSKSVNKAKGGVLLKSSDQNMNLTDDDDPYVKND 106
Q S + ++ GG+ ++ NLT D K+D
Sbjct: 398 QDSDNSSRLSGGLGRSRKFESDNLTGLADNEGKDD 432
>At3g52820.1 68416.m05820 purple acid phosphatase (PAP22)
identical to purple acid phosphatase (PAP22)GI:20257494
from [Arabidopsis thaliana]
Length = 434
Score = 25.4 bits (53), Expect = 9.0
Identities = 8/25 (32%), Positives = 18/25 (72%)
Query: 38 ITENNETKKIVDFGELTSKFKGDSS 62
ITE+N+ + +V++G+ K+ G ++
Sbjct: 65 ITEDNKVESVVEYGKQPGKYDGKAT 89
>At3g02020.1 68416.m00164 aspartate kinase, lysine-sensitive,
putative similar to aspartate kinase gi:2257743
(Arabidopsis thaliana)
Length = 559
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 10 NTVTYDNIVGLIKNEKNSTFSKEEESRVITENNETKKIVDFG----ELTSKFKGDSSKHV 65
N + + +I+ LI N + S+F E+ RV+ N +++ G ++ D ++H
Sbjct: 471 NLLRHRSIISLIGNVQRSSFILEKGFRVLRTNGINVQMISQGASKVNISLIVNDDEAEHC 530
Query: 66 LRNLKS 71
++ L S
Sbjct: 531 VKALHS 536
>At3g01410.1 68416.m00064 RNase H domain-containing protein low
similarity to GAG-POL precursor [Oryza sativa (japonica
cultivar-group)] GI:5902445; contains Pfam profile:
PF00075 RNase H
Length = 294
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 52 ELTSKFKGDSSKHVLRNLKSQSSKSVNKA 80
EL + FK KH+ R S++ K N A
Sbjct: 252 ELMNSFKTFDIKHIAREKNSEADKQANSA 280
>At2g34300.1 68415.m04196 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 22 KNEKNSTFSKEEESRVITENNETK 45
++ KN + K EE+ TENN+ K
Sbjct: 71 RDPKNFSDEKNEENEAATENNQVK 94
>At1g77620.1 68414.m09037 expressed protein
Length = 1151
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 67 RNLKSQSSKSVNKAKGGVLLKSSDQNMNLTDD 98
R L S + KAKG V+L ++D+N L D+
Sbjct: 493 RGLVSAIQQIAVKAKGPVVLTANDKNHGLPDN 524
>At1g70070.1 68414.m08062 DEAD/DEAH box helicase, putative similar
to SP|P35207 Antiviral protein SKI2 {Saccharomyces
cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 1171
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 61 SSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQNMNLTDDDDPYVK 104
S+KH L L + +VN+ L+ S DDDD Y K
Sbjct: 343 STKHSLLPLLDEKGINVNRKLSLNYLQLSASEARFRDDDDGYRK 386
>At1g66190.1 68414.m07513 expressed protein ; expression supported
by MPSS
Length = 270
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 34 ESRVITENNETKKIVDFGELTSKFKGDSSKHVLRNLKSQSSKSVNK 79
E+RV+ EN + +F+GD + R L + +K+++K
Sbjct: 95 ENRVLAENRVSSTKSPLWYTNYQFRGDQETYYSRLLDTYETKNISK 140
>At1g50750.1 68414.m05707 expressed protein
Length = 816
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 50 FGELTSKFKGDSSKHVLRNLKSQSSKSVNKAKGGVLLKSSDQNMNLTDDDD 100
F E + K + LK++ KS+ + ++ MN+TDD +
Sbjct: 367 FPEFQTSSKDKDANESAETLKARDRKSLGADTSSKMNRTRKDEMNITDDSN 417
>At1g33500.1 68414.m04146 hypothetical protein
Length = 254
Score = 25.4 bits (53), Expect = 9.0
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 42 NETKKIVDFGELTSKFKGDSSKHVL---RNLKSQSSKSVNKAKG-GVLLKSSDQ-NMNLT 96
+ETK++ + + ++ +G+ H+L R + S S SVN A+ ++L+ D + L
Sbjct: 48 SETKRLKEETDQKTRTRGEICSHILEKQRKISSMESDSVNIAQSLELILQERDSLSAKLV 107
Query: 97 DDDDPYVK 104
Y+K
Sbjct: 108 SKRSNYLK 115
>At1g32850.1 68414.m04048 ubiquitin carboxyl-terminal hydrolase
family protein similar to ubiquitin-specific protease
UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 892
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 27 STFSKEEESRVITE-NNETKKIVDFGEL 53
S+++ EEE R++TE NNE + + G L
Sbjct: 15 SSYTPEEERRIVTELNNEAEADLKEGNL 42
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.307 0.127 0.333
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,701,688
Number of Sequences: 28952
Number of extensions: 100816
Number of successful extensions: 416
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 383
Number of HSP's gapped (non-prelim): 65
length of query: 113
length of database: 12,070,560
effective HSP length: 72
effective length of query: 41
effective length of database: 9,986,016
effective search space: 409426656
effective search space used: 409426656
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 53 (25.4 bits)
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